Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1195 GCGTACCAAAGGCGCTTCTTCTTTCTGTTTTTCCGGTTCTCTCGGTTGGGTCTGCTTATTTGCAGTCTCGCGGACGCACAAAGCAGGCGACAAGGCAATTTAGGTCACACGAAGAAGCTGTCAATGGAGTTGGTAACGGAGAAGAAGGAATTCGATGCTGCAAACGACAACAAGCAGCTCAACACTGCTCAAACAGTTCTTGATTCTTCTTATCCACCCTCACTCGCCGCCGATGACTCCTCTAATCATAACAATACTAAAGAAGTTGAAGATTTGAGTGAACGCGTCGCTCGAGACCTCAAAGATGGCCTTCATCCTCTAAAGCACAAGTTCGCATTTTGGTACACTCGTCGGACACCTGGAGTTCGGACTCAAACATCATATGAGGACAATATAAAAAAGATTGTGGACTTTAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCCTCTTCATTGCCAAGCCCAACAGATCTGCATCTTTTTAAGGAAGGAATACGCCCACTCTGGGAGGACTCTGCTAACTGCAATGGTGGGAAGTGGATTATAAGATTTAAGAAAGTTGTATCTGGTCGGTTTTGGGAAGATTTGGTTCTCGCATTAGTGGGCGACCAACTTGATTTCGGCGATAACATATGTGGTGCCGTACTTAGCATTCGTTTCAACGAGGATATTTTGAGTGTCTGGAACCGCAATGCATCCGATCATCAGGCCGTGATGGGTTTGCGAGATTCAATCAAACGGCACTTAAAGCTCCCACATGGGTATGTCATGGAATACAAACCCCACGACGCGTCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGTGA 855 46.55 AYQRRFFFLFFRFSRLGLLICSLADAQSRRQGNLGHTKKLSMELVTEKKEFDAANDNKQLNTAQTVLDSSYPPSLAADDSSNHNNTKEVEDLSERVARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11190530 11197205 - MC05g0987 Mch5g1195 688614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1195 284 Gene3D RNA Cap, Translation Initiation Factor Eif4e 76 277 IPR023398 -
Mch5g1195 284 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 79 272 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Mch5g1195 284 Pfam Eukaryotic initiation factor 4E 106 264 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Mch5g1195 284 SUPERFAMILY eIF4e-like 81 280 IPR023398 -
Mch5g1195 284 ProSitePatterns Eukaryotic initiation factor 4E signature. 162 185 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Mch5g1195 284 FunFam Eukaryotic translation initiation factor NCBP 76 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1195 Mch-Chr5:11190530 Mch8g2609 Mch-Chr8:29306077 3.17E-37 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1195 K03259 - csv:101204290 452.981