Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g1309 | ATGATTCTCTTTCTCCTCCCTCTCTTCTTCATCCTCGCCTTCAGCCTCTACCGCCGCCTCCGCTTCCTGCTGCCCCCCGGACCCCGCCCCCTTCCGGTCGTCGGCAACCTCTACGACGTCCAGCCGGTCCGGTTCCGATGCTACGCCGAGTGGGCCCGGCAGTACGGCCCGATCATATCGGTCTGGTTCGGGTCCACCCTAAACGTCGTCGTCTCCAACTCCGACCTCGCCAGAGAGGTCCTGAAGGAGCACGATCAGAGCCTGGCCAACCGCCACCGGACCAGATCGGCGGCCAAATTCAGCCGCGACGGCCAGGACCTGATTTGGGCCGATTATGGGCCCCACTACGTGAAGGTGAGGAAAGTTTGTACCATTGAGCTTTTCTCTCCGAAGCGCCTCGAATCTCTCAGGCCCATTAGAGAAGATGAAGTCACCGCCATGGTTGAAGACATCTTCAACTGCTGCACTAACCCTGGGAAGAGTTTGAAGCTGAGGGAGTTCCTGGGAGCAGTGTCATTCAACAACATCACAAGACTCGCATTCGGGAAGAGGTTCGTGAACTCCAATGGCGTTATGGACGAGCAGGGCCTGGAATTCAAGGCCATCGTCGCCAATGGCCTTAAGCTCGGCGCCTCCCTCGCCATGGCGGAGCACATCCCCTGGCTCCGCTGGATGTTCCCTCTCGAAGAGGGTGCCTTCGCCAAGCACGGCGCCCGCCGCGATCGCCTCACTCGGGCCATCATGGAGGAGCACACGCAAGCTCGTAATCGCAGCGGCAATGTCAAGAACCACTTCGTCGATGCTCTCCTCACTCTCAAAGACAAGTACGATCTCAGTGAAGACACCATCATCGGCCTCCTTTGGGATATGATCACCGCCGGGACGGACACGACTGCGATTTCGGTGGAATGGGCGATGGCGGAGATTGTAAAGAACCCTAGAGTGCAGAAGAAGGCACATGAAGAATTAGACAAGGCGATTGGAGTGGATCGGATCATGACAGAGAGCGACTTTTCAAATCTGCCGTATCTCCAAAGCGTGGTGAAGGAGGCGTTGAGACTGCATCCTCCGACGCCATTGATGCTGCCGCACCGATCAAACGCCAACGTCAAAGTCGGGGGCTACGACATCCCCAAGGGCTCGAACGTGCTCGTGAACGTGTGGGCGGTGGCGCGTGACCCGGCGGTGTGGAAGAACCCGGAGGAGTTCCGGCCGGAGCGGTTCCTGGAGGAGGATGTGGATATGAAAGGACACGATCTCCGGCTGCTACCGTTCGGGGCAGGGCGGCGCGTGTGCCCGGGGGCCCAATTGGGGATCAATCTGGTGACCTCCATGTTGGGGCATCTGCTGCACCACTTTGAATGGGCGCCGGCGCCGGGAGTGAAGGCGGAGGAGATCGACACGTCGGAGAGCCCGGGAGTGGTGTCGTACATGAGGACTCCGGTGGAGGCCGTGGCCACTCCCAGGCTGCCTTCAGAACTCTACAAACGTGTGCCGGTGGACATGTAA | 1509 | 59.51 | MILFLLPLFFILAFSLYRRLRFLLPPGPRPLPVVGNLYDVQPVRFRCYAEWARQYGPIISVWFGSTLNVVVSNSDLAREVLKEHDQSLANRHRTRSAAKFSRDGQDLIWADYGPHYVKVRKVCTIELFSPKRLESLRPIREDEVTAMVEDIFNCCTNPGKSLKLREFLGAVSFNNITRLAFGKRFVNSNGVMDEQGLEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEGAFAKHGARRDRLTRAIMEEHTQARNRSGNVKNHFVDALLTLKDKYDLSEDTIIGLLWDMITAGTDTTAISVEWAMAEIVKNPRVQKKAHEELDKAIGVDRIMTESDFSNLPYLQSVVKEALRLHPPTPLMLPHRSNANVKVGGYDIPKGSNVLVNVWAVARDPAVWKNPEEFRPERFLEEDVDMKGHDLRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFEWAPAPGVKAEEIDTSESPGVVSYMRTPVEAVATPRLPSELYKRVPVDM | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 13961575 | 13966923 | - | MC05g1033 | Mch5g1309 | 688728 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g1309 | 502 | FunFam | Cytochrome P450 | 18 | 493 | - | - | |
| Mch5g1309 | 502 | Gene3D | Cytochrome P450 | 19 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PANTHER | CYTOCHROME P450 98A9 | 4 | 496 | - | - | |
| Mch5g1309 | 502 | Pfam | Cytochrome P450 | 25 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | SUPERFAMILY | Cytochrome P450 | 25 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PRINTS | E-class P450 group I signature | 282 | 299 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PRINTS | E-class P450 group I signature | 386 | 410 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PRINTS | E-class P450 group I signature | 422 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PRINTS | E-class P450 group I signature | 52 | 71 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PRINTS | E-class P450 group I signature | 302 | 328 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PRINTS | E-class P450 group I signature | 432 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PRINTS | E-class P450 group I signature | 171 | 189 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PRINTS | E-class P450 group I signature | 345 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PRINTS | E-class P450 group I signature | 76 | 97 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | CDD | CYP98 | 55 | 484 | - | - | |
| Mch5g1309 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 425 | 434 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch5g1309 | 502 | PRINTS | P450 superfamily signature | 346 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PRINTS | P450 superfamily signature | 293 | 310 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1309 | 502 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0252 | Mch-Chr11:1568529 | Mch5g1309 | Mch-Chr5:13961575 | 1.80E-52 | dispersed | |
| Mch4g1994 | Mch-Chr4:22319813 | Mch5g1309 | Mch-Chr5:13961575 | 8.45E-66 | dispersed | |
| Mch5g1309 | Mch-Chr5:13961575 | Mch8g1025 | Mch-Chr8:7237681 | 1.41E-117 | dispersed | |
| Mch8g2594 | Mch-Chr8:29084628 | Mch5g1309 | Mch-Chr5:13961575 | 3.43E-75 | dispersed | |
| Mch5g1309 | Mch-Chr5:13961575 | Mch1g1246 | Mch-Chr1:14737877 | 2.12E-90 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch5g1309 | K09754 | - | csv:101217257 | 869.766 |