Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g0747 | ATGTCTACGGCCAGTTCGAGCTCTGTCAGGAAAGCCGCCGAAGCTGTCCCCGACCAGTTTCCGGCCGGCCTCCGTGTCCTGGTTGTCGATGATGATCCGACCTGCCTTATGATCTTGGAGAAGATGCTTCGTATTTGCCGCTACGAAGTAACAAAATGTAGTCGAGCAGAGGATGCGCTGTCTCTTCTCAGACGGTATAAAAATGGGTTCGATATTGTTCTGAGCGACGTCCACATGCCCGACATGGATGGATTCAAGCTTCTGGAATACATTGGATTGGAAATGGACTTGCCTGTTATCATGATGTCGGTTGACGATGGGAAAAACGTCGTCATGAAGGGAGTGACTCACGGTGCTTGTGACTATCTAATTAAACCAGTTCGAATTGAAGCATTGAAGAACATATGGCAGCATGTTGTTCGCAAGCGAAAGAATGAATGGAAGGATTTGGAGCAATCTGGATGTGTGGATGATGTAGATCGGCAGCAAAAAACGAATGAAGATGCAGATTATTCGTCATCAGCTAATGAAGGGAGTTGGAGGAACTCAAAGAGGAGGAAGGATGATGTAGAAGATGCCGAAGAGAGAGACGATTCATCGACCCTAAAGAAACCAAGGGTCGTTTGGTCCGTTGAGCTGCATCAACAGTTTGTGGCTGCTGTTAATCAACTAGGAATTGATAAGGCTGTTCCCAAGAAGATTCTGGAGTTGATGAATGTTCCTGGACTCACTAGAGAAAACGTCGCCAGTCACCTTCAGAAATATCGCTTGTATCTGAGAAGGCTTAGTGGAATCACACAACACCAGAGTAATTTGAACAACACATTCATGAGTGCCCAAGAAGCAACATTTGGGCCAATGTCGTCCCTGAATGGACTCGATCTCCAAACTCTCGCTGCTGCCAGTCAACTCCAGCCACAAAGCCTTGCTACACTCCAAGCAGCTGGATTTGGTAGGCCTACCGCAAAATCGGGCTTGCCCATGCCTCTTGTTGATCAAAGGAATCACATCTTTAGCTTTGAAAATCCGAAGTTGAGATTCGGTGACGGGCAACAGCAACATCTGAACAGTAGTAAACCGGTGAACCTACTTCATGGAATTCCAACAACAATGGAGCCAAAACAGCTCGCTAATCTACAGCATTCTGCACAATCTCATGGGAACATGACAATGCAAGCTAATGCTCAAGTAGGCCAAAGTAGCTCTCAACTCATGCAGACACCTCAACCACAAGCTCGAGCACAGATCCTTAACGAAAGTACCTCAACTAGTGTAACGAGGCTTCCACCAACAATACAGCAGTCGATTTTGCCAAACGGAACCACCGGTGGGGTTTTGGCAAGGAATGAATTCACCAATAACAGTAGAGGTGGAGGGTACAATCTAGTTACACCAGCCTCAACAATGATAAATTTTCCCATGAACCAAACTGCAGAGTTGCCGGGTAACAGTTTTCCTCTTCAAAGTACCCCAGGGATGTCAAGTATAGTACAGAAGGGAAGATTCTCGGATGGGGTTAACTCAGACATTAAAGGATCCGAAGGTTTCGTGCCAAGCTACGAAATGTTTAGGGATCTGCATCCTCAGAAGCCCCATGATTGGGACTTGCAACACGTAGGTGTGACCTTCGATGCATCTCAAGGTAGTCTCGCACTCGACATTCCTCCGTCAGCTTTTGCTCATCAAGGGTATGCCTCTAGCCAACAAAACGGACAAAACAGGAATGCAGCTACTGCTGGCAAGGCCATGTTCTTGTTGGAAGAAGAAACTGGCAATGGGAATTCACAAAATATGGGTCAACAACTCAACTCTATTTTCGTCGATGGTTCCGTTAGAGTTAAAGTTGAAAGGGTAGCTCCTGATACCGGCAGTCAAACTGACCTTTTTCCCGAACACTTTGGTCAGGAGGATCTAATGAGTGCACTTCTTAAGCAGCAACAGGGAAGCATTGGAACAGCTGAAAGTGAGTTGGAATGGGTATTTCATGCATAG | 1992 | 46.39 | MSTASSSSVRKAAEAVPDQFPAGLRVLVVDDDPTCLMILEKMLRICRYEVTKCSRAEDALSLLRRYKNGFDIVLSDVHMPDMDGFKLLEYIGLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGCVDDVDRQQKTNEDADYSSSANEGSWRNSKRRKDDVEDAEERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGITQHQSNLNNTFMSAQEATFGPMSSLNGLDLQTLAAASQLQPQSLATLQAAGFGRPTAKSGLPMPLVDQRNHIFSFENPKLRFGDGQQQHLNSSKPVNLLHGIPTTMEPKQLANLQHSAQSHGNMTMQANAQVGQSSSQLMQTPQPQARAQILNESTSTSVTRLPPTIQQSILPNGTTGGVLARNEFTNNSRGGGYNLVTPASTMINFPMNQTAELPGNSFPLQSTPGMSSIVQKGRFSDGVNSDIKGSEGFVPSYEMFRDLHPQKPHDWDLQHVGVTFDASQGSLALDIPPSAFAHQGYASSQQNGQNRNAATAGKAMFLLEEETGNGNSQNMGQQLNSIFVDGSVRVKVERVAPDTGSQTDLFPEHFGQEDLMSALLKQQQGSIGTAESELEWVFHA | 663 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 5033128 | 5037699 | + | MC05g0657 | Mch5g0747 | 688166 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g0747 | 663 | SMART | REC_2 | 24 | 136 | IPR001789 | GO:0000160(InterPro) | |
Mch5g0747 | 663 | FunFam | Two-component response regulator | 24 | 161 | - | - | |
Mch5g0747 | 663 | Gene3D | - | 24 | 156 | - | - | |
Mch5g0747 | 663 | Gene3D | - | 201 | 263 | - | - | |
Mch5g0747 | 663 | CDD | REC_typeB_ARR-like | 26 | 140 | - | - | |
Mch5g0747 | 663 | MobiDBLite | consensus disorder prediction | 180 | 201 | - | - | |
Mch5g0747 | 663 | ProSiteProfiles | Response regulatory domain profile. | 25 | 140 | IPR001789 | GO:0000160(InterPro) | |
Mch5g0747 | 663 | PIRSF | RR_ARR_type-B | 4 | 657 | IPR017053 | GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro) | |
Mch5g0747 | 663 | FunFam | Two-component response regulator | 200 | 263 | - | - | |
Mch5g0747 | 663 | SUPERFAMILY | CheY-like | 23 | 147 | IPR011006 | - | |
Mch5g0747 | 663 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 19 | 344 | IPR045279 | GO:0009736(InterPro) | |
Mch5g0747 | 663 | Pfam | Myb-like DNA-binding domain | 206 | 256 | IPR001005 | - | |
Mch5g0747 | 663 | Pfam | Response regulator receiver domain | 26 | 134 | IPR001789 | GO:0000160(InterPro) | |
Mch5g0747 | 663 | SUPERFAMILY | Homeodomain-like | 201 | 261 | IPR009057 | - | |
Mch5g0747 | 663 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 203 | 260 | IPR017930 | - | |
Mch5g0747 | 663 | MobiDBLite | consensus disorder prediction | 158 | 201 | - | - | |
Mch5g0747 | 663 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 204 | 257 | IPR006447 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0515 | Mch-Chr11:3306819 | Mch5g0747 | Mch-Chr5:5033128 | 9.10E-97 | dispersed | |
Mch5g0747 | Mch-Chr5:5033128 | Mch8g3032 | Mch-Chr8:32922850 | 3.23E-84 | dispersed | |
Mch2g0880 | Mch-Chr2:5993504 | Mch5g0747 | Mch-Chr5:5033128 | 2.18E-20 | transposed | |
Mch5g1325 | Mch-Chr5:14125354 | Mch5g0747 | Mch-Chr5:5033128 | 1.38E-23 | transposed | |
Mch8g0075 | Mch-Chr8:417170 | Mch5g0747 | Mch-Chr5:5033128 | 3.88E-90 | transposed | |
Mch5g0747 | Mch-Chr5:5033128 | Mch7g1214 | Mch-Chr7:15730654 | 1.64E-264 | wgd | |
Mch5g0747 | Mch-Chr5:5033128 | Mch9g0687 | Mch-Chr9:5174082 | 3.39E-16 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43364 | PF00072 | Response_reg | 1.80E-22 | CL0304 | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch5g0747 | K14491 | - | csv:101209013 | 1154.81 |