Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g1415 | ATGGAAGCCATGGCAACCATCTTTGATCACAACACCACCTCTTTGATCCCTTCCTATCAATATTGGTCCTTCTGGTTCATCACTGCCCTCATCCTCCACATCTTCCTCAAAAAATATCTCCCAAAACCTCCCTCGTCTCCGGACCGCCCCGCCCTGCCCCCGAGCCCACCGGCCCTACCTCTCATCGGCCACCTTCACCTTCTCACCCCAGTCTTGGTCACCTCCTTCCAAACCCTAGCTCGCCGCCATGGCCCCCTCATCCACCTCCAACTCGGGGCATCGACATGCGTCGTCGCCTCCACCACTGCAGTCGTCAAAGAGATCCTCAAAACCCGCGAGCACAACTTCCTCTCCCGGCCGGAGTTCGGCGCCTCCGAGCACTTCATCTACCGTGGGTCGAGATTCGTCATGGCCCCATATGGCGCCTACTGGCGGTTCATGAAGAAGATGACCATGACAAGGCTCCTCTCACCGCCGCAGCTGGCCGTCTCAACTGCCATCCGCCGCGACGAGGTGATGAAACTAGTGGAGAGAATAGGGTTTAATTCAAGAGAAAAGAAGCACTCAGATTTGAGCTTGGAATTGACAACTTTGACAAACAACATCATATCAAGGATGGTTTTAAGCACAAGGTGCTCAAATGGGGAAGATGAGGCTCAAGAGATTAAGGATTTGGTGTGGAAGATCAATAGGCTGGCTGGGAAATTGAGTGTGGGGGACATTTTAGGACCTTTGAAAGTGTTTGATTTCTCAGGAAATGGGAAGAAGTTTGTGAAGACTTTGAAAAGGTTTGATGGGTTGGTCGAGAAGATAATGAAGGAACATGAAGAGAACATTAAGGACGCCATTAATGGAGGTGATGATGGGGAGAGAAGAAAGGATTTGTTGGATATCTTATTGGAGATTTACAGAGATCCAGGTGCTCAAATGAGACTGACCAGAAAAGATATCAAATCCTTCTTGCTTGATCTTTTCATGGCCGGCACCGACACGACGGCGACGGCGGTGCAATGGGCGATGGGAGAGCTCCTGAATCGTCCTGAAGCATTTCAAAAGCTAAGAAAAGAGATAATTTCGGTCGTCGGAGCAACCAGGGCAGTCCAAGAATCCGACCTCCCCAACCTCCCATATCTCTCCGCCGTCATCGCCGAAACTCTCCGCCTCCACCCGTCGGCGCCGATCATAATCCGACAATCTGCCGACGATTGCCACGTCAACGGCTCACTAATCAAGGCCAACACTCGAGTCCTGGTCAACGCATACGCCGTCATGCGGGACCCAGAGGCCTGGTCGGAGCCTGACAGCTTCCTGCCGGAGAGGTTTCTCGAAGGGTCGTCGGAGAGGATCGGCGACCACCGGATGGAGATGAAGGGGCAGAATTTTCGGTTCATTCCATTCGGGAGTGGGAAGAGAGGGTGCCCCGGCGCGTCCCTCGCTATGTTGGTCGCTCCCTGTGCTGTCGCCGCCTTGGTGCAACGGTTCGATTGGAAGATGAAAGATGGAGACGGCGGCGTTGATCTGAGGCTAGGGCCCGGATTTGCAGCGGAGATGGCGGCGCCGCTGGTTTGCTATGCGGAGGCCATTGATGGGAGTGGTGTTGTTGATTTTTCAACCATGGCTGATTTTTCATCCTACCTTCTTCTTCTTCTTCTCCTTTTCTGGTTATCCTACTTCCTCTTTCTCCGATCAATCTTCACCAGAACCCGGCCCAACAACCCCGGCCGGCATCCCCCGAGCCCGCGGTCGCTGCCGGTGATCGGCCACCTCCACCTCCTCGGCCGGATCCCTCACCAATCTCTCCACAAATTATCATGCCAATATGGACCATTAATGCACCTCTTCTTCGGCTCAAAGCCTTGCTTGGTGGTGTCCTCTCCTGAAATGGCTAAAGAGTTCCTCAAAAACCACGAATCCTCCTTTCTGAACCGTCCCATAAGGACCAACATAAACTATCTCACTTACGGCTCTGCGGACTTCACTTTTGCCCCCTATGGACCCTATTGGAAGTTCTTGAAAAAGCTTTGCATGACGGAGCTCCTCGGCGGCCGCACTCTCGACCTCCACCACCCCGTCAGAGAGGATGAGACGAGGCTGTTCCTGCAGCGGATTCGTACACGGGCTCTTGCTGGGGCGGCAATCGATGTTGGAGCTGAGCTTTCCAGGTTGATGAATAACATAATCTCAAGAACGACGTTAAGAAGAAGATGTCCGAAGGAAGACGATGGAGGGGAAGAAGTGGGCAAATTGGTGACGGAGATGTGCGAGCTCGCCGGAGAACTCAACGTGGCCGACATGATATGGTTGTGCAAGAAGTTAGATTTGCAGGGGTTTAGGAAACGAGTCAGAGATGTGAGGAAGAGGTATGATGAAATGATGGAGAAGATAATAAAGGAACATGAAGAAGAGAGGAAGAGGAAGAAGGAAGATGGAGTTAAGGATTTGCTTGATATTCTACTTGACATTTATGAAGATCAAAGCTCAGAAATCAAACTCACTAGAGATAATATCAAGGCTTTTGTTATGAACATATTCGGCGCCGGAACGGAAACATCGGCGGCGGCGACAGAATGGGCACTGGCGGAGCTGATCAACAATCCGTCCGCCATGGCCAAAGCAACCGAAGAAATCGACGCCAAAATCGGAAAAACCAGACCCCTCCAAGAATCCGATCTCCCCAATCTCCCTTATCTCCAAGCCGTCGTTAAAGAGACCCTCCGCCTCCACCCCACCGCGCCGCTCCTCGTCCGGGAGGCCACGGAGCCCTGCGCCGTCGCCGGCTTCCACGTGCCGGAGAGCACGCGCCTGCTCGTCAACGTCTGGGCCATCGGGCGGGACCCGGCCCACTGGGACGACCCGCTCCAGTTCCGCCCCGAGAGGTTTCTCGGCGAAAATGGGAGAGCCCACCACCAGCACAGATTTGATCTGATGCCGTTTGGGAGCGGGCGGCGGAGCTGCCCCGGCGCCGCGCTGGCTCTGCTGCTGGTCCCGGCGGTGCTTGGTGGGCTGATTCAGGGCTTTGAGTGGAAGGTTCATGGCGGCGGCAGCGGTTGTGCTATCGATATGGAAGAGGCCGCCGGAATCTCTCTCCGGCGAGCTCGTTCTTTGGTTTTGATCCCGGCGCCTAGGCGCTCCCTCCCTTCTTTTCCATATTGA | 3153 | 54.17 | MEAMATIFDHNTTSLIPSYQYWSFWFITALILHIFLKKYLPKPPSSPDRPALPPSPPALPLIGHLHLLTPVLVTSFQTLARRHGPLIHLQLGASTCVVASTTAVVKEILKTREHNFLSRPEFGASEHFIYRGSRFVMAPYGAYWRFMKKMTMTRLLSPPQLAVSTAIRRDEVMKLVERIGFNSREKKHSDLSLELTTLTNNIISRMVLSTRCSNGEDEAQEIKDLVWKINRLAGKLSVGDILGPLKVFDFSGNGKKFVKTLKRFDGLVEKIMKEHEENIKDAINGGDDGERRKDLLDILLEIYRDPGAQMRLTRKDIKSFLLDLFMAGTDTTATAVQWAMGELLNRPEAFQKLRKEIISVVGATRAVQESDLPNLPYLSAVIAETLRLHPSAPIIIRQSADDCHVNGSLIKANTRVLVNAYAVMRDPEAWSEPDSFLPERFLEGSSERIGDHRMEMKGQNFRFIPFGSGKRGCPGASLAMLVAPCAVAALVQRFDWKMKDGDGGVDLRLGPGFAAEMAAPLVCYAEAIDGSGVVDFSTMADFSSYLLLLLLLFWLSYFLFLRSIFTRTRPNNPGRHPPSPRSLPVIGHLHLLGRIPHQSLHKLSCQYGPLMHLFFGSKPCLVVSSPEMAKEFLKNHESSFLNRPIRTNINYLTYGSADFTFAPYGPYWKFLKKLCMTELLGGRTLDLHHPVREDETRLFLQRIRTRALAGAAIDVGAELSRLMNNIISRTTLRRRCPKEDDGGEEVGKLVTEMCELAGELNVADMIWLCKKLDLQGFRKRVRDVRKRYDEMMEKIIKEHEEERKRKKEDGVKDLLDILLDIYEDQSSEIKLTRDNIKAFVMNIFGAGTETSAAATEWALAELINNPSAMAKATEEIDAKIGKTRPLQESDLPNLPYLQAVVKETLRLHPTAPLLVREATEPCAVAGFHVPESTRLLVNVWAIGRDPAHWDDPLQFRPERFLGENGRAHHQHRFDLMPFGSGRRSCPGAALALLLVPAVLGGLIQGFEWKVHGGGSGCAIDMEEAAGISLRRARSLVLIPAPRRSLPSFPY | 1050 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 15234172 | 15253154 | - | MC05g1115 | Mch5g1415 | 688834 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g1415 | 1050 | FunFam | Cytochrome P450 family protein | 45 | 523 | - | - | |
| Mch5g1415 | 1050 | Coils | Coil | 774 | 809 | - | - | |
| Mch5g1415 | 1050 | PRINTS | P450 superfamily signature | 976 | 985 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | PRINTS | P450 superfamily signature | 899 | 910 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 466 | 475 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch5g1415 | 1050 | Gene3D | Cytochrome P450 | 47 | 526 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 978 | 987 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch5g1415 | 1050 | FunFam | Cytochrome P450 family protein | 568 | 1037 | - | - | |
| Mch5g1415 | 1050 | PRINTS | E-class P450 group I signature | 80 | 99 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | PRINTS | E-class P450 group I signature | 975 | 985 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | PRINTS | E-class P450 group I signature | 898 | 916 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | PRINTS | E-class P450 group I signature | 985 | 1008 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | PRINTS | E-class P450 group I signature | 198 | 216 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | PRINTS | E-class P450 group I signature | 938 | 962 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | PRINTS | E-class P450 group I signature | 104 | 125 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | Pfam | Cytochrome P450 | 53 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | Pfam | Cytochrome P450 | 577 | 1027 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 554 | 1042 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Mch5g1415 | 1050 | Gene3D | Cytochrome P450 | 563 | 1038 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | SUPERFAMILY | Cytochrome P450 | 577 | 1042 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1415 | 1050 | SUPERFAMILY | Cytochrome P450 | 49 | 524 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1289 | Mch-Chr2:9026838 | Mch5g1415 | Mch-Chr5:15234172 | 4.62E-161 | dispersed | |
| Mch5g1415 | Mch-Chr5:15234172 | Mch6g2308 | Mch-Chr6:25044407 | 3.18E-164 | dispersed | |
| Mch1g0365 | Mch-Chr1:7516572 | Mch5g1415 | Mch-Chr5:15234172 | 3.52E-193 | transposed | |
| Mch8g1025 | Mch-Chr8:7237681 | Mch5g1415 | Mch-Chr5:15234172 | 2.48E-128 | transposed | |
| Mch8g1964 | Mch-Chr8:21600893 | Mch5g1415 | Mch-Chr5:15234172 | 1.22E-57 | transposed | |
| Mch5g1415 | Mch-Chr5:15234172 | Mch9g0532 | Mch-Chr9:3921555 | 1.65E-131 | wgd |
Pathway information