Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1349 GCCTGCTTGGATCCAGAGAAGTTTAAAGAGTTTAAGCTTGTTAAGCGTACGAAGCTGAGCCATAATGTGGCGAAGTTCACTTTTATACTTCCCCGTCCCAATTCAATTCTTGGTCTTCCTATTGGACAACATATAAGTTGCAGGGGAAAGGATAGCCAGGGTGAAGAGGTTATTAAACCTTACACGCCAACTACTTTGGACTCTGATGTTGGATATTTTGAACTAGTCATAAAGATGTATCCCCAAGGCAGGATGTCACATCATTTTCGAGAAATGCGTATCGGGGACCATCTTGCTGTGAAGGGACCAAAGGGACGTTTTAAGTATCAACCTGGTCAAGTTAGAGCATTTGGGATGCTTGCTGGAGGCTCTGGCATTACACCTATGTACCAAGTTGCTCGTGCTATATTAGAAAACCCGAAAGACGAGACTAAGGTTCACCTTATTTACGCCAATGTTACATACGAAGATATTCTTTTGAAGGAGGAATTGGATATTCTTGCCACTAGATACCCTGATCGCTTCAAGATCTACTATGTGTTGAACCAGCCTCCTGAAGTTTGGGATGGTGGTGTTGGCTTTGTGTCCAAGGAAATGATTCAAGCGCATTGCCCTGCACCTGCTCCTGGCATTCAGATTCTACGGTGCGGTCCGCCGCCGATGAACAAGGCCATGGCTGCCCACCTTGAGGCTCTTGGATATACGCCTGAAATGCAGTTTCAGTTCTAA 729 45.27 ACLDPEKFKEFKLVKRTKLSHNVAKFTFILPRPNSILGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRIGDHLAVKGPKGRFKYQPGQVRAFGMLAGGSGITPMYQVARAILENPKDETKVHLIYANVTYEDILLKEELDILATRYPDRFKIYYVLNQPPEVWDGGVGFVSKEMIQAHCPAPAPGIQILRCGPPPMNKAMAAHLEALGYTPEMQFQF 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14432891 14437100 + MC05g1063 Mch5g1349 688768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1349 242 FunFam NADH-cytochrome b5 reductase 100 242 - -
Mch5g1349 242 FunFam NADH-cytochrome b5 reductase 1 100 - -
Mch5g1349 242 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 98 238 IPR039261 -
Mch5g1349 242 SUPERFAMILY Riboflavin synthase domain-like 3 111 IPR017938 -
Mch5g1349 242 PRINTS Cytochrome B5 reductase signature 156 167 - -
Mch5g1349 242 PRINTS Cytochrome B5 reductase signature 95 109 - -
Mch5g1349 242 PRINTS Cytochrome B5 reductase signature 37 48 - -
Mch5g1349 242 PRINTS Cytochrome B5 reductase signature 212 220 - -
Mch5g1349 242 PRINTS Cytochrome B5 reductase signature 118 137 - -
Mch5g1349 242 PRINTS Cytochrome B5 reductase signature 59 66 - -
Mch5g1349 242 CDD cyt_b5_reduct_like 11 242 - -
Mch5g1349 242 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 6 110 IPR017927 GO:0016491(InterPro)
Mch5g1349 242 Pfam Oxidoreductase NAD-binding domain 119 225 IPR001433 GO:0016491(InterPro)
Mch5g1349 242 Gene3D - 100 242 IPR039261 -
Mch5g1349 242 Pfam Oxidoreductase FAD-binding domain 11 109 IPR008333 -
Mch5g1349 242 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 156 167 IPR001709 GO:0016491(InterPro)
Mch5g1349 242 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 118 137 IPR001709 GO:0016491(InterPro)
Mch5g1349 242 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 212 220 IPR001709 GO:0016491(InterPro)
Mch5g1349 242 Gene3D Translation factors 1 99 - -
Mch5g1349 242 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 242 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1349 Mch-Chr5:14432891 Mch8g3097 Mch-Chr8:33385640 2.61E-62 dispersed
Mch5g1349 Mch-Chr5:14432891 Mch4g1728 Mch-Chr4:20412627 2.49E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1349 K00326 - csv:101212931 453.751