Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g1195 | GCGTACCAAAGGCGCTTCTTCTTTCTGTTTTTCCGGTTCTCTCGGTTGGGTCTGCTTATTTGCAGTCTCGCGGACGCACAAAGCAGGCGACAAGGCAATTTAGGTCACACGAAGAAGCTGTCAATGGAGTTGGTAACGGAGAAGAAGGAATTCGATGCTGCAAACGACAACAAGCAGCTCAACACTGCTCAAACAGTTCTTGATTCTTCTTATCCACCCTCACTCGCCGCCGATGACTCCTCTAATCATAACAATACTAAAGAAGTTGAAGATTTGAGTGAACGCGTCGCTCGAGACCTCAAAGATGGCCTTCATCCTCTAAAGCACAAGTTCGCATTTTGGTACACTCGTCGGACACCTGGAGTTCGGACTCAAACATCATATGAGGACAATATAAAAAAGATTGTGGACTTTAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCCTCTTCATTGCCAAGCCCAACAGATCTGCATCTTTTTAAGGAAGGAATACGCCCACTCTGGGAGGACTCTGCTAACTGCAATGGTGGGAAGTGGATTATAAGATTTAAGAAAGTTGTATCTGGTCGGTTTTGGGAAGATTTGGTTCTCGCATTAGTGGGCGACCAACTTGATTTCGGCGATAACATATGTGGTGCCGTACTTAGCATTCGTTTCAACGAGGATATTTTGAGTGTCTGGAACCGCAATGCATCCGATCATCAGGCCGTGATGGGTTTGCGAGATTCAATCAAACGGCACTTAAAGCTCCCACATGGGTATGTCATGGAATACAAACCCCACGACGCGTCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGTGA | 855 | 46.55 | AYQRRFFFLFFRFSRLGLLICSLADAQSRRQGNLGHTKKLSMELVTEKKEFDAANDNKQLNTAQTVLDSSYPPSLAADDSSNHNNTKEVEDLSERVARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 11190530 | 11197205 | - | MC05g0987 | Mch5g1195 | 688614 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g1195 | 284 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 76 | 277 | IPR023398 | - | |
Mch5g1195 | 284 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 79 | 272 | IPR001040 | GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0006413(InterPro)|GO:0016281(PANTHER) | |
Mch5g1195 | 284 | Pfam | Eukaryotic initiation factor 4E | 106 | 264 | IPR001040 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
Mch5g1195 | 284 | SUPERFAMILY | eIF4e-like | 81 | 280 | IPR023398 | - | |
Mch5g1195 | 284 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 162 | 185 | IPR019770 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro) | |
Mch5g1195 | 284 | FunFam | Eukaryotic translation initiation factor NCBP | 76 | 277 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch5g1195 | Mch-Chr5:11190530 | Mch8g2609 | Mch-Chr8:29306077 | 3.17E-37 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch5g1195 | K03259 | - | csv:101204290 | 452.981 |