Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1798 ATGGCTACTCCAACTGTGGTGGTGCCGGAAGTTCGTCCGCCGTCGTTGGAAGCCACCGCCGAACAACCTCCGCTCTTCGACGGAACCACCAGGTTGTATATGGCTTACTATTGCCCATTTGCGCAGCGTCCTTGGATTACAAGAAATTACAAGGGATTGCAAGATCAAATTAAGCTAGTGCCTCTAAACATTCAAAATAGGCCTCACTGGTATAAGGAAAAAGTCTACCCTCCAAACAAGGTGCCAGCTTTGGAACACAATGGAAAAGTAATTGGAGAAAGTCTTGATTTGATCAAATACATAGATAGCAACTTTGAAGGACCTTCTCTTTTCCCAAATGATCCTGCTAGAACAGAATTTGGTGAAGAGTTGCTAAATTATATTGATACATTTACTGGAGCAGTATACCCTTCATTTAAGGGTGACCCAGCTAAAGAAGCAGGCAGTCCTCAATTTGATTACCTTGAGAATGCTCTCCAGAAATTCGATGATGGGCCATTCTTTTTGGGTCAATTCAGTGGGGTGGACATTGCATACATTACATTTATAGAAAGGTTCCAAGTATTCTTATCTGAGGTTTTCAAGTATGATATCACAGAAGGAAGGCCTAATCTAGCTGTATGGATTGAGGAGTTTGACAAGATTGATGCCTACAAGCAAACAAAGTATGATCCTCAAGCCATTGTTGAGCTTTATAAAAAGCGTTTCATGGCTTGA 717 41.7 MATPTVVVPEVRPPSLEATAEQPPLFDGTTRLYMAYYCPFAQRPWITRNYKGLQDQIKLVPLNIQNRPHWYKEKVYPPNKVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPNDPARTEFGEELLNYIDTFTGAVYPSFKGDPAKEAGSPQFDYLENALQKFDDGPFFLGQFSGVDIAYITFIERFQVFLSEVFKYDITEGRPNLAVWIEEFDKIDAYKQTKYDPQAIVELYKKRFMA 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18391002 18394645 - MC05g1427 Mch5g1798 689217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1798 238 FunFam Lambda class glutathione S-transferase 107 238 - -
Mch5g1798 238 Gene3D - 107 238 - -
Mch5g1798 238 SFLD Main (cytGST) 31 212 - -
Mch5g1798 238 PANTHER GLUTATHIONE S-TRANSFERASE L1 7 237 IPR044629 GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER)
Mch5g1798 238 Gene3D Glutaredoxin 3 106 - -
Mch5g1798 238 Pfam Glutathione S-transferase, N-terminal domain 32 108 IPR004045 -
Mch5g1798 238 SUPERFAMILY Thioredoxin-like 23 110 IPR036249 -
Mch5g1798 238 SUPERFAMILY GST C-terminal domain-like 105 236 IPR036282 -
Mch5g1798 238 FunFam Glutathione S-transferase L2, chloroplastic 3 106 - -
Mch5g1798 238 Pfam Glutathione S-transferase, C-terminal domain 152 210 - -
Mch5g1798 238 CDD GST_C_Lambda 114 233 - -
Mch5g1798 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 28 109 IPR004045 -
Mch5g1798 238 SFLD Glutathione Transferase (cytosolic) 31 212 IPR040079 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1728 Mch-Chr11:16333020 Mch5g1798 Mch-Chr5:18391002 6.36E-17 dispersed
Mch5g1798 Mch-Chr5:18391002 Mch9g1619 Mch-Chr9:18349787 2.36E-114 dispersed
Mch5g1796 Mch-Chr5:18365030 Mch5g1798 Mch-Chr5:18391002 4.42E-119 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1798 K00799 - csv:101210004 425.246