Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0748 ATGGCCATGGCCGCCGCCGCCGCCGATCTGGTCTTCTTCCTCATCTTCGCCTCTGTACCCTTTTCGATTTCTCAGCAAACCGGAGAAGCTCCGCCTCCGGTGGCCGATTCCTGCGATGGAATCTTCTTGTCCTACAGTTTCATCACTGGGAAGAAGCTTCCCCCAAATCTCCCTGATCCGGCTCGTCAGCCCTTCCGATTCGAGTCCACTCTCTCGATTATCAACAACGGCCTTCAGGAGCTCAAGGCTTGGAGGGTTTTTGTGGGGTTTCAGCACGATGAGTTCTTGGTCTCCGCCTCCGGCGCCGTCCTCGCCGATGGAAATACCATCCCTGGAAACGTTGGCAATGGGACGCTATTCGCTGGCTTTCCGATGACCGACCTCAAGACGGCGATTGAAACTGCCGGCGACTTGACCCAGATGCAGGTCCAGGTCAAATTACTCGGGACTCAATTCGGCGTCGCCCCGCCCAGCAGCCCCATGCCTTCCAATATATCTCTGGCCAATGATGGATATCGCTGCCCCAAGCCAGTTCTACAGGGAAAGAGTGAGATGCACGTCTGTTGCACACCCGATCCACGCGTTAAAACAAACATCACAACCAGTGAAGAGTTCTTGCCACGTCAAAATGGCGATTTAACGATCATGTATGATGTAACAAGGACCTATGATTCAAGTTATTGGGCACAAGTCACAATCTCTAACCATAATCCTCTGGGTCGTCTTGACTATTGGCAATTGAGCTGGGATTGGATGAGGGATGAGTTTATCTATTCAATGAAAGGGGCCTATCCTTCTGTTGTTGATTCTACTGATTGCATTTTCGGTAGACAAGGCACTTATTATCGGGATCTAGACTTTGCCAATGTATTGAGTTGTGAGAGAAGACCGACAATTATTGATTTGCCTCCGACCAAGGCCAACGACACCACTCTTGGAATGATCCCTTTCTGCTGTCGAAATGGTACTATCTTGCCCTCTCATATGGACCCGACCAAGTCGGTTTCTGCGTTTCAGATGCAAGTGTTTAAAATGCCACCGGATCTCAATAGATCCCAGCTTACACCTCCCCAGAATTGGCAGATCAGTGGCATTCTCAACCCCACGTATAAATGTGGCCCTCCAGTGAGGGTAAGTCCTAGCCAGTCCGCTGATTCAAGTGGTTTACCATTGAATTCGACTGCAGTTGCTAGCTGGCAGGTTGTTTGTAATATAACACAGGTCAAGGGTGACAGCCCGAAGTGCTGTGTTTCGTTTTCGGCTTTCTACAACGATTCTGTCGTCCCATGCAGAACTTGTGCTTGTGGATGCTCGCATAACTCGGCCAATACTTGTAATGCAACCGCCCCTGCAATGCTCCTTCCACCTGATGCACTTCTTGTTCCTTTTGAGAATAGGACTGTCAAGGCTGTTGCTTGGGCTGGTCTTAAACATTTCCCAATTCCTAACCCGAAGCCTTGTGCGGATAACTGCGGTGTCAGTATTAATTGGCATTTATATACCGATTATAGAGATGGGTGGAGTGCGAGGATCACTCTCTTCAACTGGGACGAAGTGAATTTTGCAGATTGGTTTGCTGCAGTTGAGATGAACAAAGCAGCACCAGGTTTCCAGGCAATGTACTCGTTCAATGCAACCACCTTGGAATTGGATGGTTTCAACAATACAATCTTCATGCAGGGTAATCCTGGACTGAACTATCTCGTGGCCGAAGCGGACGGTGTTAACCCAGCGAAGGATCCGAGGGTACCTGGAAAACAACAATCCGTGATCTCATTTACAAAGAAGAACTTACCCGGTCTTAACATGGCTGCTGGAGATGGGTTCCCCACAAAAGTGTTCTTCAATGGGGAGGAATGTCTGCTTCCAAAACTACTCCCAGCCAACGACAGTCGTAGAAACATAGCTTCATTCATTCCGAGCATCCTAATTCTACTACTCGTGTTTGTGTTTATTCAGCAATAA 1965 48.8 MAMAAAAADLVFFLIFASVPFSISQQTGEAPPPVADSCDGIFLSYSFITGKKLPPNLPDPARQPFRFESTLSIINNGLQELKAWRVFVGFQHDEFLVSASGAVLADGNTIPGNVGNGTLFAGFPMTDLKTAIETAGDLTQMQVQVKLLGTQFGVAPPSSPMPSNISLANDGYRCPKPVLQGKSEMHVCCTPDPRVKTNITTSEEFLPRQNGDLTIMYDVTRTYDSSYWAQVTISNHNPLGRLDYWQLSWDWMRDEFIYSMKGAYPSVVDSTDCIFGRQGTYYRDLDFANVLSCERRPTIIDLPPTKANDTTLGMIPFCCRNGTILPSHMDPTKSVSAFQMQVFKMPPDLNRSQLTPPQNWQISGILNPTYKCGPPVRVSPSQSADSSGLPLNSTAVASWQVVCNITQVKGDSPKCCVSFSAFYNDSVVPCRTCACGCSHNSANTCNATAPAMLLPPDALLVPFENRTVKAVAWAGLKHFPIPNPKPCADNCGVSINWHLYTDYRDGWSARITLFNWDEVNFADWFAAVEMNKAAPGFQAMYSFNATTLELDGFNNTIFMQGNPGLNYLVAEADGVNPAKDPRVPGKQQSVISFTKKNLPGLNMAAGDGFPTKVFFNGEECLLPKLLPANDSRRNIASFIPSILILLLVFVFIQQ 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5038385 5041735 - MC05g0658 Mch5g0748 688167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0748 654 PANTHER COBRA-LIKE PROTEIN 7 21 652 - -
Mch5g0748 654 Pfam COBRA-like protein 227 406 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1227 Mch-Chr10:9842657 Mch5g0748 Mch-Chr5:5038385 3.22E-266 dispersed
Mch5g0748 Mch-Chr5:5038385 Mch8g2363 Mch-Chr8:26762816 1.27E-41 dispersed
Mch5g0748 Mch-Chr5:5038385 Mch6g0305 Mch-Chr6:2022687 1.06E-42 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0748 - - - 0.0