Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g0851 | ATGGACACGGAGAAAAAGCAAGGCTTTGCAGGAGGATTTCTGCACCAATCAAGTCGTTACTCGGGTTTTTCATCTAATGAAAGTAGTTTCAATGGAAAATCTGAGGTACCTTCGTCTTCAATGTCGTTCCCACCTTTGGCTCCCAGTGGTAATTCCGATTGGGGTCAATCTGGCCGTGGAATCTCCACCGATTCCAGTCGATTCAGCCATGATATTAGTAGGATGCCTGACAATCCGCGGAGAAATGCTGGTCATAGACGTGCCCATTCAGAAATCCTGACCCTTCCAGATGATATTTGTTTCGATAGCGACCTTGGTATCATTGGCGGTGCTGATGGGCCTTCTCTTTCTGATGATACTGAGGAAGATTTGCTGTCGATGTACCTTGAAATGGATAAATTCAATTCGTCGACCGCTACATCTGCAAGTCAAATGGGCGATTCATCCTCCGCTGGTGTAGAAGCAGCAGCAACTTCTACAGATGATATTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACATCAGCATAGCCAGTCCATGGACGGCTTTACAAACATAAAACCTGAGATGCTTGTCTCGGGGTCTGAAGAAGTCCCTGCAGCTGATGCCAAGAAAGCCATGTCAGCTGCAAAGCTTGCCGAGCTTGCGTTGATTGACCCCAAACGTGCAAAGAGGATATGGGCAAACAGACAGTCTGCTGCTAGATCAAAGGAAAGAAAGATGCGGTACATTGGCGAACTTGAACGGAAAGTTCAGACTCTGCAAACGGAGGCAACGTCTTTGTCCACTCAGTTGACCCTCTTACAGAGAGATGCAAGTGGTCTCAATGCCGAGAACGGTGAACTGAAGATGCGATTGCAGACAATGGAACAACAGGTTCACCTGCAAGATGCTTTAAATGAAGCACTGAAAGAGGAAATCCAGCATTTGAAAGTATTGACTGGCCAACCAATGTCAAACGGTAGACTAATTACAAACTTTACTTCCTATGTAGCTGGCCAACAATTCTATCCAAACAATCAAACAGCGCATACTTTGTTAACTGCTCAGCAGTTTCAGCAACTTCAAATCCACTCACAGCAGCAGCAGCAGCAGCATTTTCAGTATCATCAGCTGCATCAGCTTCAGCAACAACAAATTGGGGGCATAAAAAAGAAAGGGTCAGTTTCTTCTCAAAGCTCGGAAGATAATATGTCAGACTCGAAGCCTCCTACCACTTGT | 1224 | 45.83 | MDTEKKQGFAGGFLHQSSRYSGFSSNESSFNGKSEVPSSSMSFPPLAPSGNSDWGQSGRGISTDSSRFSHDISRMPDNPRRNAGHRRAHSEILTLPDDICFDSDLGIIGGADGPSLSDDTEEDLLSMYLEMDKFNSSTATSASQMGDSSSAGVEAAATSTDDIAVGLKERPRVRHQHSQSMDGFTNIKPEMLVSGSEEVPAADAKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIGELERKVQTLQTEATSLSTQLTLLQRDASGLNAENGELKMRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQPMSNGRLITNFTSYVAGQQFYPNNQTAHTLLTAQQFQQLQIHSQQQQQQHFQYHQLHQLQQQQIGGIKKKGSVSSQSSEDNMSDSKPPTTC | 408 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 6015513 | 6019266 | - | MC05g0749 | Mch5g0851 | 688270 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g0851 | 408 | Coils | Coil | 238 | 307 | - | - | |
Mch5g0851 | 408 | MobiDBLite | consensus disorder prediction | 17 | 69 | - | - | |
Mch5g0851 | 408 | MobiDBLite | consensus disorder prediction | 70 | 86 | - | - | |
Mch5g0851 | 408 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 220 | 283 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch5g0851 | 408 | FunFam | probable transcription factor PosF21 | 221 | 274 | - | - | |
Mch5g0851 | 408 | MobiDBLite | consensus disorder prediction | 381 | 408 | - | - | |
Mch5g0851 | 408 | SMART | brlzneu | 218 | 282 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch5g0851 | 408 | CDD | bZIP_plant_RF2 | 223 | 272 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch5g0851 | 408 | Gene3D | - | 221 | 274 | - | - | |
Mch5g0851 | 408 | MobiDBLite | consensus disorder prediction | 1 | 86 | - | - | |
Mch5g0851 | 408 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 69 | 381 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Mch5g0851 | 408 | Pfam | bZIP transcription factor | 222 | 277 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch5g0851 | 408 | SUPERFAMILY | Leucine zipper domain | 222 | 272 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0519 | Mch-Chr2:3681985 | Mch5g0851 | Mch-Chr5:6015513 | 2.19E-11 | dispersed | |
Mch5g0851 | Mch-Chr5:6015513 | Mch5g0853 | Mch-Chr5:6027882 | 8.64E-197 | dispersed | |
Mch5g0851 | Mch-Chr5:6015513 | Mch5g0852 | Mch-Chr5:6022769 | 1.55E-139 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43373 | PF00170 | bZIP_1 | 3.90E-09 | CL0018 | Mch | TF |
Pathway information
