Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g1667 | ATGGAGATTGAAATTGCAGGGTTTATTTTAGTGTCTTTTCTGTGGGCTTTATGGGTCTGGCGCCGCCGTGGAGCGGCGGAGGAGACGGGGCAGCTTCCGCCGGGGCCGCCGCGTTGGCCGGTGGTCGGAAACTTGCCCCAACTCGGCTGGTCCGCTCACGAGTCGTTCACTAAACTCGCCGCGAAGTACGGCCCAATCATGAGCCTCCACCTCGGATCCATGAGCACGGTGGTGATCTCATCAAGCGAGGCGGCGCGTGAGATGTTCAAGAACCACGACGCGCCGCTCGCGGGGCGGAAGATCTACGAGGCAATGAGGGGGGACCACGGCACGGAAGGCTCCGTGATCGCGTCCCAGCACGGGCCACACTGGCGAATGCTAAGGCGTTTACTCACGACGGAGTTCTTCGTCACGCGCCGCCTGGACGCCACTCAGAACGTCCGGCGGCGGTGCATTGACGCGATGCTGCGGTTCATGGAGGAGAGCGGCGGCGGCGGCGCGTGTGGAATCGACGTGGGAAAATTAATCTTCGTAATGAGCTTCAATTTAATCGGAAACCTGATATTTTCGAGAGATCTTTTGAACCCCAATTCGAAGAGAGGAAACGAATTTTACTACCACGCGAGGAAGGTGATGGAGACGGCCGGAAAACCGAACGTGGCGGATTTTTTGCCGTTTTTCCGGCGGGTGGATCCGCAGGGGATTAGGAGGAAAACGCAGTTTCATGTGAACAAGGCGTTCGAAATCGCCGGTGAGTTCATCGGAGAGAGATTATTGGCCGGGGAAGATGGCCGGAGAGGGAAAAAGGATTATTTAGATGTGCTTTTGGAATTTCGCGGCGACGGCGAAGAACAGCCCTCTTCTTTCTCTTCCTGGATCATTAACGTTATCGTCTTCGAGATGTTCACGGCGGGGACGGACACGACGACCAGTACACTAGAGTGGGCGATGGCGGAGCTCCTCCACAACCCGGCGGCGATGAAGAAACTCCAAACGGAGCTACGAAACGCAATCCCGCCGGAAAATAGCCTTGAAGAAAGCCACCTCCAAAGCCTCCCTTATCTGGCTGCCGTCGTGAAGGAGACGCTCCGCCTCCACCCGCCGCTGCCCTTCCTCTTCCCCCGCATGGCCCTCAAGCCCTGCACCCTCCTCGGCTACCGGATTCCGGCGGAGACCCAAGTCCTCGTCAACGTCTGGGCCATCGGCCGGGACCCCACCAACTGGAGAGACTCTTCCGTGTTCTCGCCGGAGAGATTCTTGGAGCCCGGCGGGGGCGGCGGCAAGGATTTTAAAGGCCAGCATTATGACTTTCTTCCGTTCGGCTCCGGCCGCCGCATGTGCCCGGCGGTGCCGCTGGCGGCGCGGGTGCTTCCGATGGCTTTGGGCTCGTTGATTTTGGCGTTTGATTGGGCTCTGCCGGACGGAGCTACGCCGGAGGAGATGGACATGTCGGAGCAAATGGGGATTACTCTTAGAAAGGCGGTTCCTCTTGTGGCCGTTCCAGTACCTCCTAAACGACGTCGTTTC | 1527 | 58.81 | MEIEIAGFILVSFLWALWVWRRRGAAEETGQLPPGPPRWPVVGNLPQLGWSAHESFTKLAAKYGPIMSLHLGSMSTVVISSSEAAREMFKNHDAPLAGRKIYEAMRGDHGTEGSVIASQHGPHWRMLRRLLTTEFFVTRRLDATQNVRRRCIDAMLRFMEESGGGGACGIDVGKLIFVMSFNLIGNLIFSRDLLNPNSKRGNEFYYHARKVMETAGKPNVADFLPFFRRVDPQGIRRKTQFHVNKAFEIAGEFIGERLLAGEDGRRGKKDYLDVLLEFRGDGEEQPSSFSSWIINVIVFEMFTAGTDTTTSTLEWAMAELLHNPAAMKKLQTELRNAIPPENSLEESHLQSLPYLAAVVKETLRLHPPLPFLFPRMALKPCTLLGYRIPAETQVLVNVWAIGRDPTNWRDSSVFSPERFLEPGGGGGKDFKGQHYDFLPFGSGRRMCPAVPLAARVLPMALGSLILAFDWALPDGATPEEMDMSEQMGITLRKAVPLVAVPVPPKRRRF | 509 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 17467804 | 17471183 | - | MC05g1324 | Mch5g1667 | 689086 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g1667 | 509 | FunFam | Cytochrome P450 76C4 | 25 | 500 | - | - | |
| Mch5g1667 | 509 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 12 | 504 | - | - | |
| Mch5g1667 | 509 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | PRINTS | E-class P450 group I signature | 356 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | CDD | CYP76-like | 60 | 493 | - | - | |
| Mch5g1667 | 509 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch5g1667 | 509 | SUPERFAMILY | Cytochrome P450 | 33 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | Pfam | Cytochrome P450 | 33 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g1667 | 509 | Gene3D | Cytochrome P450 | 19 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch5g1667 | Mch-Chr5:17467804 | Mch6g1963 | Mch-Chr6:22093606 | 1.36E-116 | dispersed | |
| Mch5g1667 | Mch-Chr5:17467804 | Mch9g2304 | Mch-Chr9:23226720 | 4.20E-96 | transposed |
Pathway information