Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1801 AAAATGGTTAAACCCTGCTGGAAACCCCATGATGATGGCGATTCAAACGGACGAGTTGATGGGTTGTTGTGGTCTAAGGATCTGGGGCATCATGTTTATGGACAATTCTCCATGGCAGTAATCCAAGCTAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCATTGAGTATGACCAACCCGGGTCCGCAGGGGACTTTCGTCGGAGTCTACGACGGCCATGGTGGAACCGAGGCTTCACGGTTTGTCAACGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTGCATCAAAGCATATCAGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGATTTCTCTCTCTTGTCCAGAAGCAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTGGGGATCATATGCAATGGACAACTATATATTGCAAATGCAGGTGATTCGAGAGTAGTGCTTGGGAGAACTGAGAGAGCCACTAAAGAAGTCATTGCCATTCAACTCTCCGCAGAGCACAATGCAAGCATAGACTCAGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCTCAGATTGTGATTCTAAAACACAATGTTTGGCGAGTTAAAGGTCTCATACAGATTTCAAGATCCATTGGTGATGCATATTTGAAGAAGGCACAATTCAATAGACCTCCTCTGCCACCTAAATTTCAACTGCCTGAGCCATTTTACAAACCGATCCTCAGTGCAGAACCATCAACGCTGGTACACAAACTCCGTCCAGAAGATCAATATCTCATATTTGCTTCTGATGGCCTTTGGGAGCACCTTAGCAACCAGAAGACTGTTGACATCGTCAACAGCTATCCTCGAAATGGAATAGCAAGGAGACTTGTCAAGGCTGCACTTCGAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGATAGAGGGGTGAGAAGGCATTTCCACGACGACATCTCTGTGGTAGTTGTGTTCTTAGATCCTCATTTGATCAATGGTAGGCCGGCCCCCTGTTCCTTGTCAATCAGAGGAGGAGAAGGTCTCCCTTCATCGGCAAACTCCTAG 1116 45.25 KMVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQSISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATKEVIAIQLSAEHNASIDSVRDELRMVHPEDPQIVILKHNVWRVKGLIQISRSIGDAYLKKAQFNRPPLPPKFQLPEPFYKPILSAEPSTLVHKLRPEDQYLIFASDGLWEHLSNQKTVDIVNSYPRNGIARRLVKAALREAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPHLINGRPAPCSLSIRGGEGLPSSANS 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18398076 18399981 - MC05g1428 Mch5g1801 689220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1801 371 Pfam Protein phosphatase 2C 65 312 IPR001932 -
Mch5g1801 371 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169(InterPro)
Mch5g1801 371 FunFam Phosphatase 2C family protein 24 352 - -
Mch5g1801 371 SUPERFAMILY PP2C-like 34 345 IPR036457 -
Mch5g1801 371 ProSiteProfiles PPM-type phosphatase domain profile. 35 343 IPR001932 -
Mch5g1801 371 CDD PP2Cc 33 343 IPR001932 -
Mch5g1801 371 SMART PP2C_4 13 341 IPR001932 -
Mch5g1801 371 Gene3D - 24 350 IPR036457 -
Mch5g1801 371 PANTHER PROTEIN PHOSPHATASE 29 342 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0471 Mch-Chr4:3011548 Mch5g1801 Mch-Chr5:18398076 1.69E-168 dispersed
Mch5g1439 Mch-Chr5:15484369 Mch5g1801 Mch-Chr5:18398076 1.78E-139 dispersed
Mch5g1801 Mch-Chr5:18398076 Mch7g1243 Mch-Chr7:15956850 3.85E-130 dispersed
Mch5g1801 Mch-Chr5:18398076 Mch9g1618 Mch-Chr9:18342636 3.42E-185 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1801 K01102 - csv:101210750 708.753