Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g1752 | ATGGCGACCAACGACATTGAAATCGGCGGTCCGGGGGCGGCGTCCCGGAAGGACTATTTTGAGCCGCTGCCGGCGCCGGTGATCGATATGGAGGAATTTACCAAATGGTCCTTTTACAGAGCCATAATCGCGGAGTTCGTCGCGACTCTGTTGTTCCTGTACGTCACCATTTTGACGGTGATCGGCTACAAGACCCAAACGGACCTGCTCCGCGGCGGCAGCGTCTGCGGCGGCGTCGGCCCCGTCGGAGTCTCGTGGGTCTTCGGCGGCATGATCTTCGTCCTCGTTTACTGCATCGCCGGAATCTCTGGAGGGCACATAAATCCGGCGGTGACATTTGGAATGTTTTTGGCGAGAAAGATTTCATTGGTGCGCGCCTTGTTGTACATCATTGCCCAGTGCGTAGGCGCCATCTGTGGCTGCGCCTTGGTCAAGACCTTGCAGAGGGACCAATACAACCGCTACGGCGGCGGCGCCAACCGACTCGCCCACGGCTACGGCAGAGGCACCGGCTTGGCCGTCGAGATCGTCGGCACCTTCATCCTCCTTTACACCGTCTTCTCCGCCACTGATCCCAAACGGAATGCCAGAGATTCCCATGTTCCGGCGTTGGCTCCACTCCCAATTGGGTTCGCGGTGTTCATGGTCCACCTCGCCACAATTCCGATCACCGGCACCGGAATCAACCCAGCCCGGAGCTTCGGCGCCGCCGTCATCATCAACGACAAAAAAATATGGAAAGATCAATGGCTTTTTTGGGTGGGACCACTGATCGGAGCAACCATCGCCGCCATGTACTACCAATATGTTCTCAGAGCTTCCGCCGTCAGAAGGCTCGGCTCTTTCAGAAGCTCGCCGCCGTCTCGCTACTAG | 873 | 58.08 | MATNDIEIGGPGAASRKDYFEPLPAPVIDMEEFTKWSFYRAIIAEFVATLLFLYVTILTVIGYKTQTDLLRGGSVCGGVGPVGVSWVFGGMIFVLVYCIAGISGGHINPAVTFGMFLARKISLVRALLYIIAQCVGAICGCALVKTLQRDQYNRYGGGANRLAHGYGRGTGLAVEIVGTFILLYTVFSATDPKRNARDSHVPALAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIINDKKIWKDQWLFWVGPLIGATIAAMYYQYVLRASAVRRLGSFRSSPPSRY | 290 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 18123479 | 18125689 | + | MC05g_new0358 | Mch5g1752 | 689171 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g1752 | 290 | ProSitePatterns | MIP family signature. | 106 | 114 | IPR022357 | - | |
Mch5g1752 | 290 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 13 | 284 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Mch5g1752 | 290 | CDD | MIP | 40 | 270 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch5g1752 | 290 | PRINTS | Major intrinsic protein family signature | 88 | 112 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch5g1752 | 290 | PRINTS | Major intrinsic protein family signature | 250 | 270 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch5g1752 | 290 | PRINTS | Major intrinsic protein family signature | 40 | 59 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch5g1752 | 290 | PRINTS | Major intrinsic protein family signature | 125 | 144 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch5g1752 | 290 | PRINTS | Major intrinsic protein family signature | 210 | 232 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch5g1752 | 290 | PRINTS | Major intrinsic protein family signature | 174 | 192 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch5g1752 | 290 | FunFam | Probable aquaporin PIP1-2 | 25 | 286 | - | - | |
Mch5g1752 | 290 | SUPERFAMILY | Aquaporin-like | 31 | 272 | IPR023271 | - | |
Mch5g1752 | 290 | Gene3D | Glycerol uptake facilitator protein. | 25 | 288 | IPR023271 | - | |
Mch5g1752 | 290 | Pfam | Major intrinsic protein | 32 | 267 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch5g1752 | 290 | NCBIfam | MIP family channel protein | 44 | 267 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch5g1752 | Mch-Chr5:18123479 | Mch9g1489 | Mch-Chr9:17287242 | 1.63E-124 | dispersed | |
Mch1g0798 | Mch-Chr1:11604393 | Mch5g1752 | Mch-Chr5:18123479 | 7.70E-137 | wgd | |
Mch2g0356 | Mch-Chr2:2667614 | Mch5g1752 | Mch-Chr5:18123479 | 7.70E-150 | wgd | |
Mch4g2057 | Mch-Chr4:22803334 | Mch5g1752 | Mch-Chr5:18123479 | 8.95E-149 | wgd | |
Mch5g1752 | Mch-Chr5:18123479 | Mch9g1784 | Mch-Chr9:19720111 | 3.12E-147 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch5g1752 | K09872 | - | csv:101214142 | 498.049 |