Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g1320 | ATGCAATTGTTATTCTACAAATTTCCATCATTTCTAATTTGGATTTTAGTATCTCTCTTTGCAAATAATTCATTCGAAAAGAAAAAGAAAAAAAAAGGAAAAAGGAAAAAAAAAATTGTATCTTTCTTCTCCACTGGCGGTGCCATGGATATCTGGATGGCGATGCTTCTCATCATCACTCTCCTCTTCCCTCTTCTTTTCCTTCGTTTCTTCGGTTCACGAAATAAGGAAGGTTTCAGAAACTTCCCGATATTCGGGACGTTGCCGGACTTCTTGGCGAACCGGCACCGTTTTCTGGACTGGTCGACGGAGGTGCTTCGGAAGTGCCGCGGAAACACAGCGGTGTTCCGGCGGCCGGGGAAGGTTCAGGGTGTGATAACGGCGAACCCAGAAGTGGTGGAGCATATTCTGAAGACCCAGTTCGAGAACTACCCGAAAGGGGATCGCTTCATTTCGCTGCTGGAGGATTTTCTGGGCCGCGGAATCTTCAACTGCGACGGCCCAAACTGGCGAGCCCAGAGGAAGACGGCCAGCTACGAGTTCAACACCAAATCGCTGAGGAATTTTGTGATGGAAAACGTTGCGGTGGAGATTGGGACCAGGCTGGTTCCTGTTCTCGAAAGGGCTTCTGAAACAGGGCGGGGTTTGGATTTGCAGGACGTTTTGGAGCGATTCACGTTCGATAATGTCTGCAAATTGGCTTTCGATTTCGATCCCGGCTGTCTCAGCGGCGACGCCACCGCCGGCGCCGACTTCATGCGCGCTTTCGAGGACGCCGCCACGCACAGCTCCGGCAGATTCTTGTATGCTATCCCAAATTCGTACAAAATGAAGAGATTTTTCAACGTGGGATCAGAGAAAACTCTAAGACAATCCATAGCCACAGTCCACAAATTTGCAGACAACATCATACACTCAAGAATAGAAGAGACCAAGAAGACGACGAGCCATAAGAAGGATCAAGATTTGTTATCCCGTTTCATGGGAGACGAAAACAATTACTCCCCAGAATTACTCCGAGACATTGTCATAAGCTTCATCCTCGCCGGCCGCGACACCACATCCTCAGCTCTAACATGGTTCTTCTGGATCCTATCCTCCCGACCGGACATCGAACAAAACATCCTTGCAGAACTCAAAACACTCCGGTCCAAGCGAACCGGAGATGAAGAAACCAAAGTGGGACTGTACACCTATGACGAGCTCCGAAACATGCAGTATCTCCAAGCGGCTTTATCGGAGACTCTCCGGCTGTATCCGCCGGTGGCGGTGGACACGAAGGCCTGTGGGAGCGATGACGTGTTACCAGACGGGACGGCGGTCAAGAAGAGCTGGTTCGTGACGTACCATACGTATGCGATGGGGAGGATGGAGAGCATATGGGGAAAGGATTACGGGGAGTTTAGACCGGAGAGGTGGCTCGAGAATGGGGTCTGCCGGATGGAGAGCCCGTTCCGATTCCCGGTGTTTCACGCCGGCCCGAGGATGTGTCTGGGGAAGGACATGGCCTTTATTCAGATGAAGTCCATAGTTGCTGCTGTGATTGAGAGGTTTCATGTGGAAATGGTGGAGAAGGAGAAAGCTCCAAAGCAAATGCTTTCACTAACGTTGAGGATGGAGAATGGGCTGCAGGTGATGCCCAAAAAGAGAGACACAGTGGACCTACCTGGTTAA | 1674 | 50.42 | MQLLFYKFPSFLIWILVSLFANNSFEKKKKKKGKRKKKIVSFFSTGGAMDIWMAMLLIITLLFPLLFLRFFGSRNKEGFRNFPIFGTLPDFLANRHRFLDWSTEVLRKCRGNTAVFRRPGKVQGVITANPEVVEHILKTQFENYPKGDRFISLLEDFLGRGIFNCDGPNWRAQRKTASYEFNTKSLRNFVMENVAVEIGTRLVPVLERASETGRGLDLQDVLERFTFDNVCKLAFDFDPGCLSGDATAGADFMRAFEDAATHSSGRFLYAIPNSYKMKRFFNVGSEKTLRQSIATVHKFADNIIHSRIEETKKTTSHKKDQDLLSRFMGDENNYSPELLRDIVISFILAGRDTTSSALTWFFWILSSRPDIEQNILAELKTLRSKRTGDEETKVGLYTYDELRNMQYLQAALSETLRLYPPVAVDTKACGSDDVLPDGTAVKKSWFVTYHTYAMGRMESIWGKDYGEFRPERWLENGVCRMESPFRFPVFHAGPRMCLGKDMAFIQMKSIVAAVIERFHVEMVEKEKAPKQMLSLTLRMENGLQVMPKKRDTVDLPG | 557 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 14078649 | 14081714 | + | MC05g1039 | Mch5g1320 | 688739 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g1320 | 557 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 490 | 499 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch5g1320 | 557 | PRINTS | P450 superfamily signature | 349 | 366 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | PRINTS | P450 superfamily signature | 410 | 421 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | PRINTS | P450 superfamily signature | 497 | 508 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | PRINTS | P450 superfamily signature | 488 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | PANTHER | CYTOCHROME P450 | 62 | 543 | - | - | |
| Mch5g1320 | 557 | Gene3D | Cytochrome P450 | 67 | 554 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | SUPERFAMILY | Cytochrome P450 | 69 | 550 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | FunFam | Cytochrome P450 | 71 | 553 | - | - | |
| Mch5g1320 | 557 | Pfam | Cytochrome P450 | 78 | 534 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | PRINTS | E-class P450 group I signature | 409 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | PRINTS | E-class P450 group I signature | 497 | 520 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | PRINTS | E-class P450 group I signature | 358 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | PRINTS | E-class P450 group I signature | 338 | 355 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | PRINTS | E-class P450 group I signature | 487 | 497 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1320 | 557 | CDD | CYP86A | 113 | 543 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch5g1320 | Mch-Chr5:14078649 | Mch6g2006 | Mch-Chr6:22462114 | 4.07E-142 | dispersed | |
| Mch5g1318 | Mch-Chr5:14059803 | Mch5g1320 | Mch-Chr5:14078649 | 9.16E-282 | proximal |
Pathway information