Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1316 AGGAAACACACTCACAAGCTCTTCTTGAGCTGTTTGTTCTTCCTCTCTCTCAATTTTTTTTCTTCTGCAACTTTCTCTGCAAAATATATATATAAACTCTCCCTTTTTAGCATCATAATCATGGGGTTCATAGGATGTCTTGGCCGTTTCTTTCATAATGCAAAGCCTTACATCGGAGTCATCTCCCTCCAATTCGGCTACGCCGGTATGAACATCATCTCGACCGTCTCCCTCAACCGAGGCATGAGCCACTACGTCCTCGTCGTCTACCGCCACGCCTTCGCTACCGCTGCTGTCGCTCCTTTCGCTCTCGTTCTCGAGAGGAAAGTGAGACCCAAGATTACATTTAAGATCTTCATTGAGATGTTTGTTTTGGGTCTTCTTGGACCATTGATCGATCAGAACTTTTACTATGTGGGGCTCAAAATGACATCCCCAACTTTCTCTTGTGCCATAAGCAACATGCTTCCTGCAATGACATTCGTGATGGCAGTACTTTGCAGGATGGAGAAGCTGGACTTAAGGAAAGTGAGATGCCAAGCAAAGTTGTTTGGGACAATAGTAACGGTGATGGGAGCCATGTTGATGACATTTTACAAAGGGAGTGTGATCAACTTCTTCTGGACTGGGCACGGCAGTCACGTGAGCTCGCCGCCTCCGGCCAACGCGGCGCTTGACCACCACAACGACGGAGAGTTCATCAAGGGCTCCATTTTGCTCATCATCGCCACTCTGGCTTGGGCTGCCTTCTTCATCCTTCAGGTCATAACCCTGAGAAAATACACCGCTCATCTTTCGCTGACCGCCATGGTTTGCTTTTTGGGTACCCTTCAGGCCATCGTCGTCACCCTTGCCATGGAACACCGCCGCTCCGCCTGGGCCATCGGCTGGGACTTGAACCTTCTCGCCGCCGCTTATGCGGGGATTGTGACATCTGGAGTGGCATATTATGTGCAAGGTTTGGTTATGAAGACAAGAGGGCCAGTTTTTGTCACAGCTTTCAGTCCTCTGATGATGGTGATTGTTGCCTTCATGGGCTCTCTCATCCTTGCTGAGAAGATTTACGTTGGAGGGATAATTGGAGCAGTGCTGATTGTAATAGGGCTGTACTCTGTTTTGTGGGGGAAATACAAAGAAAGCAAAGAGAAGAAGGAAGGTGGAGAAATTGTTGAAGCAGTGAAAGGTGGAGAATTATTGCCTGTAATAAATGAAGACATTATTGAAGCAATCCAAAAGAAACAAGCTTTGGCCATTAACATTCCACCCATGGCTGGACCCAACATGGAAAACAAGCTTCAAACCACTAATCAGCCAAATTAA 1320 47.27 RKHTHKLFLSCLFFLSLNFFSSATFSAKYIYKLSLFSIIIMGFIGCLGRFFHNAKPYIGVISLQFGYAGMNIISTVSLNRGMSHYVLVVYRHAFATAAVAPFALVLERKVRPKITFKIFIEMFVLGLLGPLIDQNFYYVGLKMTSPTFSCAISNMLPAMTFVMAVLCRMEKLDLRKVRCQAKLFGTIVTVMGAMLMTFYKGSVINFFWTGHGSHVSSPPPANAALDHHNDGEFIKGSILLIIATLAWAAFFILQVITLRKYTAHLSLTAMVCFLGTLQAIVVTLAMEHRRSAWAIGWDLNLLAAAYAGIVTSGVAYYVQGLVMKTRGPVFVTAFSPLMMVIVAFMGSLILAEKIYVGGIIGAVLIVIGLYSVLWGKYKESKEKKEGGEIVEAVKGGELLPVINEDIIEAIQKKQALAINIPPMAGPNMENKLQTTNQPN 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14029411 14032126 - MC05g1036 Mch5g1316 688735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1316 439 SUPERFAMILY Multidrug resistance efflux transporter EmrE 277 377 - -
Mch5g1316 439 Pfam EamA-like transporter family 61 197 IPR000620 GO:0016020(InterPro)
Mch5g1316 439 Pfam EamA-like transporter family 235 373 IPR000620 GO:0016020(InterPro)
Mch5g1316 439 PANTHER WAT1-RELATED PROTEIN 60 384 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch5g1316 439 SUPERFAMILY Multidrug resistance efflux transporter EmrE 90 199 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1761 Mch-Chr4:20627065 Mch5g1316 Mch-Chr5:14029411 1.14E-115 dispersed
Mch4g1762 Mch-Chr4:20633828 Mch5g1316 Mch-Chr5:14029411 7.35E-103 dispersed
Mch4g1885 Mch-Chr4:21532686 Mch5g1316 Mch-Chr5:14029411 2.87E-75 dispersed
Mch4g2113 Mch-Chr4:23195641 Mch5g1316 Mch-Chr5:14029411 6.66E-108 dispersed
Mch5g1316 Mch-Chr5:14029411 Mch9g1707 Mch-Chr9:19031676 2.60E-159 dispersed
Mch1g0473 Mch-Chr1:9178636 Mch5g1316 Mch-Chr5:14029411 3.93E-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1316 - - - 0.0