Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1815 ATGCCGAGGAAAGGGATGAGGAGCCTCCTCTTTCAATGGTCGTTGTCGCCTTCGAACTCCATCTCGCGGTACTCGATCTCGTCGCCGTCGAGGTCGCCAGCCTTGACTCCACGGCGAAACTTCAACGAGGCGATGATCGAGCAGACCGTGGAATCGGCGGCCGCCATTATAATGAAATGGAATCCGGATTCTTCGACTTACGCCAAAGTTACTTCGATGTTCTACGAAGATAAAAGAGAGGTCATGCAGTTCATCAAGCGCGTGAATGATCTTCAGAAAGTCATGCATTTGATGGTTTCGGAAGATTCCAGTTCCGTCTCCGATAGGCTTGTTTACGCTAAAGATTTGATGGAAATCGCCATGAAACGGCTTCAGAAGGAGTTTTATCAAATCCTCTCGATGAATCGCGCGCATCTTGATCCGGAGTCTGTCTCCGCCCGATCCTCCCGCTGCTCCACCAGATCGAGCACCTCCGCTGATTTCAACGATGACGGCACTGTCGATGATGAAATCCAGGTGGTAGGCGATTCGATCTCTGAAGTTGAGCAAGTTTCTTCAATTGTGATGGAGGATTTGCGAACCATAGCCGAGTGCATGATCTCCTCTGGTTACGCTAAAGAGTGCGTCGGTATGTACAAAATAGTTCGAAAATCGATAATCGATGAAGGTGTGTATCGCCTCGGACTCGAGAAATTGAGCCCTTCGCGAATCAACAAGATGGACTGGGAAGTGCTCGAGCTTAAAATCAAGAACTGGTTGGATTCAATTAAGCTCGCGATTAGAACGTTGTTCACTGGCGAACGAATCCTCTGCGATCACGTCTTCGCGTCGTCTGAATCAATCAGAGAATCCTGTTTTGCTGATATATCCAGAGACGGTGCTCTGATTCTGTTAGGATTCCCGGAACTTGTTGCTAAGAGCAAGAAATCGCCGGAAAAAATGTTCCGTGTTCTCGATATGTACTCATCGATCGCCGAGAATTGGCCGGAAATCGAATCGATTTTCTCCTCGGAGTCCACATCTGCAGTTCGATCGCAAGCCCTAACCTCACTTGCGAAACTAGCCGAGTTGGTCCGTGCAATAGTAATGGATCTCGAACTGTCAATTCAGAAGAATTCGTCCAAATCGCCAGTCGCTGGCGGTGGCGTTCATTTTGTGACGCTTCTCTCGATGAATTACCTCACTTTCCTCGCCGATTATAGCACCGCTTTGACGGAAATTTTCGCCGACTGGATTCCACCAGAGAAATCCTCTCTCGATCAAATCGTATTCGGCAATCCAGAATCCGACGACAATTCGACTAATTCCACTAGAGATTCCGCTAGAGATTCTGCGATTTCTTTACGCATGGGATGGCTAATTCTAGTCCTCGTCTGCAAGCTTGATAACAAAGCAAAGCGCTACAAAGACGTTTCACTTTCATATCTATTCCTCGCTAATAATCTCCAATACATCGTCTCCAAAGTCCGATCGTCGAATCTTCAATACCTTCTCGGCGACGAGTGGATCACGAAGCACGAGGCCAAAGTGAGGCAATTCGCCGCCAAATACGAGTCGCTGGCCTGGGGCAGAGTCTTCGCATCATTGCCGGAGGATCCGACGGAGAAATTTTCACAGGAAGATACGAAGGAAATCTTCCGCAACTTCAATATGGCGTTCCAAGAAACGCATCGCAAACAGAAGTCCTGCTTCATTTCGGATCCAAAGCTTCGAGACGAAGTTAAATTATCAATCGGAACGAAGCTTGTGTCGTTCTATCAAGAATTTTACAGAGCGCAAAAAGCTTACGCCGGTGGCAACGAAAGGCCGTACATCAGATTTTCGCCGGAAGACGTCGGTAACTACATATCGGATCTCTACTTCGAGCCGACCGATTGGGCCAGCGTTTCGACCTCCTCACCGTCGTCGACCTCGTCCTCTCACAGGCGGGAAGCGGGGCCCCGT 1944 48.82 MPRKGMRSLLFQWSLSPSNSISRYSISSPSRSPALTPRRNFNEAMIEQTVESAAAIIMKWNPDSSTYAKVTSMFYEDKREVMQFIKRVNDLQKVMHLMVSEDSSSVSDRLVYAKDLMEIAMKRLQKEFYQILSMNRAHLDPESVSARSSRCSTRSSTSADFNDDGTVDDEIQVVGDSISEVEQVSSIVMEDLRTIAECMISSGYAKECVGMYKIVRKSIIDEGVYRLGLEKLSPSRINKMDWEVLELKIKNWLDSIKLAIRTLFTGERILCDHVFASSESIRESCFADISRDGALILLGFPELVAKSKKSPEKMFRVLDMYSSIAENWPEIESIFSSESTSAVRSQALTSLAKLAELVRAIVMDLELSIQKNSSKSPVAGGGVHFVTLLSMNYLTFLADYSTALTEIFADWIPPEKSSLDQIVFGNPESDDNSTNSTRDSARDSAISLRMGWLILVLVCKLDNKAKRYKDVSLSYLFLANNLQYIVSKVRSSNLQYLLGDEWITKHEAKVRQFAAKYESLAWGRVFASLPEDPTEKFSQEDTKEIFRNFNMAFQETHRKQKSCFISDPKLRDEVKLSIGTKLVSFYQEFYRAQKAYAGGNERPYIRFSPEDVGNYISDLYFEPTDWASVSTSSPSSTSSSHRREAGPR 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18484947 18486890 - MC05g1439 Mch5g1815 689234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1815 648 FunFam Exocyst subunit Exo70 family protein 67 627 - -
Mch5g1815 648 MobiDBLite consensus disorder prediction 145 162 - -
Mch5g1815 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 621 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch5g1815 648 Gene3D Exocyst complex component Exo70 56 625 - -
Mch5g1815 648 MobiDBLite consensus disorder prediction 143 163 - -
Mch5g1815 648 SUPERFAMILY Cullin repeat-like 53 620 IPR016159 -
Mch5g1815 648 Pfam Exocyst complex component Exo70 N-terminal 49 133 - -
Mch5g1815 648 MobiDBLite consensus disorder prediction 626 648 - -
Mch5g1815 648 Pfam Exo70 exocyst complex subunit C-terminal 250 618 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0755 Mch-Chr1:11350685 Mch5g1815 Mch-Chr5:18484947 9.67E-132 dispersed
Mch2g0943 Mch-Chr2:6345832 Mch5g1815 Mch-Chr5:18484947 6.15E-209 dispersed
Mch3g0389 Mch-Chr3:6772817 Mch5g1815 Mch-Chr5:18484947 2.33E-186 dispersed
Mch5g1815 Mch-Chr5:18484947 Mch9g1604 Mch-Chr9:18202377 4.65E-172 dispersed
Mch5g1814 Mch-Chr5:18477719 Mch5g1815 Mch-Chr5:18484947 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1815 K07195 - csv:101208543 1043.11