Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0938 ATGGAGAAACACCCACCCCCAGAGAAATCAGAGAGTTTTTCAAAAAATTTCAACAGAAGAATTGCCAATCTGGGCTCACCTCGCCGGAATCCCGAGGATTCTGCCAAATCCGAATCTGAAAAGCTTGCCGACGACGATGCCTACATCGAGGATCCTCTCTCCGAATCTGACATTGCCGCGCTTTTCGAAGAGGTTGATCAATTCCTCCAGGCTCTGTACAATGCCGGAGACGACGGATCCAATCTCATCCCCGAGGTTCCCGGCGCTGTTCATTCCTTGTCCAAAATGGTGGATTCCACCGTCTCCAGGTACAACGCCGGCAAATATCTCACCAGGCTCGGCAGAGATCAGGATCGGGATTCTTCCTTCTTCCAAGCTCTGGATCGCATTGCCAAGATCGCCATTAAATTAGGGGAATTCCCTCCAAACTCTGCCTTGATTTCTTCGCTCAATCGGACCACCACGGCTTTGCAGCGAGCCATGGCGCTGCTGGACGAGGAATTCAACGCCCTTCTCAAGGAATGCAAACATCGCGAGGTGGATTCCAAATCTGATCGGAAGGCCGCTAAGCAATCGTCGTTCAAAACCATCAACGAATCGCCGGATCAGACCGCTCTTCCCGACTCCTCCGAGTCCGACGACGAGGAATTCCCCTCGTTCTCACCTGAAACCGTATCCAACATGAGCATAATCGCCGGAGCCATGATCTCCGCCGGCTACGAGAAGGAATGCTGTATGACTTACAGCTTTCTCCGCCACAGCTCCTTCAAAGGAATGCTCAACAAGCTCGGCTACGAAAGTATAAGCATAGACGACATACAGAAAATGCCATGGGAGACTCTCCAATCGGAGATAGATAAATGGATCGCCGTCGTGAAGAAATGCTCCAAATCTCTGTTTCCGGGCGAGTGGAAGCTCTGCGACTCTGTTTTCTCTGACCATTCCTTCATATCTCATACGCTCTTCAGCAACCTAACGAGAGCCGTGGTGATCAAGCTTCTCAACTTCGCAAACGCCGTGGTCTTGACGAAGCGATCCGCGGAGAAGCTCTTCAAGCTACTCGATATGTACGAAACGCTCCGTGATTTGATTCCAGCCATCAATGGCTTCCCTGAAAATTGCAAGACAGAGCTAATATCGGAAGCGGACGGGGCGAAGAGCGGGATAGGGGAAGCCGTAATCGGGATTTTCTACGACCTAGAGAGTTCGATCAAAAGCGACAACGCGAAAATTCCAGTTCCGGGAGGCGCAGTCCATCCATTGACGCGTTACATCATGAATTACCTAAAATACGCTTGCGAATACAAAGAAACCCTAGAACAGGTGTTTCAATTTCTGGATCCGAAAATGGAAGAGAATCGGGCGGCGGCGAGAATGGAGGAGAACGACGAAGCGTCGCCGAGAAAGTCACAGCTGGCGATTCAGATCGCGAAGGTGATGGATCTGCTGGACGCGAATCTGGCGATGCGATCGAAGCTGTACCGCGACCCTTCGCTGAGGTACATCTTCCTGATGAACAACGGGAGGTACATCGTGCAGAAAATCAAAGGATCGAACGGAATCACGGAGTTGATGGGGGAGCGGTGGTGCCGGAAGCGGTCGACGAATCTCCGGCAGTACCACAAGAACTACCAGAGGGAAACGTGGAGTAAGGTGCTGCAGTGCCTGAACCACGAGGGATTGCAGGTGAACGGGAAGGTGTCGAAGCCGATCTTGAAGGAGAGATTCAAGAGCTTCAACGCGATGTTCGACGAAATACACAAGACGCAGAGCAGTTGGGTGGTGAGCGACGACCAGCTTCAGTCGGAGCTCCGGATTTCGGTGTCGGCGGTGATGATTCCGGCGTACCGTTCGTTCGTGGGGAGGTTCAAGCAGCACTTCGATCCGGGAAGGCAATCGGAGAAGTACATAAAGTATCAGCCTGAAGATATCGAGGGTTTGATCGATGATCTGTTTGATGGAAATACTGCGTCAATGGCCAGGAGGAGA 1989 51.84 MEKHPPPEKSESFSKNFNRRIANLGSPRRNPEDSAKSESEKLADDDAYIEDPLSESDIAALFEEVDQFLQALYNAGDDGSNLIPEVPGAVHSLSKMVDSTVSRYNAGKYLTRLGRDQDRDSSFFQALDRIAKIAIKLGEFPPNSALISSLNRTTTALQRAMALLDEEFNALLKECKHREVDSKSDRKAAKQSSFKTINESPDQTALPDSSESDDEEFPSFSPETVSNMSIIAGAMISAGYEKECCMTYSFLRHSSFKGMLNKLGYESISIDDIQKMPWETLQSEIDKWIAVVKKCSKSLFPGEWKLCDSVFSDHSFISHTLFSNLTRAVVIKLLNFANAVVLTKRSAEKLFKLLDMYETLRDLIPAINGFPENCKTELISEADGAKSGIGEAVIGIFYDLESSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVFQFLDPKMEENRAAARMEENDEASPRKSQLAIQIAKVMDLLDANLAMRSKLYRDPSLRYIFLMNNGRYIVQKIKGSNGITELMGERWCRKRSTNLRQYHKNYQRETWSKVLQCLNHEGLQVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDDQLQSELRISVSAVMIPAYRSFVGRFKQHFDPGRQSEKYIKYQPEDIEGLIDDLFDGNTASMARRR 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6972480 6974468 - MC05g0811 Mch5g0938 688357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0938 663 FunFam Exocyst subunit Exo70 family protein 108 660 - -
Mch5g0938 663 Pfam Exo70 exocyst complex subunit C-terminal 287 650 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Mch5g0938 663 MobiDBLite consensus disorder prediction 1 15 - -
Mch5g0938 663 MobiDBLite consensus disorder prediction 1 48 - -
Mch5g0938 663 SUPERFAMILY Cullin repeat-like 105 653 IPR016159 -
Mch5g0938 663 Gene3D Exocyst complex component Exo70 107 662 - -
Mch5g0938 663 MobiDBLite consensus disorder prediction 193 207 - -
Mch5g0938 663 MobiDBLite consensus disorder prediction 182 222 - -
Mch5g0938 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 114 655 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch5g0938 663 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1670 Mch-Chr4:19888351 Mch5g0938 Mch-Chr5:6972480 1.36E-202 dispersed
Mch5g0938 Mch-Chr5:6972480 Mch8g1301 Mch-Chr8:9489431 1.37E-102 dispersed
Mch5g0938 Mch-Chr5:6972480 Mch6g0064 Mch-Chr6:380659 2.35E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0938 K07195 - csv:101220402 1095.49