Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0851 ATGGACACGGAGAAAAAGCAAGGCTTTGCAGGAGGATTTCTGCACCAATCAAGTCGTTACTCGGGTTTTTCATCTAATGAAAGTAGTTTCAATGGAAAATCTGAGGTACCTTCGTCTTCAATGTCGTTCCCACCTTTGGCTCCCAGTGGTAATTCCGATTGGGGTCAATCTGGCCGTGGAATCTCCACCGATTCCAGTCGATTCAGCCATGATATTAGTAGGATGCCTGACAATCCGCGGAGAAATGCTGGTCATAGACGTGCCCATTCAGAAATCCTGACCCTTCCAGATGATATTTGTTTCGATAGCGACCTTGGTATCATTGGCGGTGCTGATGGGCCTTCTCTTTCTGATGATACTGAGGAAGATTTGCTGTCGATGTACCTTGAAATGGATAAATTCAATTCGTCGACCGCTACATCTGCAAGTCAAATGGGCGATTCATCCTCCGCTGGTGTAGAAGCAGCAGCAACTTCTACAGATGATATTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACATCAGCATAGCCAGTCCATGGACGGCTTTACAAACATAAAACCTGAGATGCTTGTCTCGGGGTCTGAAGAAGTCCCTGCAGCTGATGCCAAGAAAGCCATGTCAGCTGCAAAGCTTGCCGAGCTTGCGTTGATTGACCCCAAACGTGCAAAGAGGATATGGGCAAACAGACAGTCTGCTGCTAGATCAAAGGAAAGAAAGATGCGGTACATTGGCGAACTTGAACGGAAAGTTCAGACTCTGCAAACGGAGGCAACGTCTTTGTCCACTCAGTTGACCCTCTTACAGAGAGATGCAAGTGGTCTCAATGCCGAGAACGGTGAACTGAAGATGCGATTGCAGACAATGGAACAACAGGTTCACCTGCAAGATGCTTTAAATGAAGCACTGAAAGAGGAAATCCAGCATTTGAAAGTATTGACTGGCCAACCAATGTCAAACGGTAGACTAATTACAAACTTTACTTCCTATGTAGCTGGCCAACAATTCTATCCAAACAATCAAACAGCGCATACTTTGTTAACTGCTCAGCAGTTTCAGCAACTTCAAATCCACTCACAGCAGCAGCAGCAGCAGCATTTTCAGTATCATCAGCTGCATCAGCTTCAGCAACAACAAATTGGGGGCATAAAAAAGAAAGGGTCAGTTTCTTCTCAAAGCTCGGAAGATAATATGTCAGACTCGAAGCCTCCTACCACTTGT 1224 45.83 MDTEKKQGFAGGFLHQSSRYSGFSSNESSFNGKSEVPSSSMSFPPLAPSGNSDWGQSGRGISTDSSRFSHDISRMPDNPRRNAGHRRAHSEILTLPDDICFDSDLGIIGGADGPSLSDDTEEDLLSMYLEMDKFNSSTATSASQMGDSSSAGVEAAATSTDDIAVGLKERPRVRHQHSQSMDGFTNIKPEMLVSGSEEVPAADAKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIGELERKVQTLQTEATSLSTQLTLLQRDASGLNAENGELKMRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQPMSNGRLITNFTSYVAGQQFYPNNQTAHTLLTAQQFQQLQIHSQQQQQQHFQYHQLHQLQQQQIGGIKKKGSVSSQSSEDNMSDSKPPTTC 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6015513 6019266 - MC05g0749 Mch5g0851 688270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0851 408 Coils Coil 238 307 - -
Mch5g0851 408 MobiDBLite consensus disorder prediction 17 69 - -
Mch5g0851 408 MobiDBLite consensus disorder prediction 70 86 - -
Mch5g0851 408 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 220 283 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch5g0851 408 FunFam probable transcription factor PosF21 221 274 - -
Mch5g0851 408 MobiDBLite consensus disorder prediction 381 408 - -
Mch5g0851 408 SMART brlzneu 218 282 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch5g0851 408 CDD bZIP_plant_RF2 223 272 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch5g0851 408 Gene3D - 221 274 - -
Mch5g0851 408 MobiDBLite consensus disorder prediction 1 86 - -
Mch5g0851 408 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 69 381 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Mch5g0851 408 Pfam bZIP transcription factor 222 277 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch5g0851 408 SUPERFAMILY Leucine zipper domain 222 272 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0519 Mch-Chr2:3681985 Mch5g0851 Mch-Chr5:6015513 2.19E-11 dispersed
Mch5g0851 Mch-Chr5:6015513 Mch5g0853 Mch-Chr5:6027882 8.64E-197 dispersed
Mch5g0851 Mch-Chr5:6015513 Mch5g0852 Mch-Chr5:6022769 1.55E-139 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43373 PF00170 bZIP_1 3.90E-09 CL0018 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0851 - - - 0.0