Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1650 ATGGAGGATCAATATGGGCTCTCCGATCTCCGCCACCTCATGACCGCCCCCCCAGCTCGCTCCCATTTCCCCGGCCACCATGACCTCTCCGCCGCCGCCGCAGCCTACCGGAATCTTCACCCCAACTCCAACCCCTACGACCTCATCATGATGATGCCACGTGACCCTCTCCCCGACTTCCGCTCTGATCATTCCGCCTCCGCCACCGCCGCCGGGTTCGAAGGGGAAACCGGGTGCCTCGCCGGAGACAGCGGCACCGGGAGATGGCCGCGCCAGGAAACTCTTACGCTTTTGGAGATCAGATCTCGCCTTGATTCTAAGTTCAAAGAGGCCAATCAAAAAGGCCCCCTTTGGGATGAAGTTTCTAGGATCATGGCTGAGGAACACAATTATCAAAGAAGTGGGAAAAAATGCAGAGAAAAATTCGAGAACTTGTATAAATATTACAAAAAGACCAAGGAAGGGAAAGCTGGAAGACAAGACGGTAAGAACTACAGATTCTTCCGGCAGCTGGAAGCTCTCTATGGCGAAACCAGCAATGCCACTTCACTTCCAGACTCCCATTTCCTCGGAGACAACAACCTCAGATTCCAGCAAAATGGGACGACCAACAACCCGATCGCCACCGCTCCGATGAGCCACGAGGCTCCTCACAGCCTCAGCCTCTCGAACACGTCGGAGTTCGAAACCTCGGCCTCGTCCGATGAACTTGGCTCCATCGGCGTAATGGACAACGATTCTGTGGAGAAGCGGAGGAAGCGACGAGGCGGGAAATGTTGGAAGGCGAAGATCAAGCAATTCATCGACTCGCAAATGAGGAAGCTGATTGACAAGCAAGAGGCTTGGTTGGAGAAGCTCATGAAAACTCTTGAACAAAAGGAGAAAGAGAGAATGATTCGGGAGGAGGAATGGAGGAGACAAGAAGTATCTCGAATCGATCGCGAGAGGAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAAGCTAGAGATGCAGCATTAATGGAGGCATTACAAAAGCTAACAGGACGAGAAATAGGAGAGTACGACAACAACTCCTCGCCCGACCACCGATTAATGGCAGTCGAGCACCGTCAAAATAACAGCGAGAACCAAAACGAAGACGGGAGCGAAATACTAAACAACAGCACAGCTAGAGAATTACAAGACAACAATTACCAGAGAAAAATAATAGATCAAGGCAACAAGAAACGAAAGGAGACTTCAAGATCAGCCACCACCACCACAACCTACAACCTTTACTTCCAAAATGACTCCTCCCTCTACGGCGGCGGAGGCGGCAGCGGTGCCTACGGCAGTGAAATGAAAGAGCAAAGTCCGAATAGTTCCAACGCGGGCGGTGGCGGCAGCGGCGGCGGCCATGTGGTGCAAGATAGCTGCTTTCGTTTCTTGATGGGGGAGGGAGATCAATCTCAGTCTGGCTTGTGGGAAAATTTTGGGCTCAAACTCAACAATGGA 1476 51.96 MEDQYGLSDLRHLMTAPPARSHFPGHHDLSAAAAAYRNLHPNSNPYDLIMMMPRDPLPDFRSDHSASATAAGFEGETGCLAGDSGTGRWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALYGETSNATSLPDSHFLGDNNLRFQQNGTTNNPIATAPMSHEAPHSLSLSNTSEFETSASSDELGSIGVMDNDSVEKRRKRRGGKCWKAKIKQFIDSQMRKLIDKQEAWLEKLMKTLEQKEKERMIREEEWRRQEVSRIDRERSFWAKERAWIEARDAALMEALQKLTGREIGEYDNNSSPDHRLMAVEHRQNNSENQNEDGSEILNNSTARELQDNNYQRKIIDQGNKKRKETSRSATTTTTYNLYFQNDSSLYGGGGGSGAYGSEMKEQSPNSSNAGGGGSGGGHVVQDSCFRFLMGEGDQSQSGLWENFGLKLNNG 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17342475 17345130 + MC05g1309 Mch5g1650 689069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1650 492 PANTHER FI21293P1 67 398 - -
Mch5g1650 492 MobiDBLite consensus disorder prediction 382 411 - -
Mch5g1650 492 Coils Coil 276 303 - -
Mch5g1650 492 CDD GT1 88 153 - -
Mch5g1650 492 FunFam trihelix transcription factor PTL-like 89 151 - -
Mch5g1650 492 Pfam Myb/SANT-like DNA-binding domain 88 174 IPR044822 -
Mch5g1650 492 Gene3D - 89 151 - -
Mch5g1650 492 MobiDBLite consensus disorder prediction 435 459 - -
Mch5g1650 492 ProSiteProfiles Myb-like domain profile. 87 146 IPR001005 -
Mch5g1650 492 MobiDBLite consensus disorder prediction 440 454 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1650 Mch-Chr5:17342475 Mch9g1840 Mch-Chr9:20215548 1.83E-61 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43438 PF13837 Myb_DNA-bind_4 2.10E-19 CL0123 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1650 - - - 0.0