Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g1814 | ATGCCGAGGAAAGGGATGAGGAGCCTCCTCTTTCAATGGTCGTTGTCGCCGTCGAACTCCATCTCGCGGTACTCGATCTCGTCGCCGTCGAGGTCGCCGGCCTTGACTCCACGGCGAAACTTCAACGAGGCGATGATCGAGCAGACCGTGGAATCGGCGGCCGCCATTATAATGAAATGGAATCCGGATTCTTCGACTTACGCCAAAGTTACTTCGATGTTCTACGAAGATAAAAGAGAGGCCATGCAGTTCATCAAGCGCGTGAATGATCTTCAGAAAGTCATGCATTTGATGGTTTCGGAAGATTCCAGTTCCGCCTCCGATAGGCTTGTTTACGCTAAAGATTTGATGGAAATCGCCATGAAACGGCTTCAGAAGGAGTTTTATCAAATCCTCTCGATGAATCGCGCGCATCTTGATCCGGAGTCTGTCTCCGCCCGATCCTCCCGCTGCTCCACCAGATCGAGCACCTCCGCTGATTTCGACGATGACGGCACTGTCGATGATGAAATCCAGGTGGTAAGCGATTCGATCTCTGAAGTTGAGCAAGTTTCTTCAATTGTGATGGAGGATTTGCGAACCATAGCAGAGTGCATGATCTCCTCTGGTTACGCTAAAGAGTGCGTCGGTATGTACAAAATAGTTCGAAAATCGATAATCGATGAAGGTGTGTACCGCCTCGGACTCGAGAAATTGAGCCCTTCGCGAATCAACAAGATGGACTGGGAAGTGCTCGAGCTTAAAATCAAGAACTGGTTGGATTCAATTAAGCTCGCGATTAGAACGTTGTTCACTGGCGAACGAATCCTCTGCGATCACGTCTTCGCGTCGTCTGAATCAATCAGAGAATCCTGTTTTGCTGATATATCCAGAGACGGTGCTCTGATTCTGTTAGGATTCCCGGAACTTGTTGCTAAGAGCAAGAAATCGCCGGAAAAAATGTTCCGTGTTCTCGATATGTACTCATCGATCGCCGAGAATTGGCCGGAAATCGAATCGATTTTCTCCTCGGAGTCCACATCTGCAGTTCGATCGCAAGCCCTAACCTCACTTGCGAAACTAGCCGAGTTGGTCCGTGCAATAGTAATGGATCTCGAACTGTCAATTCAGAAGAATTCGTCCAAATCGCCAGTCGCTGGCGGTGGCGTTCATTTTGTGACGCTTCTCTCGATGAATTACCTCACTTTCCTCGCCGATTATAGCACCGCTTTGACGGAAATTTTCGCCGACTGGATTCCACCAGAGAAATCCTCTCTCGATCAAATCGTATTCGGCAATCCAGAATCCGACGACAATTCGACTAATTCCACTAGAGATTCCGCTAGAGATTCTGCGATTTCTTTACGCATGGGATGGCTAATTCTAGTCCTCGTCTGCAAGCTTGATAACAAAGCAAAGCGCTACAAAGACGTTTCACTTTCATATCTATTCCTCGCTAATAATCAATACATCGTCTCCAAAGTCCGATCGTCGAATCTTCAATACCTTCTCGGCGACGAGTGGATCACGAAGCACGAGGCCAAAGTGAGGCAATTCGCCGCCAAATACGAGTCGCTGGCCTGGGGCAGAGTCTTCGCATCATTGCCGGAGGATCCGACGGAGAAATTTTCACAGGAAGATACGAAGGAAATCTTCCGCAACTTCAATATGGCGTTCCAAGAAACGCATCGCAAACAGAAGTCCTGCTTCATTTCGGATCCAAAGCTTCGAGACGAAGTTAAATTATCAATCGGAACGAAGCTTGTGTCGTTCTATCAAGAATTTTACAGAGCGCAAAAAGCTTACGCCGGTGGCAACGAAAGGCCGTACATCAGATTTTCGCCGGAAGACGTCGGTAACTACATATCGGATCTCTACTTCGAGCCGACCGATTGGGCCAGCGTTTCGACCTCCTCACCGTCGTCGACCTCGTCCTCTCACAGGCGGGAAGCGGGGCCCCGT | 1941 | 49.0 | MPRKGMRSLLFQWSLSPSNSISRYSISSPSRSPALTPRRNFNEAMIEQTVESAAAIIMKWNPDSSTYAKVTSMFYEDKREAMQFIKRVNDLQKVMHLMVSEDSSSASDRLVYAKDLMEIAMKRLQKEFYQILSMNRAHLDPESVSARSSRCSTRSSTSADFDDDGTVDDEIQVVSDSISEVEQVSSIVMEDLRTIAECMISSGYAKECVGMYKIVRKSIIDEGVYRLGLEKLSPSRINKMDWEVLELKIKNWLDSIKLAIRTLFTGERILCDHVFASSESIRESCFADISRDGALILLGFPELVAKSKKSPEKMFRVLDMYSSIAENWPEIESIFSSESTSAVRSQALTSLAKLAELVRAIVMDLELSIQKNSSKSPVAGGGVHFVTLLSMNYLTFLADYSTALTEIFADWIPPEKSSLDQIVFGNPESDDNSTNSTRDSARDSAISLRMGWLILVLVCKLDNKAKRYKDVSLSYLFLANNQYIVSKVRSSNLQYLLGDEWITKHEAKVRQFAAKYESLAWGRVFASLPEDPTEKFSQEDTKEIFRNFNMAFQETHRKQKSCFISDPKLRDEVKLSIGTKLVSFYQEFYRAQKAYAGGNERPYIRFSPEDVGNYISDLYFEPTDWASVSTSSPSSTSSSHRREAGPR | 647 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 18477719 | 18479663 | - | MC05g1438 | Mch5g1814 | 689233 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g1814 | 647 | SUPERFAMILY | Cullin repeat-like | 53 | 619 | IPR016159 | - | |
Mch5g1814 | 647 | Gene3D | Exocyst complex component Exo70 | 56 | 624 | - | - | |
Mch5g1814 | 647 | Pfam | Exo70 exocyst complex subunit C-terminal | 250 | 617 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Mch5g1814 | 647 | MobiDBLite | consensus disorder prediction | 625 | 647 | - | - | |
Mch5g1814 | 647 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 47 | 620 | IPR004140 | GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER) | |
Mch5g1814 | 647 | Pfam | Exocyst complex component Exo70 N-terminal | 49 | 133 | - | - | |
Mch5g1814 | 647 | MobiDBLite | consensus disorder prediction | 145 | 160 | - | - | |
Mch5g1814 | 647 | MobiDBLite | consensus disorder prediction | 143 | 164 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch5g1814 | Mch-Chr5:18477719 | Mch8g1301 | Mch-Chr8:9489431 | 1.26E-92 | dispersed | |
Mch5g1814 | Mch-Chr5:18477719 | Mch5g1815 | Mch-Chr5:18484947 | 0 | tandem | |
Mch1g0755 | Mch-Chr1:11350685 | Mch5g1814 | Mch-Chr5:18477719 | 8.43E-130 | wgd | |
Mch2g0943 | Mch-Chr2:6345832 | Mch5g1814 | Mch-Chr5:18477719 | 1.36E-207 | wgd | |
Mch5g1814 | Mch-Chr5:18477719 | Mch9g1604 | Mch-Chr9:18202377 | 1.64E-169 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch5g1814 | K07195 | - | csv:101208543 | 1031.17 |