Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1658 ATGCCCGGCAGGAGGTTGAACTATACGCTTCTCAGTCAAGTTCCAGACGACCAATTCAGTGGCGGCGTTTCCGTGGCTGGAGCCGGAACTTCAACATATTTTATAGAATCTTCATCTGGAGAGGGGAAGAACGACAAGAGGAAGTTGGAAAAAGGATTGGATTGGGAAGCTGGTGGTGATCACAGGGCGAGCCAGCAGCAGGTTAATTGGATCGGTAATATGTACTCAGCCTTTGGTTTGCAGAGGCAGTCGAGTGGAAGCAGCTTTGGCGAGAGCTCGATATCAGGGGAGTACTATGCACCGACACCATCGACAACGGTGGCTAATGAGACGGATGCCTTTGGTTGTACGCACGATGATGTGCTTAGGATCGGAGGTGATTCGAGAGCACAGGCAGCTGAGATGGCTGCGGGGATTGGAGGATCTTCTAGTAAGAGTTGGGCGCAACAGACGGAGGAGAGTTATCAACTGCAGTTGGCATTGGCGCTACGGCTTTCATCAGAGGCAACTTGTGCTGATGATCCTAATTTTTTAAATCCATATCAGGATGATTCGGCTTTAAGGAGGTCGATAAGCTCTGCCAAGGCTGTGTCACATCGATTTTGGGTGAATGGCTGTCTATCATACTTTGACAAAATTCCTGACGGGTTTTATCTAATCCACGGAATGGATCCATATGTATGGACTGTGTGCACCAGCCTGCTTGATAATGATCGTATGCCATCAATTGAGTCTCTAAAGTCTGTTGATCCTAGCTTGGATTCTTCAATTGAAGTTGTTCTGATTGATCGGTGCACTGATCCCAACTTAAAAGACCTCCAAAATTGGGTCCAAAGCATATCTAGCAGCTCTATAACCACAAAAGAGGTTGTAGATGAGCTCGCAAAACTTGTCTGCAGGAGTTTGGGTGGCTCAGTTTCTGGAGAAGATGTTTTGGTGTCCATCTGGAGGGAGTGCAGTGATAACTTGAAGGAGTCCCTAGGCTCAGTGGTTGTTCCTCTTGGTGGCCTCTCTGTAGGACTCTGCCGGCATCGTGCTCTTCTTTTCAAAGTGTTAGCTGACACAATTGATTTACCCTGTCGAGTAGCCAAGGGCTGTAAATATTGCTTGTGCCACGATGCTTCCTCTTGTCTTGTTCAGTTTGGGCTTGACAAGGAGTATCTGGTTGACTTGATTGGGAATCCTGGTTGCTTATACGAGCCTGATTCTTTACTCAATGGTCCATCCTCCATCTTGATCTCCTCGCCATTGCGATTTCCACGACCTAAGCCAGTTGAGCCTGCCGTTGATTTCAGGTCACTGGCCAAACAGTACTTTTCAGATTGCCAGTTGCTTAATATTGTTTTTGATGAAGCTTCCTCAGTTACAATGACAGAAATTACCGTGGATGGAGAAGATGGGGCACTCCCCTATCTAAAGCAGTCTGACAGAAAGTTCACAAACAGAAACAACCCAATGATTATCACTGGTGATAGTGATGAAAAATCCCCTTTAATGCATGCAAAAACTTCTCAGCCTAACTCCCAAGACAGAGATTTCCATAACATTATACAATCAACTGCCCTGGTTGGGGATCCAATCCCACTAAATTATGCTCCTCATAATATCCGTAGAAGTGTTCAGTCGCTTTTGGACATGCCCCAGCCAAGAATGGATTCTACTGCACAGGGAGGTCAGCTAATACCAAGCAGTCGGAGTAAAGCAGTTCCCCTTGGTGCGGAGGATTTGGACATTCCATGGAATGATCTTGTTCTAAAAGAGCGAATTGGAGCAGGTTCTTTTGGAACTGTACATCGTGCTGATTGGAATGGATCGGAAGTGGCCGTGAAGATCCTCACAGAACAAGACTTCCATCCTGAACGCGTTAACGAGTTTCTGAGAGAGGTCGCTATCATGAAATCCTTACGACATCCTAATATTGTATTGTTTATGGGTGCGGTGACTAAGCCACCAAACTTGTCCATTGTTACTGAATATCTATCGAGAGGTAGCTTGTATAGGCTTTTGCACAAGTCAGGTGCCAAAGACATAGATGAAACACGTCGGTTAAGCATGGCTTATGATGTAGCAAAGGGAATGAACTATCTCCATAGACGTGATCCACCAATTGTTCATCGTGATCTAAAATCTCCAAATCTTTTGGTAGACAAGAAGTATACAGTAAAGGTTTGTGATTTTGGTCTCTCCCGTTTGAAGGCACGCACATTTCTTTCATCAAAATCTGCAGCTGGAACACCTGAATGGATGGCTCCAGAAGTACTCCGTGATGAGCCCTCAAATGAAAAATCAGATGTTTACAGCTTTGGAGTGATTTTGTGGGAGTTGGCTACTTTGCAACAGCCGTGGTGTAGTCTAAACCCAGCTCAGGTTGTAGCAGCTGTTGGATTTAAGGGCAAAAGGCTTGAGATTCCAAGGGATGTAAATCCCAAAGTGGCTTCCTTAATAGAGGCTTGCTGGGCCAATGAGCCTTGGAAACGTCCATCTTTTTCCAGCATAATGGAATGCTTGAAGCCAATGACTAAACAGCCACCTCCTCCTCAACAAAGTCGTGCTAACCCGCTCTCAATTATG 2571 45.7 MPGRRLNYTLLSQVPDDQFSGGVSVAGAGTSTYFIESSSGEGKNDKRKLEKGLDWEAGGDHRASQQQVNWIGNMYSAFGLQRQSSGSSFGESSISGEYYAPTPSTTVANETDAFGCTHDDVLRIGGDSRAQAAEMAAGIGGSSSKSWAQQTEESYQLQLALALRLSSEATCADDPNFLNPYQDDSALRRSISSAKAVSHRFWVNGCLSYFDKIPDGFYLIHGMDPYVWTVCTSLLDNDRMPSIESLKSVDPSLDSSIEVVLIDRCTDPNLKDLQNWVQSISSSSITTKEVVDELAKLVCRSLGGSVSGEDVLVSIWRECSDNLKESLGSVVVPLGGLSVGLCRHRALLFKVLADTIDLPCRVAKGCKYCLCHDASSCLVQFGLDKEYLVDLIGNPGCLYEPDSLLNGPSSILISSPLRFPRPKPVEPAVDFRSLAKQYFSDCQLLNIVFDEASSVTMTEITVDGEDGALPYLKQSDRKFTNRNNPMIITGDSDEKSPLMHAKTSQPNSQDRDFHNIIQSTALVGDPIPLNYAPHNIRRSVQSLLDMPQPRMDSTAQGGQLIPSSRSKAVPLGAEDLDIPWNDLVLKERIGAGSFGTVHRADWNGSEVAVKILTEQDFHPERVNEFLREVAIMKSLRHPNIVLFMGAVTKPPNLSIVTEYLSRGSLYRLLHKSGAKDIDETRRLSMAYDVAKGMNYLHRRDPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKARTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWCSLNPAQVVAAVGFKGKRLEIPRDVNPKVASLIEACWANEPWKRPSFSSIMECLKPMTKQPPPPQQSRANPLSIM 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17396094 17407737 - MC05g1316 Mch5g1658 689077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1658 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch5g1658 857 MobiDBLite consensus disorder prediction 482 510 - -
Mch5g1658 857 PRINTS Tyrosine kinase catalytic domain signature 657 670 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch5g1658 857 PRINTS Tyrosine kinase catalytic domain signature 744 754 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch5g1658 857 PRINTS Tyrosine kinase catalytic domain signature 697 715 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch5g1658 857 PRINTS Tyrosine kinase catalytic domain signature 763 785 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch5g1658 857 PRINTS Tyrosine kinase catalytic domain signature 807 829 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch5g1658 857 Pfam Protein tyrosine and serine/threonine kinase 584 836 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch5g1658 857 SMART serkin_6 583 840 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g1658 857 ProSitePatterns Protein kinases ATP-binding region signature. 589 610 IPR017441 GO:0005524(InterPro)
Mch5g1658 857 FunFam Serine/threonine-protein kinase CTR1 662 846 - -
Mch5g1658 857 SUPERFAMILY Protein kinase-like (PK-like) 565 836 IPR011009 -
Mch5g1658 857 PANTHER SERINE-THREONINE PROTEIN KINASE 153 838 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch5g1658 857 Pfam Ethylene-responsive protein kinase Le-CTR1 194 398 - -
Mch5g1658 857 FunFam Serine/threonine-protein kinase isoform 1 573 661 - -
Mch5g1658 857 ProSiteProfiles Protein kinase domain profile. 583 840 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g1658 857 Gene3D Phosphorylase Kinase; domain 1 576 661 - -
Mch5g1658 857 Gene3D Transferase(Phosphotransferase) domain 1 662 846 - -
Mch5g1658 857 CDD STKc_MAP3K-like 589 834 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1658 Mch-Chr5:17396094 Mch6g1662 Mch-Chr6:18444872 7.35E-142 dispersed
Mch7g1064 Mch-Chr7:14680084 Mch5g1658 Mch-Chr5:17396094 2.53E-27 dispersed
Mch11g0714 Mch-Chr11:4713349 Mch5g1658 Mch-Chr5:17396094 2.85E-201 transposed
Mch3g1592 Mch-Chr3:17863029 Mch5g1658 Mch-Chr5:17396094 7.67E-134 transposed
Mch1g0900 Mch-Chr1:12340518 Mch5g1658 Mch-Chr5:17396094 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77426 PF07714 PK_Tyr_Ser-Thr 1.60E-71 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1658 K14510 - csv:101208452 1484.16