Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g0403 | ATGATGGCATCAAGTTTGGGAGGAGCCACGATGTCGCAAACAGATGATTTCGAGGCGTCAACTCCAACCAATGATGTTGAGCCTCTAAAGAGGGCTTGGCGTAATGAAAAGGCTGCTCCTGAGATTCTACCCTTTGAGGCATCTTTGATTGGGAGAATCAAAGAGCAAATCCAATTAATGGAAGAAACTATAGAGGAATATTCAAGAAGTGGTATTGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTATTGAGATCATATATCAGGATTCGCTTACAGAAGATCGAGAAGTACATGCTCTATATGTTGAAGTCAGATGAACTTTTTGGACGCCTTTCTGAAGAAGAGAGAGTATTTGCTGAAAGGTGTTGTCATGATGTGAAATCTCATTTTGATGAGAGTGTTCTATCAAAATTGCCTAATAATTATCAGAGCATTTTGAGGCAATCTATAATAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGATACATTTGTGGTTTGCAAAAGTAAGGAATATCTGGAACATATACAGCTTGAGGATGAGGACGAGAGGGCATCTAGTAGACTAGAGGAACCTTTTGAGATGGAGGCCAATGTATTACACATTATTCGCTACAAGCCCATAAAATCACTTGTTGAGAGTGGGAGAATTGATTTGCTGTAG | 693 | 39.68 | MMASSLGGATMSQTDDFEASTPTNDVEPLKRAWRNEKAAPEILPFEASLIGRIKEQIQLMEETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYMLKSDELFGRLSEEERVFAERCCHDVKSHFDESVLSKLPNNYQSILRQSIISEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEDERASSRLEEPFEMEANVLHIIRYKPIKSLVESGRIDLL | 230 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 2762393 | 2768286 | + | MC05g0362 | Mch5g0403 | 687822 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g0403 | 230 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Mch5g0403 | 230 | Coils | Coil | 50 | 70 | - | - | |
| Mch5g0403 | 230 | SUPERFAMILY | GINS helical bundle-like | 21 | 155 | IPR036224 | - | |
| Mch5g0403 | 230 | Gene3D | - | 11 | 220 | - | - | |
| Mch5g0403 | 230 | CDD | GINS_A_Sld5 | 25 | 143 | IPR038749 | - | |
| Mch5g0403 | 230 | FunFam | DNA replication complex GINS protein SLD5 | 10 | 220 | - | - | |
| Mch5g0403 | 230 | PANTHER | SLD5 PROTEIN | 12 | 230 | IPR008591 | GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro) | |
| Mch5g0403 | 230 | PIRSF | GINS_Sld5 | 2 | 230 | IPR008591 | GO:0006261(InterPro) | |
| Mch5g0403 | 230 | Pfam | GINS complex protein helical bundle domain | 77 | 139 | IPR021151 | - | |
| Mch5g0403 | 230 | CDD | GINS_B_Sld5 | 169 | 230 | IPR031633 | - | |
| Mch5g0403 | 230 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Mch5g0403 | 230 | SUPERFAMILY | PriA/YqbF domain | 171 | 230 | - | - | |
| Mch5g0403 | 230 | Pfam | DNA replication complex GINS protein SLD5 C-terminus | 169 | 230 | IPR031633 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch5g0403 | K10735 | - | csv:101210888 | 406.371 |