Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g0840 | ATGGATGACGATTTTGAGCTCCCATCTGCAAGCAATGTGGACGACGAAATGGGCATTCCGGGGGACGAAGCGGAGAGCGCGGTCCTGAAGGTTGGCGAAGAGAAGGAGATTGGAAAGAACGGGCTGAAGAAGAAACTTGTCAAAGAAGGTGAAGGATGGGAGACTCCCGACACTGGGGATGAAGTCGAAGTGCATTATACGGGAACCCTTCTTGATGGGACTCAGTTCGATTCTAGCCGTGACCGAGGAACGCCTTTCAAGTTCAAGCTCGGCGAAGGGCAAGTGATTAAGGGATGGGATGAAGGTATCAAAACCATGAAAAAGGGTGAAAATGCAGTTTTTACGATACCCCCTGAATTGGCCTATGGAGAGTCCGGCTCTCCTCCAACCATTCCACCAAACGCGACACTTCAATTTGATGTTGAGCTACTTTCATGGCACAGCGTCAAAGATATCTGTCAAGATGGAGGAATCTTAAAAAAGATCCTTGTTAAAGGAGACGGCTGGGACAAACCGAAGGATATAGACGAAGTTTTGGTTATCTATGAGGCTCGTCTTGAAGATGGTACATTGATCTCAAAGTCTGATGGGGTCGAATTTAATGTCGAAAAGGGATACTTGTGTCCTGCCTTGGCAACATCTGTGAAGACAATGAAGAAGGGAGAGAAAGTACTGTTGACTGTGAGGCCACGATATGCATTTGGAGAGTCTGGCAGGCCTGCAGCTGGAGAGGAAGGTGCTGTGCCTCCTAACGCCACTCTTAAGATAACCCTTGAGTTGGTTTCTTGGAAGGCTGTCATTGACATTACTAAGGATAAGAAGGTCCTGAAGAAGACCCTGAAGGAGGGAGAAGGATATGAGCAGCCAAATGATGGAGCAGTGGTTCAAGTTAAACTCACTGGTAAACTGGCCGATGGGACAATTTTTACTAAGAAGGGTGATGATGAGAAGCCTTTTGAGTTCAAAGTCGACGAAGAACAAGTCATTGAAGGTCTCGATTTAGCTTTGAAAAAGATGAAGAAAGGTGAAGTCGCCTTGGTGACCATCCATCCACAATATGCTTTTGGGTCTTCCGACTCATCTCAAGATCTAGCCGTGGTTCCTGCAAACTCAACTGTATATTACGAAGTTGAGCTGGTTTCATTCGTCAAAGAAAAGGAGTCTTGGGACCTCAACACACCAGAGAAAATTGAAGCAGCAGGGAAAAAGAAGGAAGAAGGAAATGCTTTGTTCAAAGCTGGAAAATATGACAGAGCGTCAAGGAGATATGAAAAGGCTGTTGGCTACATTGAATATGATACTTCTTTCAGCGATGAGGAGAAGCTACAGAGCAAGGCACTAAAAGTTTCATGCAACCTCAACAATGCTGCGTGCAAATTGAAAGTTAAAGACTACAAGCAAGCAGAGAAGCTCTGTACTAAGGTGTTGGAACTCGACAGTAGGAATGTGAAAGCTCTCTACAGAAGGGCTCAAGCATACATTCAACTTGTCGATCTAGATCTTGCCGAGCAGGATATCAAGAAAGCCCTCGAGATTGATCCAGATAACAGGGAAGTGAAAATGGAATACAGACAGCTGAAGGCGAAGGTGAAAGAGTACAACAAGAAAGATGCACAGTTTTACGGCAACATTTTTGCAAAAATGAACAAGTTGGAGCAGGCCAAGTCTGCTAACTCATCTGGAAATCAGGAGGCAGTGCCAATGACTATTGATGGCAAAGCTTGA | 1725 | 45.22 | MDDDFELPSASNVDDEMGIPGDEAESAVLKVGEEKEIGKNGLKKKLVKEGEGWETPDTGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFKLGEGQVIKGWDEGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDICQDGGILKKILVKGDGWDKPKDIDEVLVIYEARLEDGTLISKSDGVEFNVEKGYLCPALATSVKTMKKGEKVLLTVRPRYAFGESGRPAAGEEGAVPPNATLKITLELVSWKAVIDITKDKKVLKKTLKEGEGYEQPNDGAVVQVKLTGKLADGTIFTKKGDDEKPFEFKVDEEQVIEGLDLALKKMKKGEVALVTIHPQYAFGSSDSSQDLAVVPANSTVYYEVELVSFVKEKESWDLNTPEKIEAAGKKKEEGNALFKAGKYDRASRRYEKAVGYIEYDTSFSDEEKLQSKALKVSCNLNNAACKLKVKDYKQAEKLCTKVLELDSRNVKALYRRAQAYIQLVDLDLAEQDIKKALEIDPDNREVKMEYRQLKAKVKEYNKKDAQFYGNIFAKMNKLEQAKSANSSGNQEAVPMTIDGKA | 574 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 5907649 | 5911265 | + | MC05g0741 | Mch5g0840 | 688259 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g0840 | 574 | SMART | tpr_5 | 400 | 433 | IPR019734 | GO:0005515(InterPro) | |
Mch5g0840 | 574 | SMART | tpr_5 | 449 | 482 | IPR019734 | GO:0005515(InterPro) | |
Mch5g0840 | 574 | SMART | tpr_5 | 483 | 516 | IPR019734 | GO:0005515(InterPro) | |
Mch5g0840 | 574 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Mch5g0840 | 574 | SUPERFAMILY | FKBP-like | 270 | 400 | - | - | |
Mch5g0840 | 574 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 175 | 264 | IPR001179 | GO:0003755(InterPro) | |
Mch5g0840 | 574 | SUPERFAMILY | FKBP-like | 23 | 158 | - | - | |
Mch5g0840 | 574 | FunFam | Peptidylprolyl isomerase | 32 | 150 | - | - | |
Mch5g0840 | 574 | SUPERFAMILY | FKBP-like | 151 | 264 | - | - | |
Mch5g0840 | 574 | FunFam | Peptidylprolyl isomerase | 388 | 543 | - | - | |
Mch5g0840 | 574 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 292 | 383 | IPR001179 | GO:0003755(InterPro) | |
Mch5g0840 | 574 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 59 | 147 | IPR001179 | GO:0003755(InterPro) | |
Mch5g0840 | 574 | MobiDBLite | consensus disorder prediction | 555 | 574 | - | - | |
Mch5g0840 | 574 | Gene3D | Tetratricopeptide repeat domain | 389 | 543 | IPR011990 | GO:0005515(InterPro) | |
Mch5g0840 | 574 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 145 | 262 | IPR050754 | - | |
Mch5g0840 | 574 | Coils | Coil | 516 | 536 | - | - | |
Mch5g0840 | 574 | Gene3D | - | 151 | 264 | IPR046357 | GO:0003755(InterPro) | |
Mch5g0840 | 574 | ProSiteProfiles | TPR repeat profile. | 483 | 516 | IPR019734 | GO:0005515(InterPro) | |
Mch5g0840 | 574 | SUPERFAMILY | TPR-like | 395 | 549 | IPR011990 | GO:0005515(InterPro) | |
Mch5g0840 | 574 | Gene3D | - | 265 | 388 | IPR046357 | GO:0003755(InterPro) | |
Mch5g0840 | 574 | FunFam | Peptidylprolyl isomerase | 265 | 385 | - | - | |
Mch5g0840 | 574 | Pfam | Tetratricopeptide repeat | 462 | 524 | - | - | |
Mch5g0840 | 574 | Gene3D | - | 31 | 150 | IPR046357 | GO:0003755(InterPro) | |
Mch5g0840 | 574 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 286 | 380 | IPR001179 | GO:0003755(InterPro) | |
Mch5g0840 | 574 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 170 | 261 | IPR001179 | GO:0003755(InterPro) | |
Mch5g0840 | 574 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 53 | 144 | IPR001179 | GO:0003755(InterPro) | |
Mch5g0840 | 574 | FunFam | Peptidylprolyl isomerase | 151 | 264 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0048 | Mch-Chr2:378072 | Mch5g0840 | Mch-Chr5:5907649 | 1.92E-13 | dispersed | |
Mch4g2562 | Mch-Chr4:26102279 | Mch5g0840 | Mch-Chr5:5907649 | 2.34E-24 | dispersed | |
Mch5g0840 | Mch-Chr5:5907649 | Mch7g0759 | Mch-Chr7:12201063 | 5.10E-16 | dispersed | |
Mch5g0840 | Mch-Chr5:5907649 | Mch10g0231 | Mch-Chr10:1422007 | 2.15E-20 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch5g0840 | K09571 | - | csv:101210041 | 1004.2 |