Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1320 ATGCAATTGTTATTCTACAAATTTCCATCATTTCTAATTTGGATTTTAGTATCTCTCTTTGCAAATAATTCATTCGAAAAGAAAAAGAAAAAAAAAGGAAAAAGGAAAAAAAAAATTGTATCTTTCTTCTCCACTGGCGGTGCCATGGATATCTGGATGGCGATGCTTCTCATCATCACTCTCCTCTTCCCTCTTCTTTTCCTTCGTTTCTTCGGTTCACGAAATAAGGAAGGTTTCAGAAACTTCCCGATATTCGGGACGTTGCCGGACTTCTTGGCGAACCGGCACCGTTTTCTGGACTGGTCGACGGAGGTGCTTCGGAAGTGCCGCGGAAACACAGCGGTGTTCCGGCGGCCGGGGAAGGTTCAGGGTGTGATAACGGCGAACCCAGAAGTGGTGGAGCATATTCTGAAGACCCAGTTCGAGAACTACCCGAAAGGGGATCGCTTCATTTCGCTGCTGGAGGATTTTCTGGGCCGCGGAATCTTCAACTGCGACGGCCCAAACTGGCGAGCCCAGAGGAAGACGGCCAGCTACGAGTTCAACACCAAATCGCTGAGGAATTTTGTGATGGAAAACGTTGCGGTGGAGATTGGGACCAGGCTGGTTCCTGTTCTCGAAAGGGCTTCTGAAACAGGGCGGGGTTTGGATTTGCAGGACGTTTTGGAGCGATTCACGTTCGATAATGTCTGCAAATTGGCTTTCGATTTCGATCCCGGCTGTCTCAGCGGCGACGCCACCGCCGGCGCCGACTTCATGCGCGCTTTCGAGGACGCCGCCACGCACAGCTCCGGCAGATTCTTGTATGCTATCCCAAATTCGTACAAAATGAAGAGATTTTTCAACGTGGGATCAGAGAAAACTCTAAGACAATCCATAGCCACAGTCCACAAATTTGCAGACAACATCATACACTCAAGAATAGAAGAGACCAAGAAGACGACGAGCCATAAGAAGGATCAAGATTTGTTATCCCGTTTCATGGGAGACGAAAACAATTACTCCCCAGAATTACTCCGAGACATTGTCATAAGCTTCATCCTCGCCGGCCGCGACACCACATCCTCAGCTCTAACATGGTTCTTCTGGATCCTATCCTCCCGACCGGACATCGAACAAAACATCCTTGCAGAACTCAAAACACTCCGGTCCAAGCGAACCGGAGATGAAGAAACCAAAGTGGGACTGTACACCTATGACGAGCTCCGAAACATGCAGTATCTCCAAGCGGCTTTATCGGAGACTCTCCGGCTGTATCCGCCGGTGGCGGTGGACACGAAGGCCTGTGGGAGCGATGACGTGTTACCAGACGGGACGGCGGTCAAGAAGAGCTGGTTCGTGACGTACCATACGTATGCGATGGGGAGGATGGAGAGCATATGGGGAAAGGATTACGGGGAGTTTAGACCGGAGAGGTGGCTCGAGAATGGGGTCTGCCGGATGGAGAGCCCGTTCCGATTCCCGGTGTTTCACGCCGGCCCGAGGATGTGTCTGGGGAAGGACATGGCCTTTATTCAGATGAAGTCCATAGTTGCTGCTGTGATTGAGAGGTTTCATGTGGAAATGGTGGAGAAGGAGAAAGCTCCAAAGCAAATGCTTTCACTAACGTTGAGGATGGAGAATGGGCTGCAGGTGATGCCCAAAAAGAGAGACACAGTGGACCTACCTGGTTAA 1674 50.42 MQLLFYKFPSFLIWILVSLFANNSFEKKKKKKGKRKKKIVSFFSTGGAMDIWMAMLLIITLLFPLLFLRFFGSRNKEGFRNFPIFGTLPDFLANRHRFLDWSTEVLRKCRGNTAVFRRPGKVQGVITANPEVVEHILKTQFENYPKGDRFISLLEDFLGRGIFNCDGPNWRAQRKTASYEFNTKSLRNFVMENVAVEIGTRLVPVLERASETGRGLDLQDVLERFTFDNVCKLAFDFDPGCLSGDATAGADFMRAFEDAATHSSGRFLYAIPNSYKMKRFFNVGSEKTLRQSIATVHKFADNIIHSRIEETKKTTSHKKDQDLLSRFMGDENNYSPELLRDIVISFILAGRDTTSSALTWFFWILSSRPDIEQNILAELKTLRSKRTGDEETKVGLYTYDELRNMQYLQAALSETLRLYPPVAVDTKACGSDDVLPDGTAVKKSWFVTYHTYAMGRMESIWGKDYGEFRPERWLENGVCRMESPFRFPVFHAGPRMCLGKDMAFIQMKSIVAAVIERFHVEMVEKEKAPKQMLSLTLRMENGLQVMPKKRDTVDLPG 557
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 14078649 14081714 + MC05g1039 Mch5g1320 688739
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1320 557 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 490 499 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch5g1320 557 PRINTS P450 superfamily signature 349 366 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 PRINTS P450 superfamily signature 497 508 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 PRINTS P450 superfamily signature 488 497 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 PANTHER CYTOCHROME P450 62 543 - -
Mch5g1320 557 Gene3D Cytochrome P450 67 554 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 SUPERFAMILY Cytochrome P450 69 550 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 FunFam Cytochrome P450 71 553 - -
Mch5g1320 557 Pfam Cytochrome P450 78 534 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 PRINTS E-class P450 group I signature 409 427 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 PRINTS E-class P450 group I signature 497 520 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 PRINTS E-class P450 group I signature 358 384 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 PRINTS E-class P450 group I signature 338 355 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 PRINTS E-class P450 group I signature 487 497 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g1320 557 CDD CYP86A 113 543 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1320 Mch-Chr5:14078649 Mch6g2006 Mch-Chr6:22462114 4.07E-142 dispersed
Mch5g1318 Mch-Chr5:14059803 Mch5g1320 Mch-Chr5:14078649 9.16E-282 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1320 - - - 0.0