Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1455 ATGTATGTGTCCACCAAGGCTCTGCTTGGGGCCGCCATTATCTGTGCAACTCTGGTGGCTGAAGGCTGCGGCTACTTCTTGGACTTCCCCCTCTCCACCACCACCGCCGAGCAGCTCTCGAATCTCATTTGGAGCTACGATGACACCGTCTTTCAAGGCGAAGACCACCGCCCAGCGCCGCCTAATACTACTCAAGAACCCCCCCTCACAAATGCTTCTATCCGGGTCGTTTACAACCAGCCATTCAAGCTCAAAAACAGACGAGAAATCGCGGCTTTCACAACCGATTTTGTGCTTAACTTCGGCTCCTCGACCAACTCCTCCGCCGCCCACGATGGCATCGCCTTTATTCTTGCGGCAGATCCCTCCCCTCCTTCCAGCAGCGAGGGCCAGTGGCTGGGGATTACCAATTCGACCACCGACGGGACAGTGGAAGCTGGGATTTTTGCAATTGAATTCGATTCGAGGAAGAGTTTTCCCGAGGATGTGGACGGGAACCATGTGGGGTTGGATTTGAACAGTGTTTACTCTGTTTTCCAGATGCCATTGTCGGAATTTGGGGTTAATCTTTCTGCTACGGATGATATTTATGTTAGAGCCGAATTTGATGGTAAGAACATTTCTATTTATGTCTCTTTGTCGGCCAGATTGGAAGATCGGTTGAAAAACCGCGTCATTTTTCATCCCCTGAATCTCTCTGTTCTCCCCGACGAGGTTTACCTCGGCTTCTCTGCTTCAAAATTCGAGTACAACGCTCAATTGAACTGGGGGGTAAAATCGTGGCAGTTTTCCGGCACAGATATCGGTGACAAACGCCGGTGGGTTTGGGTCTTCCTCGGCGCCGGTGGACTCGTTCTCTTATCTGGGGTCGCCCTTTTGATCCTGTGGATCATGAGAAAACGAAAATTGAACGATCTGGAAGAAGGATACCCAGGGATAGAAGACCAGCTTCAAGATTTCTCCATAGCACCACGAGTTCAGAAGTTCGAGTTTTCAGAGCTGAAGAAGGCAACTGGCAATTTCGACGCCAAGAACAGGCTCGGGAGAGGCGGATTTGGAACGGTTTACAGAGGAGATTTGATGAACAGAGAGGTGGCCGTGAAGAGAATCTCAGAGAATTCCCATCAAGGGAAGCAAGAATTCATTGCCGAAGTGGCAACAATCGGTGGCCTCCATCACAAGAACCTCGTCAAACTAATGGGATGGTGCTACAAGAAGAGAGATCTTTTGCTGATATACGAATACATGCCCAACGGCAGCTTGGACAAGCTGATTTTCGGTGGCGATGACAACTCCTCCGCCACACCCAATTGGGAAACCAGACGGAATATAATCTGCGGAGTAGCGGAGGCTCTCGATTATCTTCACAACGGGTGTGAGAAGAGAGTGATCCACAGAGACGTGAAGCCTTCAAACATAATGTTGGATTCGAAGTTGGAAGCTAAGTTGGGAGACTTCGGGTTGGCTCGGGCAATTCATCGAACAGAACAGACGCATCACTCAACAAGAGGAATAGCTGGTACATACGGCTACATGGCACCAGAAATTTTCCTAACCCGCAGAGCAACAGCGGAGACAGACGTATACGCATTTGGGATTCTTGTTTTGGAAGTCGTGTGCGGGAGAAAGCGTACAAGTAAAAATCCATCGAACCTGAGTGTATACGAAGGCCATATTACAAATTGGGTATGGGAGTTTCAGGAGAGAGGAGAGATCCGAGGAGCTGCCGATGGGAGAATTGGAGGGCAATGTGAGGAAGAAGAGATGGAGAGAACTTTGATTGTAGGATTGGCTTGTTGCCATCCGAACCCCCATGAGAGACCAACCATGAAAAACGTTTTGCAAGTGCTCAAAGGGGAAGCAGATCCGCCGACTTTGCCCCATGAAATGCCTTTGTTTGTGTGGCCGCTGCCGCTCGTGCCTCCGTCGTCGAGAGACAACACAGATAGCTCTCCGAGAGAGACCCAACTTTCCGATCCATCAACATCAACAATGACAGAGCTTGTTGGGAGATAG 2016 49.9 MYVSTKALLGAAIICATLVAEGCGYFLDFPLSTTTAEQLSNLIWSYDDTVFQGEDHRPAPPNTTQEPPLTNASIRVVYNQPFKLKNRREIAAFTTDFVLNFGSSTNSSAAHDGIAFILAADPSPPSSSEGQWLGITNSTTDGTVEAGIFAIEFDSRKSFPEDVDGNHVGLDLNSVYSVFQMPLSEFGVNLSATDDIYVRAEFDGKNISIYVSLSARLEDRLKNRVIFHPLNLSVLPDEVYLGFSASKFEYNAQLNWGVKSWQFSGTDIGDKRRWVWVFLGAGGLVLLSGVALLILWIMRKRKLNDLEEGYPGIEDQLQDFSIAPRVQKFEFSELKKATGNFDAKNRLGRGGFGTVYRGDLMNREVAVKRISENSHQGKQEFIAEVATIGGLHHKNLVKLMGWCYKKRDLLLIYEYMPNGSLDKLIFGGDDNSSATPNWETRRNIICGVAEALDYLHNGCEKRVIHRDVKPSNIMLDSKLEAKLGDFGLARAIHRTEQTHHSTRGIAGTYGYMAPEIFLTRRATAETDVYAFGILVLEVVCGRKRTSKNPSNLSVYEGHITNWVWEFQERGEIRGAADGRIGGQCEEEEMERTLIVGLACCHPNPHERPTMKNVLQVLKGEADPPTLPHEMPLFVWPLPLVPPSSRDNTDSSPRETQLSDPSTSTMTELVGR 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15635036 15637801 + MC05g_new0306 Mch5g1455 688874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1455 671 ProSitePatterns Protein kinases ATP-binding region signature. 347 368 IPR017441 GO:0005524(InterPro)
Mch5g1455 671 CDD lectin_legume_LecRK_Arcelin_ConA 69 266 IPR001220 GO:0030246(InterPro)
Mch5g1455 671 CDD STKc_IRAK 347 619 - -
Mch5g1455 671 Gene3D Phosphorylase Kinase; domain 1 314 415 - -
Mch5g1455 671 Gene3D - 27 266 - -
Mch5g1455 671 ProSiteProfiles Protein kinase domain profile. 341 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g1455 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 63 264 IPR013320 -
Mch5g1455 671 SUPERFAMILY Protein kinase-like (PK-like) 326 650 IPR011009 -
Mch5g1455 671 PANTHER - 68 627 IPR050528 GO:0005886(PANTHER)
Mch5g1455 671 SMART serkin_6 341 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g1455 671 FunFam Lectin-domain containing receptor kinase A4.3 416 636 - -
Mch5g1455 671 MobiDBLite consensus disorder prediction 643 671 - -
Mch5g1455 671 Pfam Legume lectin domain 73 270 IPR001220 GO:0030246(InterPro)
Mch5g1455 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch5g1455 671 Gene3D Transferase(Phosphotransferase) domain 1 416 623 - -
Mch5g1455 671 Pfam Protein kinase domain 343 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g1455 671 FunFam serine/threonine-protein kinase PBS1-like 313 415 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1455 Mch-Chr5:15635036 Mch6g0120 Mch-Chr6:691627 4.67E-106 dispersed
Mch5g1454 Mch-Chr5:15618245 Mch5g1455 Mch-Chr5:15635036 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77421 PF00069 Pkinase 4.40E-50 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1455 - - - 0.0