Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g1630 | ATTTATAGCTATGGAAGGAGCCTCAATGGATTTGCTGCAAGGCTGTTGCCCCATGAAGCTAATAAACTAGCAAAGGAAAAGGGTGTGGTATCGGTTTTTGCGAGCAGGAGGAGGAAGCTGCACACGACAAGATCATGGGATTTCCTGGGAGTGTCGGAAACGGCGAGCCGCCGTAACGCCGCCGCAGAGTCCGGCATAATCGTCGGATTACTGGACTCCGGGATATGGATGGAGGCTCCGAGTTTTAAGGACGACGGCTACGGCTCAATCCCTTCCAAATGGAAAGGCCAATGCGTCACTGGCCCCAATTTCACCTCCTGCAACAGAAAAGTTATCGGCGCAAAGTTTTTCAATCTGGATGGGCTCGGCGACAGCGACAGCCAAAGTCCGGTCGACGAGGAGGGCCACGGCTCCCACACGGCCTCCACCATCGCCGGAGCATACGTCTCCGGCGCCAGCCTCTACGGCGTCGCCGCCGGGACTGCCCGCGGAGGCGTCCCGTCGGGGCGGATCGCGATGTACAAGGTATGCTGGACGTACGGGTGCGGCGACATGGACATCTTGGCCGGGTTCGACCACGCGATCGCCGACGGCGTGGACGTGATATCGGTGTCCCTCGGTGGCGCGGCGGCGGAGTTCTTCGAGGATCCGGTGGCGATCGGGGCGTTCCACGCGATGGAGAAGGGGATACTGACGGCGTGCTCCGCCGGGAACGACGGGCCGGAGACGATGACGGTGGAGAACGCGGCGCCGTGGATTATGACTGTCGGCGCTTCTTCCATTGACAGAGGATTTAGTACCATCGTTAAATTGGGGAATAACAACAAATTATCTGGGATAACAATAGACACATTTTCACCGAAGAAGAAGATGTACCCTCTTATTAGTGGAACAATGGCAGCTACACCCGACACTGATCTAGATGCAAGCGAGTGCGATTACGGGTCTCTAGACAGAGAAAAGGTGAAGGGGAAGATAGTGTATTGTTTAGGACCTTACTCCCAAGAGTCTACTATCGAAGACTTGGAAGGTGCGGGGATGATCGGGAATCTTCTCGGAACCACCGATGTCGCGATGGCCACTCCCATTCCCTCCTCCTACCTCTCCATGGAAGATGGAGGCAAGGTTGAGACATACATGAACTCCACAAAGAACCCTCAAGCTGTGATCTATAAGACAACTACTTACAAAATGGATGCTCCTTTCTTGGCCTCTTTTTCTTCTAGAGGACCCCAGACTCTAGCTCCTAATATCCTCAAGCCGGACGTTACAGCGCCGGGACTGAACATATTAGCGGCGTTCTCGAAAATGGCTTCAATTCCGGACAACCGCCACTCCGTTTTCAACATTCTTTCAGGAACCTCCATGTCCTGCCCTCACGCCGCCGCCGCCGCCGCCTACCTCAAGACCTTCCACCCCAAATGGTCCCCCGCCGCCCTCAAGTCCGCCCTCATGACCACCGCGACGCCGGTGAAAACAGGGGACGAGTTCGACGAACTCGGAATCGGCGCCGGCCAGATAAATCCGGCGAAAGCCATCCACCCGGGCCTCATCTACGACATCTCTGTAACCAATTACGTCAGCTTCCTCTGCTCCACAAGGCGGTACGACGGCACCGCCCTGGCCCTGCTCGTCGGCGATGCCTCCTTCAACTGCTCCGGCGTCCCTCCGGCGACCGGCTCCGACGCCCTCAACTACCCCACCATGTACGCGCCGCTGGACGCCGACGCGACCTCCGTCGCAGCCGTGTTCCACCGGACGGTGACCCACGTCGGTTTCGGGCCGTCGACGTACAGGGCGAAGGTGAAGTCGCCGGCGGGGGTGGCGGTGAGAGTGGTGCCGGAGGTTCTGAAGTTCGATCGGCCGTACGAGAAGCGGTCGTTTAAGGTGGCGGTGAGAGGTCCGGTGGCGGCGGAGAGCAGGCTTCTGGCGGCGTCGCTCGAGTGGAACGATTCTAAGCATAATGTTAGAACCCAGATTGTGATGTTT | 1989 | 57.82 | IYSYGRSLNGFAARLLPHEANKLAKEKGVVSVFASRRRKLHTTRSWDFLGVSETASRRNAAAESGIIVGLLDSGIWMEAPSFKDDGYGSIPSKWKGQCVTGPNFTSCNRKVIGAKFFNLDGLGDSDSQSPVDEEGHGSHTASTIAGAYVSGASLYGVAAGTARGGVPSGRIAMYKVCWTYGCGDMDILAGFDHAIADGVDVISVSLGGAAAEFFEDPVAIGAFHAMEKGILTACSAGNDGPETMTVENAAPWIMTVGASSIDRGFSTIVKLGNNNKLSGITIDTFSPKKKMYPLISGTMAATPDTDLDASECDYGSLDREKVKGKIVYCLGPYSQESTIEDLEGAGMIGNLLGTTDVAMATPIPSSYLSMEDGGKVETYMNSTKNPQAVIYKTTTYKMDAPFLASFSSRGPQTLAPNILKPDVTAPGLNILAAFSKMASIPDNRHSVFNILSGTSMSCPHAAAAAAYLKTFHPKWSPAALKSALMTTATPVKTGDEFDELGIGAGQINPAKAIHPGLIYDISVTNYVSFLCSTRRYDGTALALLVGDASFNCSGVPPATGSDALNYPTMYAPLDADATSVAAVFHRTVTHVGFGPSTYRAKVKSPAGVAVRVVPEVLKFDRPYEKRSFKVAVRGPVAAESRLLAASLEWNDSKHNVRTQIVMF | 663 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 17146794 | 17152956 | + | MC05g1298 | Mch5g1630 | 689049 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g1630 | 663 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 1 | 41 | IPR037045 | - | |
| Mch5g1630 | 663 | Gene3D | Peptidase S8/S53 domain | 65 | 526 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Mch5g1630 | 663 | SUPERFAMILY | Subtilisin-like | 40 | 517 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Mch5g1630 | 663 | Pfam | Peptidase inhibitor I9 | 1 | 41 | IPR010259 | - | |
| Mch5g1630 | 663 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 45 | 513 | - | - | |
| Mch5g1630 | 663 | Pfam | Subtilase family | 64 | 503 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
| Mch5g1630 | 663 | CDD | Peptidases_S8_3 | 39 | 489 | IPR034197 | - | |
| Mch5g1630 | 663 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 453 | 463 | IPR023828 | - | |
| Mch5g1630 | 663 | Gene3D | - | 262 | 396 | - | - | |
| Mch5g1630 | 663 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 1 | 659 | IPR045051 | - | |
| Mch5g1630 | 663 | Pfam | Fibronectin type-III domain | 564 | 661 | IPR041469 | - | |
| Mch5g1630 | 663 | CDD | PA_subtilisin_like | 269 | 390 | - | - | |
| Mch5g1630 | 663 | Gene3D | - | 530 | 663 | - | - | |
| Mch5g1630 | 663 | PRINTS | Subtilisin serine protease family (S8) signature | 452 | 468 | IPR015500 | - | |
| Mch5g1630 | 663 | PRINTS | Subtilisin serine protease family (S8) signature | 63 | 82 | IPR015500 | - | |
| Mch5g1630 | 663 | PRINTS | Subtilisin serine protease family (S8) signature | 132 | 145 | IPR015500 | - | |
| Mch5g1630 | 663 | FunFam | Subtilisin-like protease SBT1.5 | 65 | 275 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch5g1630 | Mch-Chr5:17146794 | Mch9g1268 | Mch-Chr9:14565197 | 6.41E-204 | dispersed | |
| Mch1g0911 | Mch-Chr1:12431655 | Mch5g1630 | Mch-Chr5:17146794 | 2.12E-264 | wgd |
Pathway information