Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0702 ATGCTGCAAGCAAAACCCGAGGGAGAGCTTGAAGTTAGCTTTGGTTATCAATGCAATGGTATCATAAACGGCATTCATGAGGTTTCTGACAAGATCGAGATCCAGCCGCCCGGACTTCGAAGGGTCAGCAGTTTCTCTTGCTTATCTGGGGCTGCCTTGAGTGCAAATGCCACCCTAGCAAACACAAATATATGCAATGGGTTGATAGGAATAGAAATACTGCCGACCTGGGACTCTCCTAACTCCTTCCGCAGGGTTCCCTCATCACCTACTCTTTCAAGGTTGGATATATTGTCATCGTCTCTGCAGAGTAGCCTGTCAAACTTAAGTTGCAGTCCAACGACCCCAACATCCGAATATGATTCATATTTGTTGAAATCCATGAGTGCTCCTTCTGGAAGCGAAGGTTTTCTTAATGTTAAGGAACTGCAAGTGGCAGGTGGAGCTGCTGGTGAAGACAGGGTCCAAGCTGTTTGTTCTGAAGAAAATGGATGGCTATTTTGTGCAATTTATGATGGTTTTAATGGAAGAGATGCCGCTGATTTTCTTGCTGGCACATTGTATGAAACCATCGTATTTTATTTTAACCTACTAGACTGGGGGAATGAAACCGCCTACGACGGTTTGGACACAGATAATTCACATCTTCTTGATGATAGTAGTATCACTCATGGAAGATTTTCTCCTTTAAAGAACAATAGTAAAATTGCTTCTGATATCAATAATATCTTCGAGAACCTTTCACATGCCGAAGCAGGAATGTCAACTAATCATCTAAGGCATGGGGTGCTCGATAGCCTCCAGCGTGCTCTTAGTCAAGCAGAGAATGATTTTCTGCACATGGTTGAACAGGAAATGGAGGATCGTCCTGATTTAGTTTCTGTCGGATCTTGTGTTTTAGTGGTGCTTCTTCATGGAATGGATTTGTATACGCTAAATTTAGGTGACAGTAGAGCAGTACTAGCTACCCTTGATGAAGGTGCTATGAAAGGGAATGGAGGACTGAAAGCTGTCCAACTAACCGAGAGTCACACTGTGGATAATGAACTTGAGAGAGCACAGTTACAACATGTTCATCCTGATGATCCTGCAACCATCGTTGGTGGCAAAGTCAAAGGAAAACTGAAGGTGACTCGTGCTTTTGGAGTTGGCTACTTGAAGACGAAAAAGTTTAATGATGCTTTGATGGGTATTCTTCAAGTTCGTAACCTAATTAGCCCTCCCTATATTTCCACTCAACCGGCATTGTCTGTCCATAGGATATCAAAATCAGATTGCTTTGTTATAGTTGGCAGTGATGGTTTATTTGACTTTTTTGGCAATGACGAGGCAGTGAACCTTGTCCATTCATATATCCTGAGCAACCCAACTGGTGATCCTGCAAAATTTTTGCTGGAGCAGCTCTTATTGAAAGCAGCTGATTGCGCAGGTTTTAGCAAGGAAGAATTAATTACCATTCCTGCCGGCAGGAGAAGAAAATATCATGATGATGTAACTGTTATTGTAATCATCCTTGGAACAAACCAGCGCACCACAAGAGCATCTACCAGCATGACCTGTCTCAAATGGAATAAAAAATCCCCAACTTATGAGGGGCATGAGCAGAGATGA 1611 42.77 MLQAKPEGELEVSFGYQCNGIINGIHEVSDKIEIQPPGLRRVSSFSCLSGAALSANATLANTNICNGLIGIEILPTWDSPNSFRRVPSSPTLSRLDILSSSLQSSLSNLSCSPTTPTSEYDSYLLKSMSAPSGSEGFLNVKELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIVFYFNLLDWGNETAYDGLDTDNSHLLDDSSITHGRFSPLKNNSKIASDINNIFENLSHAEAGMSTNHLRHGVLDSLQRALSQAENDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGMDLYTLNLGDSRAVLATLDEGAMKGNGGLKAVQLTESHTVDNELERAQLQHVHPDDPATIVGGKVKGKLKVTRAFGVGYLKTKKFNDALMGILQVRNLISPPYISTQPALSVHRISKSDCFVIVGSDGLFDFFGNDEAVNLVHSYILSNPTGDPAKFLLEQLLLKAADCAGFSKEELITIPAGRRRKYHDDVTVIVIILGTNQRTTRASTSMTCLKWNKKSPTYEGHEQR 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4757016 4769036 - MC05g0619 Mch5g0702 688121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0702 536 CDD PP2Cc 150 505 IPR001932 -
Mch5g0702 536 Pfam Protein phosphatase 2C 268 456 IPR001932 -
Mch5g0702 536 PANTHER PROTEIN PHOSPHATASE 2C 146 503 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Mch5g0702 536 Gene3D - 117 514 IPR036457 -
Mch5g0702 536 SMART PP2C_4 131 503 IPR001932 -
Mch5g0702 536 Coils Coil 264 284 - -
Mch5g0702 536 SUPERFAMILY PP2C-like 151 506 IPR036457 -
Mch5g0702 536 ProSiteProfiles PPM-type phosphatase domain profile. 137 505 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0902 Mch-Chr2:6129808 Mch5g0702 Mch-Chr5:4757016 1.33E-63 dispersed
Mch5g0702 Mch-Chr5:4757016 Mch8g3003 Mch-Chr8:32638254 2.45E-07 dispersed
Mch5g0702 Mch-Chr5:4757016 Mch1g0718 Mch-Chr1:11098233 2.67E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0702 - - - 0.0