Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1718 ATGGCGGCGTCAAGTTTCAGCAGCGGCAACGCCTTCTGGTACCAGCTGTTGTTCGGCCGTTGGTTCTCCGTCTTCGCTTCCGTACTAATCATGTCCGTCTCCGGCGCCACCTACATGTTCGGCCTCTACTCCTCCGACATCAAATCCTCCTTAGCCTACGACCAAACCACCCTCAATTTGCTCAGCTTCTTCAAGGACTTGGGCGGCAACGTTGGAGTCATCGGCGGCCTCATCAACGAGGTCGCCCCGCCGTGGGTCGTCCTCCTAATCGGCGCCGTCATGAACCTCTTCGGCTACACCATGATCTGGCTCGCCGTCACCGCCCGGATTCCGAATCCCCAAATCTGGCAAATGTGTTTGTACATTTGCATCGGAGCAAATTCCCAGACGTTCGCCAACACCGGAGCTCTGGTCACCTGCGTCAAGAACTTCCCGGAGAGCCGGGGCAGCGTTTTGGGGCTCCTCAAGGGCTTCGTCGGATTAAGCGGCGCCGTTTTGACGCAGCTTTACCACGCCTTCTACGGCAATAATTCCAAATCCCTAATCCTCCTCATTGCCTGGCTTCCGGCCGCCGTCTCCGTCGCTTTCCTCCGATTCGTCCGGATCATTAAGGATCTCCGGCAGCCGAATGAGCTCAGAGTTTTCTACCATTTTCTTTACATCTCCCTCGGCCTCGCCGGGTCGCTTATGGTTTTGATTATTGTGCAAAATCGACTCCGATTTCAGCAGATGGAGTACGCCGGAAGTGCCTGTATCGTGCTTGTTCTGCTTCTGTTGCCATTAGCCGTCGTCTTCAGAGAGGAATTGAGCGTGTGGAAGAGTAAAATTGAGAACCCAATTTCTCAATTGGAGTTGGCATCTCAACAATCGCCGCCGCTGCCGCCGCCGAGTAGTCCTCAGTCGGATTCTTGTGTGCAAAATGTGTTCAAGCCGCCGAACAGAGGAGAGGACTACACCATACTGCAGGCAGTTTTCAGCGTCGATATGATGATTCTGTTCGTCGCCACAATCTGCGGCGTCGGCGGGACGTTGACGGCGATTGACAATTTGGGGCAAATCGGAGAATCGTTGGGATACCCATCTCAGAGCACCACCACTTTCATCTCCCTGGTCAGCATCTGGAACTATCTCGGCCGCGTGGTCGCCGGATTCGCGTCGGAATTCCTCTGGAAAAAGTACAAAATCCCACGCCCTCTGTTCTTCTTCATAACCCTTCTTCTATCCTGCGTCGGCCATCTTCTGATCGCGTTCGGAGTCCCGAATTCGCTGTATTTCTCCTCGATCATCATCGGGTTCTGCTTCGGAGCGCAGTGGCCGTTGATTTTCGCGATCATTTCGGAGATCTTCGGGCTGAAGTATTACGCGACGCTGTACAATTTGGGGGGAGTGGCGAGCCCAATCGGTGCGTACATTTTGAACGTGAGAGTGGCCGGGAATTTGTACGACAGAGAGGCGCGGCGGCAGATGGAGGCGGCGGGGCTGAGGAGGAAAACAGGGGAGGATTTGAGGTGTGTGGGAGTGGAGTGTTACAGAATGGCGTTTCTTATTATCACGGCGGCGACGGTGTTTGGGGGCCTTGTTTCGCTCATTTTGGTGGTTCGGACATGGAAGTTTTACAAGGGAGATATTTACAGCAAGTTCAGAGAAGAAGAAGATGGAGCCGCTGAAGGTTCGAAAATGGCCGCTCCGAACAGTACGATGCCGGCGGCAAAA 1713 54.29 MAASSFSSGNAFWYQLLFGRWFSVFASVLIMSVSGATYMFGLYSSDIKSSLAYDQTTLNLLSFFKDLGGNVGVIGGLINEVAPPWVVLLIGAVMNLFGYTMIWLAVTARIPNPQIWQMCLYICIGANSQTFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAVLTQLYHAFYGNNSKSLILLIAWLPAAVSVAFLRFVRIIKDLRQPNELRVFYHFLYISLGLAGSLMVLIIVQNRLRFQQMEYAGSACIVLVLLLLPLAVVFREELSVWKSKIENPISQLELASQQSPPLPPPSSPQSDSCVQNVFKPPNRGEDYTILQAVFSVDMMILFVATICGVGGTLTAIDNLGQIGESLGYPSQSTTTFISLVSIWNYLGRVVAGFASEFLWKKYKIPRPLFFFITLLLSCVGHLLIAFGVPNSLYFSSIIIGFCFGAQWPLIFAIISEIFGLKYYATLYNLGGVASPIGAYILNVRVAGNLYDREARRQMEAAGLRRKTGEDLRCVGVECYRMAFLIITAATVFGGLVSLILVVRTWKFYKGDIYSKFREEEDGAAEGSKMAAPNSTMPAAK 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17874044 17875756 - MC05g1364 Mch5g1718 689137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1718 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 20 547 - GO:0016020(PANTHER)
Mch5g1718 571 CDD MFS_Mch1p_like 19 524 - -
Mch5g1718 571 Gene3D MFS general substrate transporter like domains 319 538 IPR036259 -
Mch5g1718 571 MobiDBLite consensus disorder prediction 552 571 - -
Mch5g1718 571 Pfam Nodulin-like 20 265 IPR010658 -
Mch5g1718 571 SUPERFAMILY MFS general substrate transporter 24 540 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0549 Mch-Chr3:9641114 Mch5g1718 Mch-Chr5:17874044 2.09E-188 dispersed
Mch5g1718 Mch-Chr5:17874044 Mch9g1815 Mch-Chr9:19944044 2.28E-224 dispersed
Mch2g1001 Mch-Chr2:6795977 Mch5g1718 Mch-Chr5:17874044 1.07E-93 transposed
Mch4g2598 Mch-Chr4:26314156 Mch5g1718 Mch-Chr5:17874044 2.57E-102 transposed
Mch7g0789 Mch-Chr7:12518703 Mch5g1718 Mch-Chr5:17874044 6.62E-36 transposed
Mch8g1091 Mch-Chr8:7703457 Mch5g1718 Mch-Chr5:17874044 5.39E-75 transposed
Mch1g0852 Mch-Chr1:11935173 Mch5g1718 Mch-Chr5:17874044 1.54E-265 wgd
Mch4g2023 Mch-Chr4:22522542 Mch5g1718 Mch-Chr5:17874044 7.50E-246 wgd
Mch5g1718 Mch-Chr5:17874044 Mch9g1814 Mch-Chr9:19936996 2.52E-266 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1718 - - - 0.0