Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0510 ATGTTCAACTGGCTTCACTCCAACTTCCACTACAATCCTCTTAAAGCTGAGTCTAAACGAAATGTGTGGAGAAAGAACACAAAATCTGTGGCAAAGCATGTTGATGAGATCTTCGATGTTCTTGAGGATTGGAGAATCAATGGTCGGCGTCTTACAATTTGCGTTGTGGGGTTTGAGAGATCATCAAAACCCAGAAATTATCCAACGGAATATTGCAATTTGAAGAAGGAGGGGAAGAGATCAGATGAAGTTGTAGATGATGATCTTAATGATGATGATGATGATGAGCTGAGCCCATTAATGGCGACGACATTTCAGAACAACTTCGACGACAGTGGTGAGTTCTGTATTGCGGAGCTTTTCATGGCGGATGCTGATGTGAAGCCGAAACCGGCGCCGGAGGAGAACGTGGCGGCGCGGAAGAAACCGGAAGTTAAGACGGCGAACGGCAGCTGCTCGGCCAAGAAGCCGAAGGAGGCGGCGAAGCCAGCTGGGAGAAGTCTCCGGCGATTTATTGTGGCAGGAATGGGTTCAGATCCCAAGGTTTTCGCCTTCGATGAAGTGGCTAAACACAATCACCAGCGGGATTGCTGGCTTATAATCTCTGGAAAGGTATATGATGTCACCCCTTTTCTGGAAGAACATCCTGGAGGTGATGAAGTCTTGATATTAGCTTCTGAAAAAGATGCAACTGATGATTTTGAAAATGTGGGTCACAGTCTATCTGCCATAGACCAAATGGAACAATATTATGTTGGCAACGTTGACATGTCTACTGTTCCAAAGCCAATCGATTACCGACCACCTGCATCGCAATCAGCAACGACTCTTGCATCGGCTCAATCTTCAGGATCTTCACTAAAACTACTGCAATTTCTGATTCCCCTGCTGCTTATAGGTGTTGCATTTTATATGCAATTCTATGGCAAAAAACAGTAA 939 45.26 MFNWLHSNFHYNPLKAESKRNVWRKNTKSVAKHVDEIFDVLEDWRINGRRLTICVVGFERSSKPRNYPTEYCNLKKEGKRSDEVVDDDLNDDDDDELSPLMATTFQNNFDDSGEFCIAELFMADADVKPKPAPEENVAARKKPEVKTANGSCSAKKPKEAAKPAGRSLRRFIVAGMGSDPKVFAFDEVAKHNHQRDCWLIISGKVYDVTPFLEEHPGGDEVLILASEKDATDDFENVGHSLSAIDQMEQYYVGNVDMSTVPKPIDYRPPASQSATTLASAQSSGSSLKLLQFLIPLLLIGVAFYMQFYGKKQ 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3382257 3389269 + MC05g0461 Mch5g0510 687929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0510 312 Gene3D - 177 259 IPR036400 -
Mch5g0510 312 FunFam Cytochrome b5 type B 177 260 - -
Mch5g0510 312 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 179 269 IPR036400 -
Mch5g0510 312 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 211 218 IPR018506 GO:0020037(InterPro)
Mch5g0510 312 MobiDBLite consensus disorder prediction 130 162 - -
Mch5g0510 312 SMART Cyt_b5_2 183 256 IPR001199 -
Mch5g0510 312 PANTHER CYTOCHROME B5 178 308 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Mch5g0510 312 PRINTS Cytochrome B5 signature 205 215 IPR001199 -
Mch5g0510 312 PRINTS Cytochrome B5 signature 230 237 IPR001199 -
Mch5g0510 312 PRINTS Cytochrome B5 signature 215 229 IPR001199 -
Mch5g0510 312 PRINTS Cytochrome B5 signature 243 255 IPR001199 -
Mch5g0510 312 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 180 256 IPR001199 -
Mch5g0510 312 Pfam Cytochrome b5-like Heme/Steroid binding domain 186 255 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0510 Mch-Chr5:3382257 Mch7g0872 Mch-Chr7:13249802 1.86E-41 dispersed
Mch5g0510 Mch-Chr5:3382257 Mch6g1825 Mch-Chr6:20818771 7.86E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0510 K23490 - csv:101205000 202.216