Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1097 AGTTGGCAGCGGACTCTAAGCTTGGCATTCCAAAGCGTGGGAGTGGTGTATGGCGACATCGGAACGTCGCCGTTGTACGTTTACGCAAGCACATTCACAAACGGCATTAAGAACACAGACGACGTGATCGGAGTTCTATCGCTGATAATCTACACGATAGCACTAGTCCCTCTGCTGAAGTACGTTTTCATAGTGCTGTGGGCGAACGACAACGGCGACGGCGGGACGTTCGCTCTTTACTCGCTGCTGTGCCGGTACGCCAAAGTTGGGCTGATTCCGAACCAGCAGCCGGAGGACAGGGAGCTCTCAAATTACCAGCTCGTTGCACCTTCCAACTTGAGGAGGTCTCAGAAGGTGAAGGAGAAGCTCGAGAACAGTGCCGCTGTCAAAATTGCCCTTTTTCTTGTCACCATTGCCGGCACCTCCATGGTTATTGGAGATGGGGTTCTCACTCCATGCATTTCCGAATTTTCCTCTAAATTTCAAATTTACTGCAATATTTTAAAATACATATTTATGCATTTAGATGCAGTGGTGGGGATTTCAGTAGCCATTCTGATAATCCTGTTCTCCATTCAACGCTTCGGGACAGACAAAGTAGGGTTCTCATTTGCGCCAATAATCCTTGTGTGGTTTTCATTCATCGGTGGGATCGGCCTCTACAACTTGTTCAAGCACGATCCCGCTGTGCTCAAAGCTTTTAACCCTAAATATATCTTCGACTACTTCAGACGGAACGGAAAGCAAGCCTGGATCTCCCTTGGCGGCGTTTTCCTCTGCATCACTGGCACCGAGGCCATGTTCGCCGATCTCGGCCATTTCAATGTCCGAGCCATACAGATTAGTTTCTCCTCCATTGTGTTCCCTGCTCTAATAGCAGCCTACACCGGGCAAGCTGCGTATCTCAGAAAATTCCCAGGCCACGTCTTGAATACTTTCTACGACTCAATCCCAGATCCTTTGTACTGGCCCACCTTCGTAGTAGCCGTGGCGGCTTCCATCATAGCGAGCCAGGCCATGATCTCCGGAGCCTTCGCCATAATTTCCCAGTCGCTCTCTCTCGGCTGCTTCCCGCGCGTGAAGGTGGTCCATACATCCCACAAGTACGAGGGCCAAGTTTACATCCCGGAGATCAACTACCTCCTCATGCTGGCCTGCGTCATCGTCACCGTCGCCTTCCGCACCACCGAGAACATCGGCCATGCCTACGGCATCGCCGTCGTCTCCGTCATGATCATGACCACCGCCATGGTCTCCCTTATCATGGTCGTCATCTGGAAGACCAGCATTTGGCTCATCGCCGCCTTCTTCCTTGTCTTCGGCGCCATCGAGCTCCTCTACTTCTCCTCCGTCCTCTATAAGTTCACTCAGGGCGGGTTTCTTCCTCTCGTTCTCGCTTTCTTCCTCATGGCCGTCATGGTCGTGTGGCACTATGTGCATAGGGAGAGGTACATGTTCGAGCTCAGAAACAAGGTTTCTAATAGCTTCATAACGGAGCTAGCAAATAATCATGAGGTTAATAGGATTCCTGGAATTGGGCTTCTCTACTCCGAGCTTGTTCAGGGTATTCCTCCCATCTTCCCTCACTTCATTACCAGCATTCCTTCCGTCCACTCCGTCATCGTCTTCGTCTCGATTAAGTCGATTCCGATCAGTAAAGTCACACCCGGGGAGCGGTTTCTGTTCCGTCAGGTGGAGCCGAGGGAGTACCACATGTTTCGGTGTGTCGTGAGGTATGGTTATAAAGACGTCATAATCGGATCGGCGGAGTTCGAGCGCCAATTGGTGGATAGCCTGAAAGAGTTCATACGCCAAGAACATATAATGCTAGAAGGGATCCCAAATTTGTTTGTAGAACAACCGACGTTATCGAACCAGCAAAACACAACCCGCTCGGGGAAGCTAGAAGCAAAAACAAAAGTAAAAGCTTCATCTTCTTCTTCAGCAACAGTCCATGTCGAAGGAACGCTACCAGAAGGAGGAAGCCAGTCTCGAGGCTCGTCGGGCTCGATTCAGTCTTTCAACGCTTCGAAGTCGAGGAGCTCTTCAAACGCAATAGTGCAAGTGGTGGCGCCATTGGCGGAGGGAGTGGAAGAGGAGATGGAGTTCGTGGAGAGAGCGATGAAGAAAGGCGTGGTTTATCTGCTCGGGGAAGCAGAAGTAGTAGCGGATCCAAAATCTTCGTTGCTAAAGAAGATGGTGGTTAACTACGCTTATAGTTTTCTCAGGAAGAACTTCAGGCAAGGAGAGAACGTTCTGGAGATTCCACACACCAGGCTTCTCAGGGTTGGAATGACTTATGAAATATGA 2310 50.39 SWQRTLSLAFQSVGVVYGDIGTSPLYVYASTFTNGIKNTDDVIGVLSLIIYTIALVPLLKYVFIVLWANDNGDGGTFALYSLLCRYAKVGLIPNQQPEDRELSNYQLVAPSNLRRSQKVKEKLENSAAVKIALFLVTIAGTSMVIGDGVLTPCISEFSSKFQIYCNILKYIFMHLDAVVGISVAILIILFSIQRFGTDKVGFSFAPIILVWFSFIGGIGLYNLFKHDPAVLKAFNPKYIFDYFRRNGKQAWISLGGVFLCITGTEAMFADLGHFNVRAIQISFSSIVFPALIAAYTGQAAYLRKFPGHVLNTFYDSIPDPLYWPTFVVAVAASIIASQAMISGAFAIISQSLSLGCFPRVKVVHTSHKYEGQVYIPEINYLLMLACVIVTVAFRTTENIGHAYGIAVVSVMIMTTAMVSLIMVVIWKTSIWLIAAFFLVFGAIELLYFSSVLYKFTQGGFLPLVLAFFLMAVMVVWHYVHRERYMFELRNKVSNSFITELANNHEVNRIPGIGLLYSELVQGIPPIFPHFITSIPSVHSVIVFVSIKSIPISKVTPGERFLFRQVEPREYHMFRCVVRYGYKDVIIGSAEFERQLVDSLKEFIRQEHIMLEGIPNLFVEQPTLSNQQNTTRSGKLEAKTKVKASSSSSATVHVEGTLPEGGSQSRGSSGSIQSFNASKSRSSSNAIVQVVAPLAEGVEEEMEFVERAMKKGVVYLLGEAEVVADPKSSLLKKMVVNYAYSFLRKNFRQGENVLEIPHTRLLRVGMTYEI 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9231756 9238942 + MC05g0923 Mch5g1097 688516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1097 769 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 769 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch5g1097 769 Pfam K+ potassium transporter C-terminal domain 510 769 IPR053952 -
Mch5g1097 769 MobiDBLite consensus disorder prediction 624 676 - -
Mch5g1097 769 MobiDBLite consensus disorder prediction 624 653 - -
Mch5g1097 769 NCBIfam potassium uptake protein 8 769 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch5g1097 769 MobiDBLite consensus disorder prediction 660 676 - -
Mch5g1097 769 Pfam K+ potassium transporter integral membrane domain 8 496 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1097 Mch-Chr5:9231756 Mch9g0768 Mch-Chr9:5746091 9.82E-263 dispersed
Mch5g1097 Mch-Chr5:9231756 Mch8g2202 Mch-Chr8:25070505 2.19E-281 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1097 K03549 - csv:101205628 1194.49