Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g1628 | ATGGAACTACACTTCCTCCTCCTCCTCGTCTTCTCTCTCCTCTTTCTCTCTCTAGCCCTCCTTCTGTTCAAACCCAGACTCCTGTGCGACTGCGAAATCTGCCGCGCCTACATGACGTCATCCTGGTCGGAAAATTACCTCAACCTCTGCGACTGGTACTCCGATCTCCTCCGCCGGTCTCCGACCAAGACCATCCACATCCACGTCCTCGGCAACACCGTCACCGCCAATCCCGACAACGTCGAGTACATTCTCAACACCAATTTCGACAACTTCCCCAAGGGCAAAAACTTCTCCGCCATTCTCGCCGATTTTCTCGGCCGCGGAATCTTCAATGTCGACGGCGATCTGTGGCGCTTCCAGAAGAAAATGGCCCTTCTCGAGCTCGCCCACCACTCCGTTAGATCCTACGGCTTCGAGATCGTTTGCCACGAGATTCGGAGCCGCCTCGTCCCGCTTCTCCAATCGGTCGCCGGAAAGGGCGACGGCGGGGGCTTGGATTTGCAAGACGTGTTTAGGAGATTTGCTTTTGATTGTATTTGTAAATTTTCGTTTGGGTTGGATCCTATGTGCTTGGAGCTGTCTCTTCCGATGTCGGATTTTGCTGTCGCTTTTGATGCTGCTTCCAAGCTTTCCGCTGAGAGAGCCATGGCGGTCCCGCCGGTCTTGTGGAAAATCAAGCGGATTCTCAACTTAGGGAGCGAGAGGGAATTAAAGCAATCAATGAAGTTGATCAACATGTTGGCCGGAGAAGTGATCCGGCAGAGAAGAAAAATGGGATTTTCGACCCACAGAGATCTGCTCTCTCAGTTCATGAGAACAGTTTCCGACGAAACTTTCTTACGGGACATCGTCGTCAGCTTCCTTTTGGCCGGACGCGACACGGTGGCGTCGGCGCTCACCAGCTTCTTCTGGGTCCTCTCCGCCCACCCCGCCGCCGAGTCCAAAATCCAACTCGAGGCCGATCGGGTCGTCGGAGCCGGCTCCGACCCGACGACATTCGACCAAATCCGGAATCTCCACTACTTACACGCCGCAATCTACGAGTCCATGAGGCTCTTCCCTCCGATTCAATTCGACTCCAAGTTCTGCCGGAACGACGACGTTTTGCCCGACGGGACAATCGTCCGCCGTGGCACCCGGGTCACCTACCACCCGTACGCCATGGGTCGGGTCGAGGACATTTGGGGCCCCAACTGCCTCGAGTTCGACCCGGAACGGTGGCTCCGAAATGGTGTTTTCTGCCCGGAAAACCCGTTCAAGTACCCGGTTTTCCAAGGCGGGTGCCGATTCTGTTTGGGAAAAGAAATGGCCCTTGTGGAGTTGAAAGCCGTTGCGGTTTCGCTTATCCGACGGTTCCGAATCCGATCGGCGACGCCGTGTGTGGCGCCGCGGTTCTCGCCGGGCCTAACCGCCACCTTCTGCGGCGGATTGTGGGTTTCGGTCAGAGAGAAGGAGAAATCGAGCTGA | 1470 | 56.05 | MELHFLLLLVFSLLFLSLALLLFKPRLLCDCEICRAYMTSSWSENYLNLCDWYSDLLRRSPTKTIHIHVLGNTVTANPDNVEYILNTNFDNFPKGKNFSAILADFLGRGIFNVDGDLWRFQKKMALLELAHHSVRSYGFEIVCHEIRSRLVPLLQSVAGKGDGGGLDLQDVFRRFAFDCICKFSFGLDPMCLELSLPMSDFAVAFDAASKLSAERAMAVPPVLWKIKRILNLGSERELKQSMKLINMLAGEVIRQRRKMGFSTHRDLLSQFMRTVSDETFLRDIVVSFLLAGRDTVASALTSFFWVLSAHPAAESKIQLEADRVVGAGSDPTTFDQIRNLHYLHAAIYESMRLFPPIQFDSKFCRNDDVLPDGTIVRRGTRVTYHPYAMGRVEDIWGPNCLEFDPERWLRNGVFCPENPFKYPVFQGGCRFCLGKEMALVELKAVAVSLIRRFRIRSATPCVAPRFSPGLTATFCGGLWVSVREKEKSS | 489 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 17132359 | 17134917 | + | MC05g1296 | Mch5g1628 | 689047 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g1628 | 489 | Pfam | Cytochrome P450 | 73 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1628 | 489 | SUPERFAMILY | Cytochrome P450 | 48 | 484 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1628 | 489 | CDD | CYP86A | 67 | 478 | - | - | |
| Mch5g1628 | 489 | PRINTS | P450 superfamily signature | 345 | 356 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1628 | 489 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1628 | 489 | PRINTS | P450 superfamily signature | 432 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1628 | 489 | PRINTS | P450 superfamily signature | 291 | 308 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1628 | 489 | PRINTS | E-class P450 group I signature | 300 | 326 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1628 | 489 | PRINTS | E-class P450 group I signature | 422 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1628 | 489 | PRINTS | E-class P450 group I signature | 280 | 297 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1628 | 489 | PRINTS | E-class P450 group I signature | 432 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1628 | 489 | Gene3D | Cytochrome P450 | 39 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1628 | 489 | PANTHER | CYTOCHROME P450 | 30 | 458 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch5g1628 | Mch-Chr5:17132359 | Mch6g0068 | Mch-Chr6:397319 | 5.00E-127 | dispersed | |
| Mch3g0655 | Mch-Chr3:10976120 | Mch5g1628 | Mch-Chr5:17132359 | 4.51E-224 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch5g1628 | K20624 | - | csv:101207686 | 773.467 |