Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1437 ATGATTTTCAACCCCGCGAGGCGGGCGGGAGTACGGACAAAATTCAAGAGAAAACCCAACCAAAATAAAAATGAAAAAAAAGCCGAACCGATTTTGGAGGGGAAAGAGAGTGAAAATTCCGCCATTTTTGAAGCACTGGAGCGAGAACTTCCCAAGTTCTACCCTACCAATTCTGGTTCCAACTTCCAAAGACTAAAATTTATCTGCAACCTAAAATTTCTCTTGTTCGTTCTCTTCTTCGCAATGGGAATCGACTCAGAGAAGAATTTCCAGCGCAAGCAGTGTTCCTATCAAATATCGGATGAGCAATACAATATTCAGAACGAGACGTACAGGGGCCAGCTATTTAGTCATATTTACTTTGCTCGACTCCACTTGATGAGAACGATTCTCTTATCACTCGTCTCTAAGTGGAAACCTCATTCACCAGTTTGTACTATAATAGAATTGGAGGAAGGCAAGGAATGCATCATCATAGGAACCGTCTACAAGCATATGAAACTTAAACCTACCATTCTGGATGAGTATTCAAAGGAGAGATCTGCCACCCCACTTGTTAAGCCTCATAACTTTATGCACCCAGATGATCAACTAGTTTTGGAAGATGAAGGTGGGAGAGTCAAGCTTTCTGGGGCCGTGCTACCTTCTGTATATGTTACAGGGATTGTTGTTGCATTGCATGGAAAGGAAACTTGCGTCGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGCTTGCCACCGCAGATAGAGCAGCCACTCATATCAAGAGAAGATAAGTACGTGGTTTTTGTGTCAGGCCTAAGTATTGGGAGCAGCATCTCTAATCCTCTTCAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAAGGGATTGCAGCTCAAATAGTTCATGTTGTCATCTGTGGGAATTCTGTTGAAATTCCTTCTGCAGTTTTAAATGGTCAGCATTTATCTACGAAGGACCAAACGAAGCTGATAGAACCTCTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGCGTACCTGTTGACATCATGCCAGGTTCCAGTGACCCAGCCACCTTTTCCTTGCCCCAGCAGCCTTTACACAATTGCCTTTTTCCTGGATCGTCAGCTTACAACACTCTTAGGGCTTGCTCTAACCCTCATTGCTTTGAGCTCGATAATTTCAGTCCCCCACACTTCAATCGACGGTTTTTTTGTTTTAGGTTTCTTGGAACATCGGGTCAGAACATAGATGATCTTGAGAAGTACTCAGAGGCTAAAGATAAGCTTGAATTTATGGAGAGGACACTGAGATGGAGGCATCTGGCACCAACTGCTCCAAATACTCTTGGGTGTTATCCTTTCACTGACCGAGATCCTTTCCTGATTGAGAGCTGTCCTCATGTTTATTTTGTTGGCAATCAGGACAAGTTCGATACTCGCTTAATAAAGGGACCTGAAGGGCAGATGGTAAGACTCATTTCGATTCCAAGATTTTGTGAGAAGGGAACTGCCGTAATGCTTAACTTGAGAAATCTTGAATGCCACACCCTGAGTTTTGGGACTGAATTCAGCTGA 1593 43.25 MIFNPARRAGVRTKFKRKPNQNKNEKKAEPILEGKESENSAIFEALERELPKFYPTNSGSNFQRLKFICNLKFLLFVLFFAMGIDSEKNFQRKQCSYQISDEQYNIQNETYRGQLFSHIYFARLHLMRTILLSLVSKWKPHSPVCTIIELEEGKECIIIGTVYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDQLVLEDEGGRVKLSGAVLPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIEQPLISREDKYVVFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPSAVLNGQHLSTKDQTKLIEPLKELDILLNQLAAGVPVDIMPGSSDPATFSLPQQPLHNCLFPGSSAYNTLRACSNPHCFELDNFSPPHFNRRFFCFRFLGTSGQNIDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFVGNQDKFDTRLIKGPEGQMVRLISIPRFCEKGTAVMLNLRNLECHTLSFGTEFS 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15467998 15478060 + MC05g1133 Mch5g1437 688856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1437 530 CDD MPP_PolD2_C 261 525 IPR041863 -
Mch5g1437 530 Gene3D - 250 529 - -
Mch5g1437 530 Pfam DNA polymerase alpha/epsilon subunit B 262 485 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Mch5g1437 530 Gene3D - 121 244 - -
Mch5g1437 530 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 86 523 IPR024826 GO:0006271(PANTHER)|GO:0042575(PANTHER)|GO:0043625(PANTHER)
Mch5g1437 530 MobiDBLite consensus disorder prediction 1 32 - -
Mch5g1437 530 FunFam DNA polymerase delta subunit 2 121 244 - -
Mch5g1437 530 Pfam DNA polymerase delta subunit OB-fold domain 116 241 IPR040663 -
Mch5g1437 530 FunFam DNA polymerase delta small subunit 249 530 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1437 K02328 - csv:101221438 784.637