Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0682 ATGGGTGGGTGTTTCCCTTGTTGTGGATCCTCCGATGAAGACGGTAATGGAGTGAAGGAATCTGCGAAGAAGAAGGATTCAGCTAAGGATGGCTCCACCGCCCAGGCTCACCATGTTAGCAGAGTAAGCTCAGATAAATCGAAGTCGCGAAGTGTATCCGATACTAAGAAGGAACCAACAGTTCAAAAAGATGGAACAACAGCACATATTGCAGCCCAAACATTTACATTTCGGGAGCTCGCTACAGCTACAAAGAACTTTAGACCAGAATGCTTACTGGGAGAAGGGGGGTTTGGAAGGGTTTACAAAGGTCGCTTGGAGAGCACAGGACAGGTAGTGGCTGTGAAGCAGCTTGACCGTAATGGTCTTCAAGGAAATCGGGAATTTTTGGTGGAGGTCCTGATGCTTAGCCTGTTACATCACCCGAATCTTGTTAACTTGATAGGCTATTGTGCTGATGGGGATCAACGTCTTCTTGTTTATGAATTCATGCCCTTGGGATCGTTGGAAGATCATTTACATGATCTTCCACCAGATAAGGAGCCTTTGGATTGGAATACTCGAATGAAGATTGCAGCTGGTGCCGCGAAGGGATTGGAATACTTGCATGACAAAGCAAACCCCCCTGTCATATATCGAGACTTGAAGTCGTCTAATATTCTTCTTGATGAGGGCTACCACCCCAAGCTGTCAGATTTCGGTCTTGCGAAACTGGGGCCAGTCGGTGATAAGACTCACGTCTCGACGAGAGTGATGGGAACATATGGTTATTGTGCTCCGGAGTATGCTATGACTGGTCAGCTCACTCTCAAGTCAGATGTATATGGTTTTGGAGTTGTCTTTCTAGAACTTATCACAGGGCGTAAGGCGATCGATAATACCAGAGGTCCGGGTGAGCATAATCTTGTAGCATGGGCTCGGCCACTTTTTAAAGATCGCCGGAAGTTCCCTAAGATGGCCGATCCACTGCTGCAAGGCCGGTATCCTATGCGGGGACTTTATCAGGCATTGGCAGTAGCGGCAATGTGCTTGCAGGAACAGGCTGCTACAAGACCCCTAATCGGGGACGTTGTCACTGCACTGACGTATTTAGCTTCCCAAACATATGATCCTAATGCAGCTGCTTCTCAAAGCAATCGAATGAGTGGATCTACTCCACGAGCCCGAGACGAGCGGAGAGGTTTTCCAGATGGGTTGGATAGCCCCGATGAGCGTGGCCGCGGACGTGGCTCCCCATCAAACTACAAAAACTCACCTGATTACAGAAAGAAAGAGCTCCATAGGGAATTGAGTCGTGGTGGTACAGAGCTCGGCAAACTCGACACTGGAGGCGGGTCTGGTCGAAAGTGGGGCTTGGATGAGTTGGAACGACAAGAATCTCTGCGAGACAGTCCTGTATATACCGGGAGAGCAAGGGAAACACCGAGGAACCGTGATCTAAACAGAGAACGTGCAGTGGCAGAAGCAAAAGTGTGGGGTGAAAACTGGAGAGAGAGAAAGCGGGCGAATGCGCAGGGCAGCTTCGACGGTTCACAGGAATGA 1542 49.35 MGGCFPCCGSSDEDGNGVKESAKKKDSAKDGSTAQAHHVSRVSSDKSKSRSVSDTKKEPTVQKDGTTAHIAAQTFTFRELATATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYGFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAAASQSNRMSGSTPRARDERRGFPDGLDSPDERGRGRGSPSNYKNSPDYRKKELHRELSRGGTELGKLDTGGGSGRKWGLDELERQESLRDSPVYTGRARETPRNRDLNRERAVAEAKVWGENWRERKRANAQGSFDGSQE 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4584271 4589301 - MC05g0600 Mch5g0682 688101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0682 513 Gene3D Transferase(Phosphotransferase) domain 1 164 384 - -
Mch5g0682 513 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524(InterPro)
Mch5g0682 513 FunFam Serine/threonine-protein kinase PBS1 164 379 - -
Mch5g0682 513 MobiDBLite consensus disorder prediction 16 32 - -
Mch5g0682 513 SUPERFAMILY Protein kinase-like (PK-like) 73 372 IPR011009 -
Mch5g0682 513 FunFam Serine/threonine-protein kinase PBS1 60 163 - -
Mch5g0682 513 SMART serkin_6 87 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g0682 513 MobiDBLite consensus disorder prediction 373 482 - -
Mch5g0682 513 Pfam Protein kinase domain 92 299 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g0682 513 CDD STKc_IRAK 93 362 - -
Mch5g0682 513 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g0682 513 Gene3D Phosphorylase Kinase; domain 1 57 163 - -
Mch5g0682 513 MobiDBLite consensus disorder prediction 385 410 - -
Mch5g0682 513 MobiDBLite consensus disorder prediction 1 65 - -
Mch5g0682 513 MobiDBLite consensus disorder prediction 418 435 - -
Mch5g0682 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch5g0682 513 PANTHER OS07G0668900 PROTEIN 35 381 - -
Mch5g0682 513 MobiDBLite consensus disorder prediction 41 63 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1250 Mch-Chr10:10104838 Mch5g0682 Mch-Chr5:4584271 8.84E-173 dispersed
Mch5g0682 Mch-Chr5:4584271 Mch7g0042 Mch-Chr7:375400 3.32E-222 dispersed
Mch5g0682 Mch-Chr5:4584271 Mch9g1622 Mch-Chr9:18385833 7.21E-200 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77407 PF00069 Pkinase 5.20E-45 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0682 - - - 0.0