Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g1801 | AAAATGGTTAAACCCTGCTGGAAACCCCATGATGATGGCGATTCAAACGGACGAGTTGATGGGTTGTTGTGGTCTAAGGATCTGGGGCATCATGTTTATGGACAATTCTCCATGGCAGTAATCCAAGCTAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCATTGAGTATGACCAACCCGGGTCCGCAGGGGACTTTCGTCGGAGTCTACGACGGCCATGGTGGAACCGAGGCTTCACGGTTTGTCAACGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTGCATCAAAGCATATCAGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGATTTCTCTCTCTTGTCCAGAAGCAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTGGGGATCATATGCAATGGACAACTATATATTGCAAATGCAGGTGATTCGAGAGTAGTGCTTGGGAGAACTGAGAGAGCCACTAAAGAAGTCATTGCCATTCAACTCTCCGCAGAGCACAATGCAAGCATAGACTCAGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCTCAGATTGTGATTCTAAAACACAATGTTTGGCGAGTTAAAGGTCTCATACAGATTTCAAGATCCATTGGTGATGCATATTTGAAGAAGGCACAATTCAATAGACCTCCTCTGCCACCTAAATTTCAACTGCCTGAGCCATTTTACAAACCGATCCTCAGTGCAGAACCATCAACGCTGGTACACAAACTCCGTCCAGAAGATCAATATCTCATATTTGCTTCTGATGGCCTTTGGGAGCACCTTAGCAACCAGAAGACTGTTGACATCGTCAACAGCTATCCTCGAAATGGAATAGCAAGGAGACTTGTCAAGGCTGCACTTCGAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGATAGAGGGGTGAGAAGGCATTTCCACGACGACATCTCTGTGGTAGTTGTGTTCTTAGATCCTCATTTGATCAATGGTAGGCCGGCCCCCTGTTCCTTGTCAATCAGAGGAGGAGAAGGTCTCCCTTCATCGGCAAACTCCTAG | 1116 | 45.25 | KMVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQSISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATKEVIAIQLSAEHNASIDSVRDELRMVHPEDPQIVILKHNVWRVKGLIQISRSIGDAYLKKAQFNRPPLPPKFQLPEPFYKPILSAEPSTLVHKLRPEDQYLIFASDGLWEHLSNQKTVDIVNSYPRNGIARRLVKAALREAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPHLINGRPAPCSLSIRGGEGLPSSANS | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 18398076 | 18399981 | - | MC05g1428 | Mch5g1801 | 689220 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g1801 | 371 | Pfam | Protein phosphatase 2C | 65 | 312 | IPR001932 | - | |
Mch5g1801 | 371 | ProSitePatterns | PPM-type phosphatase domain signature. | 69 | 77 | IPR000222 | GO:0043169(InterPro) | |
Mch5g1801 | 371 | FunFam | Phosphatase 2C family protein | 24 | 352 | - | - | |
Mch5g1801 | 371 | SUPERFAMILY | PP2C-like | 34 | 345 | IPR036457 | - | |
Mch5g1801 | 371 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 343 | IPR001932 | - | |
Mch5g1801 | 371 | CDD | PP2Cc | 33 | 343 | IPR001932 | - | |
Mch5g1801 | 371 | SMART | PP2C_4 | 13 | 341 | IPR001932 | - | |
Mch5g1801 | 371 | Gene3D | - | 24 | 350 | IPR036457 | - | |
Mch5g1801 | 371 | PANTHER | PROTEIN PHOSPHATASE | 29 | 342 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch4g0471 | Mch-Chr4:3011548 | Mch5g1801 | Mch-Chr5:18398076 | 1.69E-168 | dispersed | |
Mch5g1439 | Mch-Chr5:15484369 | Mch5g1801 | Mch-Chr5:18398076 | 1.78E-139 | dispersed | |
Mch5g1801 | Mch-Chr5:18398076 | Mch7g1243 | Mch-Chr7:15956850 | 3.85E-130 | dispersed | |
Mch5g1801 | Mch-Chr5:18398076 | Mch9g1618 | Mch-Chr9:18342636 | 3.42E-185 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch5g1801 | K01102 | - | csv:101210750 | 708.753 |