Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g0670 | ATGGGGTGTGTTTTTGGGCGAGAGGTATCTGCGAAGCCCGTCGAGGGAGAGGCGAAGAGGGCGGACGCCGCGGCGGAGGCTGCGGCGGAGGAAATTAGGGCTTCTGCGAAAGCGGAGGCTGGTGAGGCGGCTAATGCTTGCAATGGCGGGGCTAGGAAGGCGGTTGAGGATGAGAATCACAGAGGTTCGAGGCCGAGAGGCGAGCGGCGGCGATCGTCAAGGCCGAATCCGAGATTGAGTAATCCGCCGAAGCATGTGCACGGGGAGCAAGTCGCCGCCGGCTGGCCCTCTTGGCTCTCCGCCGTCGCCGGTGAGGCTATCAATGGATGGATTCCTCGTCGCGCGGACACTTTCGAGAAGCTTGATAAAATTGGGCAGGGGACGTATAGTAATGTGTACAAAGCAAGGGATACATTGACAGGGAAGATTGTGGCTCTAAAGAAGGTTCGTTTTGACAATTTGGAGCCGGAGAGTGTGAGATTTATGGCGCGAGAAATTCTCATTCTGCGGCGTTTGGATCATCCTAATGTTGTAAAGCTAGAAGGTTTGGTGACGTCCCGGATGTCGTGCAGTTTATATCTTGTATTTGAATATATGGAGCATGATTTAGCTGGACTTGCTGCTAGCCCCGGGATCAAGTTTACCGAACCGCAGGTTAAATGTTACATGAACCAATTATTATCAGGGCTTGAACATTGTCACAACCGTCACGTGTTGCATCGTGATATTAAGGGATCAAATCTTCTAATTCGTAATGATGGGATCCTTAAGATAGCCGATTTCGGTTTGGCGTCTGTCTTTGATCCTAACCACAAGCAACCAATGACAAGTAGGGTGGTTACTCTATGGTATAGACCTCCCGAACTTCTTCTTGGAGCTACTGATTATGGTGTTGGTGTGGACCTTTGGAGTGCTGGCTGCATTTTAGCTGAGTTGTTAGCTGGAAGGCCGATCATGCCCGGTCGCACGGAGGTCGAGCAGCTGCATAAGATATTCAAGTTATGTGGCTCTCCTACAGACGAATACTGGAAAAAATCGAAGTTGCCTCATGCAACCATATTCAAGCCTCAGCATTCATACAAGAGATGCATATCAGAGACATTTAAAGACTTTCCGCCATCGTCTCTGCCATTAATCGAGATACTTCTTGCAATCGACCCGGCTGAACGCCTTTCGGCCACTGCTGCTTTACATAGTGAATTTTTCACTACCAAGCCATATGCTTGTGAGCCTTCCAGCCTTCCCAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTGCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGCTGGCCGAAGCAACGCCGATGGGGTGAAGAAATCACGTGCACGCGATCGAGCTGTGCGGGCAATTCCAGCTCCAGAAGCCAATGCTGAGCTTCAAGCCAATCTCGATAGGCGGCGTCTCATAACTCATGCGAATGCGAAGAGCAAGAGCGAAAAGTTTCCTCCTCCACATCAAGACGGAGCGCTTGGCTACCCTCTGGGATCTTCACACCACGTCGATCCCATCTACGATCCTCCCGACGTTCCATTTAGCACCATGAATTTCTCATATCCAAAAGCAAACATTCAGACATGGTCTGGTCCCTTGATGGACCCAGCTGCTGTTGGTGCTCCAAGAAGGAAAAAACACACTCTAGGTGATGGCCATTCATCAAAATCATCCAAGGACTTGCGGAAGGATAAAAATTCTGCTCGGATATAA | 1731 | 50.09 | MGCVFGREVSAKPVEGEAKRADAAAEAAAEEIRASAKAEAGEAANACNGGARKAVEDENHRGSRPRGERRRSSRPNPRLSNPPKHVHGEQVAAGWPSWLSAVAGEAINGWIPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPGIKFTEPQVKCYMNQLLSGLEHCHNRHVLHRDIKGSNLLIRNDGILKIADFGLASVFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPTDEYWKKSKLPHATIFKPQHSYKRCISETFKDFPPSSLPLIEILLAIDPAERLSATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNADGVKKSRARDRAVRAIPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHVDPIYDPPDVPFSTMNFSYPKANIQTWSGPLMDPAAVGAPRRKKHTLGDGHSSKSSKDLRKDKNSARI | 576 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4518006 | 4522275 | - | MC05g0589 | Mch5g0670 | 688089 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g0670 | 576 | ProSiteProfiles | Protein kinase domain profile. | 118 | 402 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch5g0670 | 576 | ProSitePatterns | Protein kinases ATP-binding region signature. | 124 | 147 | IPR017441 | GO:0005524(InterPro) | |
Mch5g0670 | 576 | MobiDBLite | consensus disorder prediction | 546 | 576 | - | - | |
Mch5g0670 | 576 | MobiDBLite | consensus disorder prediction | 53 | 75 | - | - | |
Mch5g0670 | 576 | Gene3D | Phosphorylase Kinase; domain 1 | 105 | 200 | - | - | |
Mch5g0670 | 576 | MobiDBLite | consensus disorder prediction | 482 | 503 | - | - | |
Mch5g0670 | 576 | FunFam | probable serine/threonine-protein kinase At1g54610 | 201 | 442 | - | - | |
Mch5g0670 | 576 | CDD | STKc_CDK9_like | 118 | 402 | - | - | |
Mch5g0670 | 576 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 238 | 250 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch5g0670 | 576 | Pfam | Protein kinase domain | 118 | 402 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch5g0670 | 576 | MobiDBLite | consensus disorder prediction | 538 | 576 | - | - | |
Mch5g0670 | 576 | SUPERFAMILY | Protein kinase-like (PK-like) | 112 | 407 | IPR011009 | - | |
Mch5g0670 | 576 | Gene3D | Transferase(Phosphotransferase) domain 1 | 201 | 441 | - | - | |
Mch5g0670 | 576 | MobiDBLite | consensus disorder prediction | 1 | 90 | - | - | |
Mch5g0670 | 576 | PANTHER | CELL DIVISION PROTEIN KINASE | 117 | 402 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Mch5g0670 | 576 | FunFam | probable serine/threonine-protein kinase At1g54610 | 105 | 200 | - | - | |
Mch5g0670 | 576 | MobiDBLite | consensus disorder prediction | 12 | 37 | - | - | |
Mch5g0670 | 576 | SMART | serkin_6 | 118 | 402 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1889 | Mch-Chr11:18731472 | Mch5g0670 | Mch-Chr5:4518006 | 6.42E-195 | dispersed | |
Mch2g0040 | Mch-Chr2:321771 | Mch5g0670 | Mch-Chr5:4518006 | 1.57E-112 | dispersed | |
Mch2g0640 | Mch-Chr2:4391070 | Mch5g0670 | Mch-Chr5:4518006 | 4.61E-188 | dispersed | |
Mch2g0641 | Mch-Chr2:4396942 | Mch5g0670 | Mch-Chr5:4518006 | 3.14E-189 | dispersed | |
Mch3g1720 | Mch-Chr3:18719533 | Mch5g0670 | Mch-Chr5:4518006 | 6.39E-191 | dispersed | |
Mch4g2347 | Mch-Chr4:24752181 | Mch5g0670 | Mch-Chr5:4518006 | 9.41E-178 | dispersed | |
Mch5g0670 | Mch-Chr5:4518006 | Mch6g1637 | Mch-Chr6:18103025 | 1.98E-286 | dispersed | |
Mch1g1062 | Mch-Chr1:13578296 | Mch5g0670 | Mch-Chr5:4518006 | 9.87E-141 | transposed | |
Mch3g1322 | Mch-Chr3:16018860 | Mch5g0670 | Mch-Chr5:4518006 | 2.47E-240 | transposed | |
Mch5g0670 | Mch-Chr5:4518006 | Mch8g2856 | Mch-Chr8:31430138 | 1.83E-23 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77406 | PF00069 | Pkinase | 6.90E-68 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch5g0670 | K08819 | - | csv:101217952 | 999.193 |