Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0651 ATGGGTTGCGTTCTTGGCAAGTGTTGCACTTCCAGTGGCTACCCGCCGTCTTCAGCCGGCGACATGGCGGAATTCTACGACAGCCCGCCGTGCAGTTTACATGGAAAACATATACTAACGGGAAGGTCATTGGAGTTTGTTCATGTGCCTTCTCACAACTACCATATGGAGTACTCGCTCCTCACCCAGCGTGGCTACTATCCTGATTCCCCTGATAAAGAAAACCAAGACAGCCTCTGTGTCAGTACACAGATCCGAGGTAATCCAAACATCCATTTCTTCGGTGTTTTCGACGGACACGGTCAATTCGGATCACAGTGTTCGAATTTTGTTAAGAGTAGGGTGGTGGAAATACTATGTAATGATCCAACATTGTTGGAAGATCCTGTAAAAGCTTATAATTCAGCATTTTTAACCACGAATGATGATTTGCATAATAGTGAGATTGATGATTCCATGAGTGGCACAACAGCTATTACTGTGCTTGTTGTTGGGAATACCCTTTACGTTGCGAATGTGGGTGATTCAAGGGCAGTCATTGCCGTTAAAGATGGGAATCGAATTGTTGCCGAGGATCTATCTCGTGATCAAACACCATTTAGGAAGGATGAGTGCGAGAGAGTAAAGCTTGCTGGGGCTAGGGTGTTGACTATTGATCAAATTGAAGGGCTTAAGGATCCAGATATTCAGATATGGGGCGATGAGGAGAGCGAGGGTAGCGATCCCCCTCGGTTGTGGGTTCCTAATAACTTGTATCCTGGTACTGCATTTACTAGGAGTGTTGGAGACCATACAGCCGAGAAGATTGGTGTCATTGCTGTCCCTGAAGTTTCAACGGTTCAGCTGACTCCAAACCATCTGTTCTTTGTCGTTGCAAGTGACGGAGTTTTCGAGTTCCTTACAAGTCAAGCTGTTGTTGATATGGCTGCAAGGTATAGTGATCCACGGGATGCATGCGCTGCTATTGCTGGAGAATCGTACAAGCTATGGTTGGAGCACGAAAACCGGACAGATGATATAACAATCATCATAGTGCACATTAAAGGCCTCTCTAATGTATGTGCTGTTGTTACCGCTGGGCTGAATGGGGTCTGCATAAGGCACACGAGTTCAGAGCGGGAAACTTCTGAGATCTCCGCGTTCACTGGAAGTTCGGAGGTCTTTCGCTCCATCAGAAGTGATTTCTCAGATCTACAGATCTCTCAGCATGTGGGTTTGATGAACAGGAGTACAGCGATTGTCGTTCCATCTCCCGCACGGCACCGACCGTTGGAAGTGGTGTTTGTTTTAGTCTCTTCCTTGCCACATTATTTACTATTGCATTAT 1326 46.3 MGCVLGKCCTSSGYPPSSAGDMAEFYDSPPCSLHGKHILTGRSLEFVHVPSHNYHMEYSLLTQRGYYPDSPDKENQDSLCVSTQIRGNPNIHFFGVFDGHGQFGSQCSNFVKSRVVEILCNDPTLLEDPVKAYNSAFLTTNDDLHNSEIDDSMSGTTAITVLVVGNTLYVANVGDSRAVIAVKDGNRIVAEDLSRDQTPFRKDECERVKLAGARVLTIDQIEGLKDPDIQIWGDEESEGSDPPRLWVPNNLYPGTAFTRSVGDHTAEKIGVIAVPEVSTVQLTPNHLFFVVASDGVFEFLTSQAVVDMAARYSDPRDACAAIAGESYKLWLEHENRTDDITIIIVHIKGLSNVCAVVTAGLNGVCIRHTSSERETSEISAFTGSSEVFRSIRSDFSDLQISQHVGLMNRSTAIVVPSPARHRPLEVVFVLVSSLPHYLLLHY 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4335453 4338442 + MC05g0572 Mch5g0651 688070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0651 442 SMART PP2C_4 31 345 IPR001932 -
Mch5g0651 442 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 52 349 - -
Mch5g0651 442 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169(InterPro)
Mch5g0651 442 SUPERFAMILY PP2C-like 44 349 IPR036457 -
Mch5g0651 442 ProSiteProfiles PPM-type phosphatase domain profile. 57 347 IPR001932 -
Mch5g0651 442 PANTHER PROTEIN PHOSPHATASE 58 346 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch5g0651 442 Pfam Protein phosphatase 2C 77 321 IPR001932 -
Mch5g0651 442 CDD PP2Cc 73 347 IPR001932 -
Mch5g0651 442 Gene3D - 45 349 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0651 Mch-Chr5:4335453 Mch8g2798 Mch-Chr8:30983631 3.96E-26 dispersed
Mch6g0835 Mch-Chr6:5783066 Mch5g0651 Mch-Chr5:4335453 1.76E-137 transposed
Mch6g2791 Mch-Chr6:29345587 Mch5g0651 Mch-Chr5:4335453 1.19E-09 transposed
Mch5g0651 Mch-Chr5:4335453 Mch7g1117 Mch-Chr7:15125580 1.73E-197 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0651 - - - 0.0