Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0373 ATGGATTTATCTTGTAATATTTGGAAACAAAATGTGTTTAGTGAAAGAACGTATTGCAAGACATTGGACCAATTTGGTCATAGCAATGTGCTCAGAAGTAGAATTATTGATGCCAAGTTGATCGGTGGTTCAAGAGTAATGTATAAAGTGCCTAAGAAGAGAAACAGATTTATAGCTTCCAGCAATTCCAATAATTTGAGTCTGGTTTGTGCTAGAAAGTTTGACAGTGTTTTGCAAATTTTTAAGCACAAGAGATTCTTTAACTGTACCAATAAGATCAATGGTCGAAGGATGGGGATGGTTCACTCAGAGTGTCAAGGCAATGATTCTTTAGCATTTATTGATGGAAATGGCAGAAATGTTGAATATGTAGACAATGGTGATGAAAGCTCCAGTTCTGGGCCTACTGATGGTGTAGGGTCAGATGGTTCCAGAGAAGCTGGTGGAGAATTAGAAGCGGCAGAAACGGATGCACCGACTGTGGACGAGCTTAGAGAATTGCTGCAGAAGGCTATGAAAGAACTGGAAGTTGCAAGACTTAATAGTACCATGTTTGAGGAGAAGGCCCAGAAAATATCTGAAGCTGCAATAGCCTTGCAAGATGAAGCAGCCCATGCTTGGAATGATGTGAACTCTACTCTCGATTCTGTACAACAGATAGTGAATGAAGAATATGCTGCCAAAGAAGCTGTTCAAAAAGCTACCATGGCTCTTTCATTAGCAGAGGCAAGGCTTCAGGTGGCAATAGAGTCATTGGAGCAGGAAAAAGGAGGAAATGATTCTCCGGAAACTGCAATAGTTAGTGAGCGGGAGATTGATTGTAAGGAAGAGGAAGAAGTGTTGTTGATTGCTAAGGAGGATATCAAAGAATGCCGGGAAAATTTGGAAAACTGTGATTCAGAATTGAAGCGTTTACAGAGTATAAAGGAAGAGTTGCAGAAAGAAGTGGATAGGTTGAATGAGTTGGCTGAAACAGCACAGCTAAATGCATTGAAAGCTGAAGAGGATGTGGCAAATATAATGCTTTTGGCCGAGCAGGCTGTTGCTTTTGAACTTGAGGCTGCCCAAAGGGTCAGTGATGCTGAAATAGCATTACAGAAATTGGAGAAGTCTTCATCAAATTCGTTTGTTGATGTTTCGGAAACCACACAGGGGTTAAATGTTATCGAAGAAGTTGTAAATGAGGAAAATAAGGCAGTCATAGGAATTTCTGGTGATATTGCTGTTGAAATGGATAGGGATGTGGCATTTAGTGCTGATTCCTTAGCTGTCAAATCTCTACCGGGTACCTTTTCAGATTCTGAAGATTCGGATCAACCATATTACTTGAGTGATAATGAGAATGGAAAATTGAGTTCAGACTCCTTAAAGGAGGTTGAATCTGGAGCAGAAAAGTCTATTTTGAGTCAAGCAAAAAAGCAGGAAACACAGAAGGATTTGACCAGAGAAGGCTCACCCTTAAATGCCCCCAAGGCTCTATTGAAAAAGTCGTCACGCTTTTTTTCAGCGTCATTTTTCTCTTTTACAGGTGATGGGACAGAGTTCACTCCAGCATCAGTATTCCAGGGTCTCCTGGATTCCACAAAAAAGCAATTGCCGAAGCTAGTTGTTGGATTAGTTCTGTTAGGAACGGGGATCACTATCTTTGCTACTCGAGCTGAAAGGAATTATCAGATGTTTCAGCAGCCTGATGTCATCACCACTAGCACCGATGAAGTTTCCTTGAATACAAAACCTTTATTTCAACAATTAAGGAAACTTCCTAAAAGAGTGAAAGAGTTAATTTCCAAGCTTCCCCATCAAGAGGCATGTTCTCAGGAGGCTTCTCTCTTAGACATGCTATGGCTGTTGCTTGCTAGTGTTATATTTGTGCCAACATTCCAGAAACTTCCTGGAGGAAGTCCTGTCCTTGGGTACTTGGCTGCTGGAATTTTAATTGGGCCATATGGTCTCTCCATAATCCGTCACGTGCATGGAACAAAAGCAATTGCTGAATTTGGAGTTGTTTTTCTCCTGTTCAACATTGGCCTTGAGTTATCAGTTGAGAGGCTAAGTTCCATGAAGAAATATGTTTTTGGGTTAGGGTCTGCACAGGTTTTGGTTACAGCTGTAGTGGTTGGCTTAGTCGCTCATATTGTCTGTGGGCAGCCTGGTCCAGCAGCAATTGTCATTGGAAATGGTTTGGCTTTGTCATCCACTGCTGTTGTTCTTCAGGTGTTGCAAGAGCGAGGTGAGAGCACATCACGACATGGACGTGCCACATTTTCTGTCCTACTATTCCAGGACTTGGCTGTTGTGGTTTTGCTGATTCTCATACCTCTAATTTCACCTAACTCATCAAAAGGAGGGATTGGTTTTCAAGCCATTGCTGAAGCTCTTGGCCTGGCTGCTGTTAAGGCAATAGTTGCCATTTCTGCCATAATAGCTGGTGGGCGCCTGCTACTACGACCAATTTATAAACAAATAGCTGAAAATCAAAATGCAGAAATATTCTCCGCCAACACACTCCTTGTCATCCTTGGAACAAGTCTACTTACTGCCAGGGCTGGACTATCAATGGCACTGGGTGCCTTTCTAGCAGGTCTATTACTAGCAGAAACGGAATTCTCCTTGCAGGTTGAATCTGATATTGCTCCATATCGTGGCCTCCTATTGGGTCTCTTCTTCATGACGGTTGGGATGTCTATTGATCCAAAACTTCTTCTTTCAAACTTTCCAGTTATCTCGGGGTCTTTGGGACTTCTTATTGGTGGCAAGACTATATTGGTTGCCTTGGTTGGTAGGCTTTTTGGCATCTCAATTATATCTGCGTTAAGAGTTGGACTGCTTCTTGCTCCTGGTGGAGAATTTGCTTTTGTGGCATTTGGTGAAGCTGTCAATCAGGGTATAATGTCTTCTCACCTATCCTCCTTATTGTTTCTTGTTGTGGGAATTTCAATGGCCCTTACGCCGTGGCTAGCTGCTGGAGGTCAGTTAATTGCTTCTCGTTTTGAGCAGCATGATGTTCGGAGTTTATTACCTGTTGAAAGTGAGACCGATGATTTACAAGATCACATCATTATTTGTGGATTTGGACGAGTTGGTCAGATAATAGCCCAGCTTCTGTCCGAGCGACTGATACCTTTTGTTGCTCTTGATGTGAGGAGTGATAGAGTGGCAGTTGGACGTGCCCTAGACCTTCCTGTGTATTTTGGAGATGCGGGAAGTCGAGAGGTTCTTCATAAAGTTGGAGCTGAAAGGGCATGTGCTGCTGCAATAACTTTGGACTCACCGGGTGCAAATTACAGAACTGTTTGGGCTCTGAGCAAGTATTTCCCTAATGTTAAGACTTTCGTTCGAGCTCATGATGTTGATCATGGCCTTAATTTGGAGAAGGCTGGGGCTACCGCGGTAGTTCCAGAGACGTTGGAACCAAGCTTACAGTTGGCTGCTGCCGTTCTTGCTCAGGCTAAACTACCCATGTCAGAGATTGCTGCAACAATCAACGAGTTCCGATCTCGACATTTATCCGAGCTTACTGAGCTATGTGAAGCTAGCGGAAGTTCGCTCGGGTACGGGTTTTCTCGAATCATGAGTAAACCGAAAATTCAAACATCTGATTCTTCAGATGAGAACCAAGTCACTGAAGGAACACTGGCTATATGA 3645 42.91 MDLSCNIWKQNVFSERTYCKTLDQFGHSNVLRSRIIDAKLIGGSRVMYKVPKKRNRFIASSNSNNLSLVCARKFDSVLQIFKHKRFFNCTNKINGRRMGMVHSECQGNDSLAFIDGNGRNVEYVDNGDESSSSGPTDGVGSDGSREAGGELEAAETDAPTVDELRELLQKAMKELEVARLNSTMFEEKAQKISEAAIALQDEAAHAWNDVNSTLDSVQQIVNEEYAAKEAVQKATMALSLAEARLQVAIESLEQEKGGNDSPETAIVSEREIDCKEEEEVLLIAKEDIKECRENLENCDSELKRLQSIKEELQKEVDRLNELAETAQLNALKAEEDVANIMLLAEQAVAFELEAAQRVSDAEIALQKLEKSSSNSFVDVSETTQGLNVIEEVVNEENKAVIGISGDIAVEMDRDVAFSADSLAVKSLPGTFSDSEDSDQPYYLSDNENGKLSSDSLKEVESGAEKSILSQAKKQETQKDLTREGSPLNAPKALLKKSSRFFSASFFSFTGDGTEFTPASVFQGLLDSTKKQLPKLVVGLVLLGTGITIFATRAERNYQMFQQPDVITTSTDEVSLNTKPLFQQLRKLPKRVKELISKLPHQEACSQEASLLDMLWLLLASVIFVPTFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHIVCGQPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAIVAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVISGSLGLLIGGKTILVALVGRLFGISIISALRVGLLLAPGGEFAFVAFGEAVNQGIMSSHLSSLLFLVVGISMALTPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPMSEIAATINEFRSRHLSELTELCEASGSSLGYGFSRIMSKPKIQTSDSSDENQVTEGTLAI 1214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2533671 2548153 - MC05g0336 Mch5g0373 687792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0373 1214 Gene3D - 606 994 IPR038770 -
Mch5g0373 1214 FunFam K(+) efflux antiporter 2 chloroplastic 606 992 - -
Mch5g0373 1214 FunFam K(+) efflux antiporter 2 chloroplastic 1014 1178 - -
Mch5g0373 1214 ProSiteProfiles RCK N-terminal domain profile. 1018 1140 IPR003148 GO:0006813(InterPro)
Mch5g0373 1214 Coils Coil 274 336 - -
Mch5g0373 1214 Pfam TrkA-N domain 1019 1132 IPR003148 GO:0006813(InterPro)
Mch5g0373 1214 MobiDBLite consensus disorder prediction 124 159 - -
Mch5g0373 1214 Coils Coil 161 181 - -
Mch5g0373 1214 MobiDBLite consensus disorder prediction 124 139 - -
Mch5g0373 1214 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 325 1212 - GO:0009507(PANTHER)|GO:0015386(PANTHER)|GO:0016020(PANTHER)
Mch5g0373 1214 MobiDBLite consensus disorder prediction 428 487 - -
Mch5g0373 1214 MobiDBLite consensus disorder prediction 428 450 - -
Mch5g0373 1214 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 617 897 IPR004771 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)
Mch5g0373 1214 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1015 1157 IPR036291 -
Mch5g0373 1214 Gene3D - 1014 1178 - -
Mch5g0373 1214 Pfam Sodium/hydrogen exchanger family 620 987 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0853 Mch-Chr4:6052799 Mch5g0373 Mch-Chr5:2533671 8.05E-101 dispersed
Mch5g0373 Mch-Chr5:2533671 Mch6g0906 Mch-Chr6:6365817 3.34E-37 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0373 K03455 - csv:101213081 1936.38