Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g1318 | ATGGACATTTTTCTTGCAGTTCTGATCCTCACCTCTCTCTCCGTTTGCCTTTACCTTCGTTTGAAGAAATCCAAAGCCCACGAAGGTTTCAAAAACTTTCCCATTGTCGGAACCCTGCCGCTCTTCCTATGGAACCGCCACCGTTATCTGGATTGGACGGCGGAGGTGATCAGCAACTGCCGCACCAGCACGGCAGTGTTCCGGCGGCCGGGGAAGGTCCACGGAGTGATAACGGCGAACCCAGATGTGGTGGAGCACATGCTGAAGACCCACTTCGAGAACTACCCGAAAGGGGAACGCTTCGTTTCTCTTTTGGAGGATTTTCTCGGCGGCGGAATCTTCAACTCCGACGGCGAAATCTGGAGGGTCCAGAGGAAGACGGCCAGCTACGAATTCAACACCAGATCGCTGAGGAATTTTGTGATGGAAAATGTTGCGATGGAGATTGGGAGGAGGCTGATTCCTGTTTTCGAAAGGGCTTCGGAAACGGGGCGGGTCTTGGATTTGCAGGACGTTTTGGAGCGGTTTTCGTTTGATAATGTCTGCAAATTGGCTTTTGATTACGATCCGGGTTGTCTCGGCGGCGATGGCACCACCGGCGCTGAGTTCATGCGCGCTTTCGCCAACGCCGCCACGCTCAGCTACGGCAGATTCATGTATGCTATTCCAAATTGGTACAAAGTGAAGAGATTTTTCAACTTGGGATCAGAGAGAACACTAAAAGAATCCATAGCCACAGTCCACAAATTCGCAGACAACATCATATGCTCAAGAATGGAAGAGAAAAAGAAGAACAACCAGAAGAAGGATCAAGATCTCTTATCCCGTTTCATGGGAGACGAGCAAAATAAACCTTCCCCAGAATTCCTCCGAGACATCATCATAAGCTTCATCCTCGCCGGCCGTGACGCCACCTCGTCAGCCCTCACGTGGTTCTTCTGGATCTTATCCTCCCGACCACACGTCCAACAAAACATCCTAATAGAACTCGAAACGCTCCGGTCAAAGCGAACCAAAGAAAGAACAGCGTACAGATTCGACGAGCTCCGGGACATGCATTATCTTCAAGCAGCCCTGTCGGAGACAATGCGGCTGTACCCGCCGGTACCGATGGACACGAGAACTTGTCGGAGCGACGACGTGTTACCGGACGGGACGGCGGTCGGGAAGGATTGGTTTGTGGCGTACCATACTTATGCGATGGGGAGGATGGAGAGCATATGGGGGGAGGATTATGGGGAGTTCAGGCCAGAGAGGTGGCTGGAGATCAATGGGGTTTTCCGGACAGAGAGCCCGTTTCGATTCCCGGTGTTTCACGCCGGGCCGAGGATGTGCCTGGGGAAGGACATGGCCTTTATTCAGATGAAGTCCATTGCAGCCGCTGTGATTGAGAGGTTCCATGTGGAAGTGGTGGAGAACGAGAAAGCTCCAAAGTATTTGCTTTCACTGACGCTGAGGATGGAGAACGGGCTGCAGGTGATGCTAAAAAAGAGGCACACCATGGATCTACTTAGTTAA | 1518 | 51.98 | MDIFLAVLILTSLSVCLYLRLKKSKAHEGFKNFPIVGTLPLFLWNRHRYLDWTAEVISNCRTSTAVFRRPGKVHGVITANPDVVEHMLKTHFENYPKGERFVSLLEDFLGGGIFNSDGEIWRVQRKTASYEFNTRSLRNFVMENVAMEIGRRLIPVFERASETGRVLDLQDVLERFSFDNVCKLAFDYDPGCLGGDGTTGAEFMRAFANAATLSYGRFMYAIPNWYKVKRFFNLGSERTLKESIATVHKFADNIICSRMEEKKKNNQKKDQDLLSRFMGDEQNKPSPEFLRDIIISFILAGRDATSSALTWFFWILSSRPHVQQNILIELETLRSKRTKERTAYRFDELRDMHYLQAALSETMRLYPPVPMDTRTCRSDDVLPDGTAVGKDWFVAYHTYAMGRMESIWGEDYGEFRPERWLEINGVFRTESPFRFPVFHAGPRMCLGKDMAFIQMKSIAAAVIERFHVEVVENEKAPKYLLSLTLRMENGLQVMLKKRHTMDLLS | 505 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 14059803 | 14064921 | - | MC05g1038 | Mch5g1318 | 688737 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g1318 | 505 | Gene3D | Cytochrome P450 | 17 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1318 | 505 | PRINTS | P450 superfamily signature | 300 | 317 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1318 | 505 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1318 | 505 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1318 | 505 | PRINTS | P450 superfamily signature | 445 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1318 | 505 | SUPERFAMILY | Cytochrome P450 | 20 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1318 | 505 | Pfam | Cytochrome P450 | 31 | 480 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1318 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch5g1318 | 505 | PANTHER | CYTOCHROME P450 | 16 | 491 | - | - | |
| Mch5g1318 | 505 | CDD | CYP86A | 64 | 491 | - | - | |
| Mch5g1318 | 505 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1318 | 505 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1318 | 505 | PRINTS | E-class P450 group I signature | 309 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1318 | 505 | PRINTS | E-class P450 group I signature | 356 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1318 | 505 | PRINTS | E-class P450 group I signature | 289 | 306 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch5g1318 | Mch-Chr5:14059803 | Mch6g2006 | Mch-Chr6:22462114 | 9.95E-143 | dispersed | |
| Mch5g1318 | Mch-Chr5:14059803 | Mch5g1320 | Mch-Chr5:14078649 | 9.16E-282 | proximal |
Pathway information