Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1761 ATGGCGGCCAAGAACCATTTCAGCTTTCTTTTTCTTCTCCTCTTGCAGTTGCAGCTCTTCTATTCAGGAAGGAGCGATCTGCAATTAAATTATTACGCAAAAAGCTGCCCAAAAGCTGAAGAAATTATAAAACAGCAAGTTATGGATCTCTACTACGAACATGGAAACACCGCCGTTTCATGGCTCAGAAACCTCTTCCACGACTGCGTTGTCAAGGCTTGCGATGCGTCTTTGCTTTTGGAGACGGTCGTTGGTGTGGAATCGGAGAAGGAATCCGAAAGGAGTTTTGGGATGAGAAATTTCAAATACGTAAACAAGATCAAAGCAGCTGTCGAAAAAGAATGTGCTCTTACTGTTTCTTGTGCCGATATCGTCGCTCTCTCCGCTAGAGACGGCATTGTCATGTTGAAAGGACCTCATATAGAGATGAAAACTGGGAGAAGAGATAGTAAAGTGAGCTATTCACAACTTGTCGAAGAGTTGATCCCAAGGCACAACGATTCCATTATAAACGTTCTCTCGCGCTTTCAATCTATTGGCATTGATACCGAAGCAACTGTCGCTCTATTAGGGGCTCACTCAGTTGGTAGAGTTCATTGTGTGAACTTGGTTGAAAGGCTATATCCAACCGTTGATCCAACCATTGATCCTGAATACGCAAAATACTTAAAAGGTCGATGCCCAACGCCAACCCCTGACCCGAATGCAGTGTTGTATTCAAGAAACGATCGGGAGACTCCAATGATTCTTGACAACATGTACTATAGTAATATACTAAAACACAAGGGCTTGCTCTTGGTGGACCAGCAATTGGTTTCTAACCCTCTCACTCTTCCATATGTCAAGAAGTTTGCGGCTGATAACGACTATTTCCATGCCCAATTCTCTAGGGGTATTCTTTTATTGTCGGAGAATAGTCCGCTCACCGGAGATGAAGGAGAGATTAGAAAAGATTGTCGTTACATTAATTAA 972 43.0 MAAKNHFSFLFLLLLQLQLFYSGRSDLQLNYYAKSCPKAEEIIKQQVMDLYYEHGNTAVSWLRNLFHDCVVKACDASLLLETVVGVESEKESERSFGMRNFKYVNKIKAAVEKECALTVSCADIVALSARDGIVMLKGPHIEMKTGRRDSKVSYSQLVEELIPRHNDSIINVLSRFQSIGIDTEATVALLGAHSVGRVHCVNLVERLYPTVDPTIDPEYAKYLKGRCPTPTPDPNAVLYSRNDRETPMILDNMYYSNILKHKGLLLVDQQLVSNPLTLPYVKKFAADNDYFHAQFSRGILLLSENSPLTGDEGEIRKDCRYIN 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18184085 18186787 + MC05g1402 Mch5g1761 689180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1761 323 Gene3D Peroxidase, domain 2 163 302 - -
Mch5g1761 323 FunFam Peroxidase 163 302 - -
Mch5g1761 323 Pfam Peroxidase 44 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 SUPERFAMILY Heme-dependent peroxidases 26 323 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 CDD secretory_peroxidase 27 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch5g1761 323 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 PANTHER - 11 323 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch5g1761 323 Gene3D - 30 323 - -
Mch5g1761 323 FunFam Peroxidase 30 173 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1761 Mch-Chr5:18184085 Mch6g0723 Mch-Chr6:4975018 2.32E-52 dispersed
Mch3g1240 Mch-Chr3:15491562 Mch5g1761 Mch-Chr5:18184085 9.98E-129 transposed
Mch1g0791 Mch-Chr1:11556434 Mch5g1761 Mch-Chr5:18184085 4.22E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1761 K00430 - csv:101215428 570.081