Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0867 ATGCGTCGCCTCTCTGTCAGAACCCCCAACAAACCCAAATCCTCACTCCATTTATATATATATCCCCAAATCCCTAATCAAAATCCCCAATTTCCCAATTCCCAAATTCAGTTCATGATCACAGCCTCTATTTCCAAATTCCCCGCCATTGTTCCTTCCAGATTCTCCTTCTTCCGCTCCGCCGCCGCCTCCTCCGCCATGTCTGAATCCGATCGCTCATCGCCCTTCGCCGCTCCTCGCTTGGTCCTCAAGAAGATTCTCGCCAAGCTCCAGCACGAAGGAGACGGCGCCGTCGTTCGTAGAGGCATTGGAAGAACTGATTTGAAGAATTTGGATCCGTTTCTCATGCTCGACGATTTCTCCGTCAGTCCGCCGGCTGGATTCCCTGACCATCCTCACAGAGGGTTTGAGACAGTGACCTACATGTTACAGGGAGGAATTACCCATCAAGATTTTTCTGGCCACAAGGGTACAATCAGGACTGGAGATGTCCAGTGGATGACAGCAGGGAGAGGAATTATCCATTCGGAAATGCCTGCTGGAGAAGGAAGTCAAAAGGGCTTGCAGCTTTGGATCAATCTCTCATCTCGTGACAAAACGATGGAGCCGAGGTATCAGGAGCTGCCAAGCGAGAACATTCCGAGAGCGGAGAAAGACGGGGTTGAAGTTCGCGTCATAGCAGGAGAGTCCATGGGAGTGCACTCTCCAATCTACACACGAACCCCAACCATGTACCTCGACTTCACTCTGAAACCAAGGGCTCAAGTGCACCAAAGCATCCCGGATTCGTGGACCGCATTCGTGTACATAATCGAGGGGGAAGGGGTGTTCGGGGCACCAAGCTCGTCTCGAGCGGGCGCCCACCATGTGCTAGTGCTTGGAGTTGGAGAAGGGGTGAGCGTGTGGAACAGATCTTCAAAGCCATTGAGGTTTGTTCTGATTGCAGGGAAGCCTTTGAATGAACCAATTGTGCAATATGGACCATTTGTGATGAACACACAATCTGAAATTGATCAAGCCATTGAGGATTATCACTACTCCAAAAATGGGTTTGAAATGGCAAAGCATTGGAGATCTCAGTGA 1083 50.42 MRRLSVRTPNKPKSSLHLYIYPQIPNQNPQFPNSQIQFMITASISKFPAIVPSRFSFFRSAAASSAMSESDRSSPFAAPRLVLKKILAKLQHEGDGAVVRRGIGRTDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGSQKGLQLWINLSSRDKTMEPRYQELPSENIPRAEKDGVEVRVIAGESMGVHSPIYTRTPTMYLDFTLKPRAQVHQSIPDSWTAFVYIIEGEGVFGAPSSSRAGAHHVLVLGVGEGVSVWNRSSKPLRFVLIAGKPLNEPIVQYGPFVMNTQSEIDQAIEDYHYSKNGFEMAKHWRSQ 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6247404 6249843 - MC05g0763 Mch5g0867 688286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0867 360 CDD cupin_pirin_N 97 194 - -
Mch5g0867 360 Gene3D Jelly Rolls 214 319 IPR014710 -
Mch5g0867 360 PANTHER PIRIN-RELATED 68 360 IPR012093 -
Mch5g0867 360 SUPERFAMILY RmlC-like cupins 80 358 IPR011051 -
Mch5g0867 360 CDD cupin_pirin_C 242 318 - -
Mch5g0867 360 FunFam pirin 93 225 - -
Mch5g0867 360 Gene3D Jelly Rolls 93 345 IPR014710 -
Mch5g0867 360 Pfam Pirin 99 192 IPR003829 -
Mch5g0867 360 Pfam Pirin C-terminal cupin domain 245 349 IPR008778 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1233 Mch-Chr11:8743503 Mch5g0867 Mch-Chr5:6247404 1.74E-152 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0867 K06911 - csv:101205861 540.806