Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0932 ATGGGGTTGTTCTTGTTGGTGGATTTGGTACTTTTGTTGTTGAAGAAGATGTATGTTTGGAAAGCTGGATTGTTTGTAGAATTGGTTGTTTTTGCAGATATGTGTTTGTTGGTGTCTGGTTTAGGTTCAATGTCTTCTGTTGCTGTTTCTTATGGTGAGAAAGGGCCTGTTTTCTGTGGTTTAAAGTCAGATGGGTCTCATCTTGTGAGTTGCTTTGGTTCAAATTCAGCCATAACTTATGGAACCCCTTCTCATTTCCCATTCATTGGTCTCACTGCTGGTGATGGCTTTGTTTGTGGGCTTCTTTTGGATTCCAACCAACCTTATTGTTGGGGAAGCAGTGGGTATGTTCAAATGGGTGTTCCTCAGCCCATGAGCAAAGGAGCTCAATACTTGGAAATCAGTGCCGGTGATTACCACCTCTGTGGACTCCGAACGCCTCTGACTGGACGGCGTAGGAACACATCTTTTGTTGATTGTTGGGGTTACAACATGACCAGAACCTTTGCATTTGATGGCCCGATCGAATCGATCTCGGCAGGTTCTGAGTTCAACTGTGGGCTGTTTTCTCTTAATAGAACTGTTTTCTGTTGGGGTGATGAGACGAGCAGCCGGGTAATCACCTTGGTACCTAAAGATAAGAGGTTTCAAAAGATTGCATCTGGTGGATATCATGTTTGTGGGATTTTAGAGGGCGCGAAGGCGAGAGCCTTCTGTTGGGGAAGGAGCTTAGACATTGAAGAAGAGATCTCAGTTGCATATTCAGGTGAAGGAAATGTGGACTTGGTTCCAGTTGATCCTTTAGACTCTGTTGTTGGGGGCAAATTCCATGCTTGTGGAATCAAGAGCTTGGACCGTGGTGTGATTTGTTGGGGTTTTACGGTCAAACCAAGTACTCCGCCACCGGAGAGGATTAAAGTTTATGACATTGCAGCTGGAGATTACTTCACTTGTGGAATTCTAGCTGAAAAATCTCTCTTGCCTGTTTGCTGGGGCCTCGGATTTCCTACTTCTCTACCTTTAGCTGTCTCGCCTGGAATCTGTAAAGCAACTCCTTGTGCTCCCGGTTTCTACGAAATTAGCCAAGACAGCGCTCGGTGCAAGTCGCCAGGCTTTCATGTGTGCATGCCCTGCAGCACTGCTTGCCCTCCTGAGATGTACCAAAAATTTGAGTGCACCTTAAAATCTGACAGACAATGTGAATATAACTGTTCAATTTGCTTTTCTGGTGAATGCATCTCAAACTGTTCATCCATGTATAAAAATAGTATGATGGGGAAGAAAACTGAGAAGTTCTGGTCAATGCAGCTCCCAGTTCTTGTAGCTGAGATTGCTTTTGGTGTGTTTTTGGTAGCTATTGTGTCTTTAACTGCAATCTTATACGTTCGGTACAAGTTACGGAACTGCCATTGCTCGGGAAAGGAGTTGAAGTCCAAGAAAAGTAAAGGGAATGCCTCTTCCTTCCAGAAGGAGAACTACAAAATACGCCCTGACTTAGACGAGCTGAAAATAAGGAGGGCTCAGATGTTCACCTATGAAGAACTTGAGAGAGCGACGTGCGGGTTTAACGAAGAGTCCATTGTGGGAAAGGGAAGTTTCTCCTGTGTTTTTCGAGGTGTTTTGAAGGACGGGACAGTCGTTGCGGTCAAAAGGGCTATAATGTCTCCCAACATGCAGAAGAATTCAAAAGAGTTTCACACTGAACTTGACTTGCTCTCAAGATTAAACCATGCCCATCTGCTTAATCTGCTTGGTTATTGTGAAGAAGGTGGAGAGAGGCTTCTAGTTTATGAATTTATGGCTTATGGTTCCTTGCATCAGCACCTCCATGGCAAGAACAATGCCTTGAAAGAGCAATTAGATTGGATAAGAAGGGTCACAATTGCAGTCCAAGCAGCTAGGGGAATCGAATACTTGCACGGCTATGCTTGTCCTCCCGTCATTCATCGAGACATCAAGTCGTCGAACATTCTCATCGATGAAGAGCATAATGCTCGAGTCGCTGATTTCGGCTTGTCATTGTTGGGACCGACCGATAGTAGCTCTCCATTAGCAGAGCTACCAGCTGGGACTCTAGGCTATCTCGATCCCGAATACTATAGACTCCATTACCTCACAACCAAGTCTGATGTCTATAGCTTTGGTGTTTTGCTACTAGAAATTCTCAGTGGTAGGAAAGCCATCGATATGCAATATGAAGAAGGGAACATAGTAGAATGGGCAGTGCCTCTGATCAAATCAGGAGACATCTCTGCAATTCTAGATCCGATATTGAAACCGCCTTCCGATATCGAGGCCCTGAAGAGGATTGCAAACGTAGCGTGTAAATGTGTGAGAATGAGAGCGAAGGAGAGGCCATCAATGGACAAAGTGACGACCGCGCTAGAGCGTGCGCTTGCCCAGTTAATGGGAAGCCCGTGTAACGAACAGCCAATCTTACCAACCGAGGTCGTCTTAGGGAGCAGTAGACTGCACAAGAAGTCATCTCAAAGATCATCAAACCGTTCCGCGTCGGAAACGGATATAGCAGAAGCTGAGGATCAAAGGTTCGAGTTCAGAGCCCCGTCGTGGATCACATTCCCAAGTGTGACGTCGTCCCAACGGCGGAAATCATCAGTCTCAGAAGCAGATGTTGATGGGAAGAACTTGGAAGCAAGAAATGTAGGGAATTGTGGAGGTGTGGGGGATGGTTTGAAGAGTTTAGAGGAAGAGATTGGACCTGCTTCCCCTCAGCAAAAGCTGTTCTTGGAGCATAATTTC 2760 45.62 MGLFLLVDLVLLLLKKMYVWKAGLFVELVVFADMCLLVSGLGSMSSVAVSYGEKGPVFCGLKSDGSHLVSCFGSNSAITYGTPSHFPFIGLTAGDGFVCGLLLDSNQPYCWGSSGYVQMGVPQPMSKGAQYLEISAGDYHLCGLRTPLTGRRRNTSFVDCWGYNMTRTFAFDGPIESISAGSEFNCGLFSLNRTVFCWGDETSSRVITLVPKDKRFQKIASGGYHVCGILEGAKARAFCWGRSLDIEEEISVAYSGEGNVDLVPVDPLDSVVGGKFHACGIKSLDRGVICWGFTVKPSTPPPERIKVYDIAAGDYFTCGILAEKSLLPVCWGLGFPTSLPLAVSPGICKATPCAPGFYEISQDSARCKSPGFHVCMPCSTACPPEMYQKFECTLKSDRQCEYNCSICFSGECISNCSSMYKNSMMGKKTEKFWSMQLPVLVAEIAFGVFLVAIVSLTAILYVRYKLRNCHCSGKELKSKKSKGNASSFQKENYKIRPDLDELKIRRAQMFTYEELERATCGFNEESIVGKGSFSCVFRGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAYGSLHQHLHGKNNALKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDISAILDPILKPPSDIEALKRIANVACKCVRMRAKERPSMDKVTTALERALAQLMGSPCNEQPILPTEVVLGSSRLHKKSSQRSSNRSASETDIAEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNLEARNVGNCGGVGDGLKSLEEEIGPASPQQKLFLEHNF 920
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6895834 6898593 - MC05g0806 Mch5g0932 688351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0932 920 FunFam Serine/threonine-protein kinase-like protein CR4 40 207 - -
Mch5g0932 920 Gene3D Phosphorylase Kinase; domain 1 491 599 - -
Mch5g0932 920 Pfam Protein tyrosine and serine/threonine kinase 526 794 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch5g0932 920 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 352 400 IPR001368 GO:0005515(InterPro)
Mch5g0932 920 SUPERFAMILY RCC1/BLIP-II 41 293 IPR009091 -
Mch5g0932 920 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524(InterPro)
Mch5g0932 920 CDD STKc_IRAK 528 797 - -
Mch5g0932 920 FunFam serine/threonine-protein kinase-like protein CCR1 492 599 - -
Mch5g0932 920 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 35 844 - -
Mch5g0932 920 MobiDBLite consensus disorder prediction 823 843 - -
Mch5g0932 920 Gene3D - 16 164 IPR009091 -
Mch5g0932 920 SMART serkin_6 522 799 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g0932 920 MobiDBLite consensus disorder prediction 823 839 - -
Mch5g0932 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch5g0932 920 SUPERFAMILY Protein kinase-like (PK-like) 504 795 IPR011009 -
Mch5g0932 920 FunFam Receptor protein kinase CRINKLY4 600 802 - -
Mch5g0932 920 ProSiteProfiles Protein kinase domain profile. 522 799 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g0932 920 Gene3D - 165 344 IPR009091 -
Mch5g0932 920 Gene3D Transferase(Phosphotransferase) domain 1 600 807 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0797 Mch-Chr1:11594280 Mch5g0932 Mch-Chr5:6895834 1.41E-82 dispersed
Mch5g0932 Mch-Chr5:6895834 Mch9g1468 Mch-Chr9:17112653 6.51E-96 dispersed
Mch5g0932 Mch-Chr5:6895834 Mch4g0126 Mch-Chr4:830538 5.65E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77412 PF07714 PK_Tyr_Ser-Thr 7.50E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0932 - - - 0.0