Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1814 ATGCCGAGGAAAGGGATGAGGAGCCTCCTCTTTCAATGGTCGTTGTCGCCGTCGAACTCCATCTCGCGGTACTCGATCTCGTCGCCGTCGAGGTCGCCGGCCTTGACTCCACGGCGAAACTTCAACGAGGCGATGATCGAGCAGACCGTGGAATCGGCGGCCGCCATTATAATGAAATGGAATCCGGATTCTTCGACTTACGCCAAAGTTACTTCGATGTTCTACGAAGATAAAAGAGAGGCCATGCAGTTCATCAAGCGCGTGAATGATCTTCAGAAAGTCATGCATTTGATGGTTTCGGAAGATTCCAGTTCCGCCTCCGATAGGCTTGTTTACGCTAAAGATTTGATGGAAATCGCCATGAAACGGCTTCAGAAGGAGTTTTATCAAATCCTCTCGATGAATCGCGCGCATCTTGATCCGGAGTCTGTCTCCGCCCGATCCTCCCGCTGCTCCACCAGATCGAGCACCTCCGCTGATTTCGACGATGACGGCACTGTCGATGATGAAATCCAGGTGGTAAGCGATTCGATCTCTGAAGTTGAGCAAGTTTCTTCAATTGTGATGGAGGATTTGCGAACCATAGCAGAGTGCATGATCTCCTCTGGTTACGCTAAAGAGTGCGTCGGTATGTACAAAATAGTTCGAAAATCGATAATCGATGAAGGTGTGTACCGCCTCGGACTCGAGAAATTGAGCCCTTCGCGAATCAACAAGATGGACTGGGAAGTGCTCGAGCTTAAAATCAAGAACTGGTTGGATTCAATTAAGCTCGCGATTAGAACGTTGTTCACTGGCGAACGAATCCTCTGCGATCACGTCTTCGCGTCGTCTGAATCAATCAGAGAATCCTGTTTTGCTGATATATCCAGAGACGGTGCTCTGATTCTGTTAGGATTCCCGGAACTTGTTGCTAAGAGCAAGAAATCGCCGGAAAAAATGTTCCGTGTTCTCGATATGTACTCATCGATCGCCGAGAATTGGCCGGAAATCGAATCGATTTTCTCCTCGGAGTCCACATCTGCAGTTCGATCGCAAGCCCTAACCTCACTTGCGAAACTAGCCGAGTTGGTCCGTGCAATAGTAATGGATCTCGAACTGTCAATTCAGAAGAATTCGTCCAAATCGCCAGTCGCTGGCGGTGGCGTTCATTTTGTGACGCTTCTCTCGATGAATTACCTCACTTTCCTCGCCGATTATAGCACCGCTTTGACGGAAATTTTCGCCGACTGGATTCCACCAGAGAAATCCTCTCTCGATCAAATCGTATTCGGCAATCCAGAATCCGACGACAATTCGACTAATTCCACTAGAGATTCCGCTAGAGATTCTGCGATTTCTTTACGCATGGGATGGCTAATTCTAGTCCTCGTCTGCAAGCTTGATAACAAAGCAAAGCGCTACAAAGACGTTTCACTTTCATATCTATTCCTCGCTAATAATCAATACATCGTCTCCAAAGTCCGATCGTCGAATCTTCAATACCTTCTCGGCGACGAGTGGATCACGAAGCACGAGGCCAAAGTGAGGCAATTCGCCGCCAAATACGAGTCGCTGGCCTGGGGCAGAGTCTTCGCATCATTGCCGGAGGATCCGACGGAGAAATTTTCACAGGAAGATACGAAGGAAATCTTCCGCAACTTCAATATGGCGTTCCAAGAAACGCATCGCAAACAGAAGTCCTGCTTCATTTCGGATCCAAAGCTTCGAGACGAAGTTAAATTATCAATCGGAACGAAGCTTGTGTCGTTCTATCAAGAATTTTACAGAGCGCAAAAAGCTTACGCCGGTGGCAACGAAAGGCCGTACATCAGATTTTCGCCGGAAGACGTCGGTAACTACATATCGGATCTCTACTTCGAGCCGACCGATTGGGCCAGCGTTTCGACCTCCTCACCGTCGTCGACCTCGTCCTCTCACAGGCGGGAAGCGGGGCCCCGT 1941 49.0 MPRKGMRSLLFQWSLSPSNSISRYSISSPSRSPALTPRRNFNEAMIEQTVESAAAIIMKWNPDSSTYAKVTSMFYEDKREAMQFIKRVNDLQKVMHLMVSEDSSSASDRLVYAKDLMEIAMKRLQKEFYQILSMNRAHLDPESVSARSSRCSTRSSTSADFDDDGTVDDEIQVVSDSISEVEQVSSIVMEDLRTIAECMISSGYAKECVGMYKIVRKSIIDEGVYRLGLEKLSPSRINKMDWEVLELKIKNWLDSIKLAIRTLFTGERILCDHVFASSESIRESCFADISRDGALILLGFPELVAKSKKSPEKMFRVLDMYSSIAENWPEIESIFSSESTSAVRSQALTSLAKLAELVRAIVMDLELSIQKNSSKSPVAGGGVHFVTLLSMNYLTFLADYSTALTEIFADWIPPEKSSLDQIVFGNPESDDNSTNSTRDSARDSAISLRMGWLILVLVCKLDNKAKRYKDVSLSYLFLANNQYIVSKVRSSNLQYLLGDEWITKHEAKVRQFAAKYESLAWGRVFASLPEDPTEKFSQEDTKEIFRNFNMAFQETHRKQKSCFISDPKLRDEVKLSIGTKLVSFYQEFYRAQKAYAGGNERPYIRFSPEDVGNYISDLYFEPTDWASVSTSSPSSTSSSHRREAGPR 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18477719 18479663 - MC05g1438 Mch5g1814 689233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1814 647 SUPERFAMILY Cullin repeat-like 53 619 IPR016159 -
Mch5g1814 647 Gene3D Exocyst complex component Exo70 56 624 - -
Mch5g1814 647 Pfam Exo70 exocyst complex subunit C-terminal 250 617 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Mch5g1814 647 MobiDBLite consensus disorder prediction 625 647 - -
Mch5g1814 647 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 620 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch5g1814 647 Pfam Exocyst complex component Exo70 N-terminal 49 133 - -
Mch5g1814 647 MobiDBLite consensus disorder prediction 145 160 - -
Mch5g1814 647 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1814 Mch-Chr5:18477719 Mch8g1301 Mch-Chr8:9489431 1.26E-92 dispersed
Mch5g1814 Mch-Chr5:18477719 Mch5g1815 Mch-Chr5:18484947 0 tandem
Mch1g0755 Mch-Chr1:11350685 Mch5g1814 Mch-Chr5:18477719 8.43E-130 wgd
Mch2g0943 Mch-Chr2:6345832 Mch5g1814 Mch-Chr5:18477719 1.36E-207 wgd
Mch5g1814 Mch-Chr5:18477719 Mch9g1604 Mch-Chr9:18202377 1.64E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1814 K07195 - csv:101208543 1031.17