Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g1847 AATGGAATCCTTTTAGGTAATGGTTCTTTTGCAGTCCAATCACAAGAGAACGCTGTAGGCAGGCCTGGATTTCAGAATACCATTTTGAGTCGCAACTTTCAAGAATTTCGTTGCCTTGCCCCCGATCCATCACCGAGTAACATAGCCTCAAGTTCCAGTTTTCTCACCTCGTCTTCTAATGCGAGCCACGAGGAAGATTATCTGGAAGATTGCGATTTTTCTGATGCTGTTTTGAGGTTCATAAATCAGATTCTCATGGAAGAAGATATGGAGGACAAGACTTGCATGCTTCAAGACTCTTTGGATCTTCAAGCCGCAGAGAAATCATTCTACGATGTTCTTGGAAAAAAGTATCCTCCTTCCCCAGAACCAAATAGATCTCTGGCTATTCAATACAGTGATAGCTTCAATGGAGAGCTTTGTGGAGATAGTAGTAATTATCTGAATAGTTACAATAATACTTCTTATTCTGGTGATGATAACCCGTTTGAAACTCTAGATGTATTTCAAATCAGAAGCACTTTAGGTGATACCATTTCTCCATCATCTAATAGCTCCTCAAATAGTATAATTAGTGGGGTGGATGGGTTGGTGGACTTCTCGAATAATACAATTCAAGTCCCTGAGTCTAATAACAGAAGCCAATCTATTTGGCAATTCCAAAAGGGGTTTGAAGAGGCAAGCAAATTTTTACCTGGTGGAAACGACTTGTGCCTTGATTTTGACGTAAATGGGTCAGTAACTCAGGGCCCAGACGAGGGAACTAGCCAGATATATGTGAAGGCAAAAAGAAAGGATCAGAGGAATATTTTGTCACTTGAGTCACGAGTAAGAAAGAATCCTCATGATGAGGATGGAGATTTGGAAGAAGAGAGAAGCAGCAAGCAAGCAGCTGTATTTACAGAGTCGACCCTGCGATCTAAGATGTTTGATATTGTGTTGCTTTGTAGTGCAGGGGAGGGACATGACCGGTTAGCTTCATTTCGGCAGGAATTACAGAATGCAAAAATCAGAAGCATGATGCAGACTGGGCAACTAAAACAATCTAGTGGAGGTAGGGGTCGTCGGAAGAAGCAAAGTGGGAAAAAGGAGGTGGTGGATTTGAGAACTCTTCTAATTAGCTGTGCTCAAGCTGTTGCAGCTGATGACCATAGGAATGCCACTGAGCTTCTAAAGCAGATCAGGCAACATGCTTCTCCTTTTGGGGATGGAAATCAGAGGTTGGCTAGTTGTTTTGCAGATGGTCTGGAGGCACGCTTGGCAGGTACTGGTAGCCAGATTTATAAAGGTCTAATTAATAAAAGAACATCTGCGGCTGATGTATTGAAAGCTTACCACCTGTACCTTGCTGCATGCCCATTTAGGAAGATCTCTAATTTTACTTCAAACAGGACGATAATGAATGCTGCAGAGAATGCAACTAGGCTTCATGTCATAGATTTTGGTATCCTGTACGGTTTCCAGTGGCCTACTTTAATACAGAGACTATCGTGGAGAAAAGGAGGACCTCCAAAGCTTCGAATTACTGGAATAGAATTTCCCCAGCCTGGATTTCGTCCAGCAGAGAGAGTTGAGGAGACAGGCCGTCGCTTGGCAACCTATGCTGAGAGTTTCAATGTGCCATTTGAGTATAATGCTATAGCAAAAAAATGGGAAACTATTACAGTTGAAGACCTCAATATCGATAAGGATGAGTTCCTAGTTGTTAACTGTTTGTATCGAGCTAAAAATTTGCTTGATGAGAGTGTTTCCACAGAGAGTCCTAGGAATACTGTTCTTAGATTGATACACAAAATTAATCCTAACTTATTCATCCATGGCGTTGTCAATGGGGCATACAATGCTCCTTTCTTTGTTACTCGATTTCGAGAGGCTTTGTTTCACTTTTCTGCTATCTTTGATATGCTTGAAACCATTGTACCTCGTGAGGATTGGGAGAGAATGCTGTTGGAGAAAGAGATCTTTGGCAGGGAGGCTTTAAATGTTATAGCATGTGAGGGATGGGAGAGAGTGGAAAGACCAGAAACATACAAGCAATGGCAATTCCGGATCATGAGGGCTGGATTCGTGCAACTGCCTATTGGTCCTGAGATTTTCGAGAGAGCAGTTGACAAGGTGCGGTCAAGTTACCACCGAGATTTTTTGATTGATGAAGATAGTAGATGGATACTGCAGGGATGGAAAGGTCGAATTATATATGCCATCTCCGCTTGGAGACCTGCTATAGAA 2229 42.22 NGILLGNGSFAVQSQENAVGRPGFQNTILSRNFQEFRCLAPDPSPSNIASSSSFLTSSSNASHEEDYLEDCDFSDAVLRFINQILMEEDMEDKTCMLQDSLDLQAAEKSFYDVLGKKYPPSPEPNRSLAIQYSDSFNGELCGDSSNYLNSYNNTSYSGDDNPFETLDVFQIRSTLGDTISPSSNSSSNSIISGVDGLVDFSNNTIQVPESNNRSQSIWQFQKGFEEASKFLPGGNDLCLDFDVNGSVTQGPDEGTSQIYVKAKRKDQRNILSLESRVRKNPHDEDGDLEEERSSKQAAVFTESTLRSKMFDIVLLCSAGEGHDRLASFRQELQNAKIRSMMQTGQLKQSSGGRGRRKKQSGKKEVVDLRTLLISCAQAVAADDHRNATELLKQIRQHASPFGDGNQRLASCFADGLEARLAGTGSQIYKGLINKRTSAADVLKAYHLYLAACPFRKISNFTSNRTIMNAAENATRLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGFRPAERVEETGRRLATYAESFNVPFEYNAIAKKWETITVEDLNIDKDEFLVVNCLYRAKNLLDESVSTESPRNTVLRLIHKINPNLFIHGVVNGAYNAPFFVTRFREALFHFSAIFDMLETIVPREDWERMLLEKEIFGREALNVIACEGWERVERPETYKQWQFRIMRAGFVQLPIGPEIFERAVDKVRSSYHRDFLIDEDSRWILQGWKGRIIYAISAWRPAIE 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18703155 18705383 + MC05g1470 Mch5g1847 689266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g1847 743 MobiDBLite consensus disorder prediction 274 295 - -
Mch5g1847 743 ProSiteProfiles GRAS family profile. 359 739 IPR005202 -
Mch5g1847 743 Pfam GRAS domain family 368 739 IPR005202 -
Mch5g1847 743 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 345 738 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Mch5g1847 743 MobiDBLite consensus disorder prediction 340 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1496 Mch-Chr1:16458092 Mch5g1847 Mch-Chr5:18703155 2.34E-48 dispersed
Mch5g1847 Mch-Chr5:18703155 Mch8g2309 Mch-Chr8:26277069 4.04E-49 dispersed
Mch10g0967 Mch-Chr10:6898036 Mch5g1847 Mch-Chr5:18703155 2.59E-43 transposed
Mch10g1457 Mch-Chr10:14420047 Mch5g1847 Mch-Chr5:18703155 1.84E-42 transposed
Mch11g1412 Mch-Chr11:10461550 Mch5g1847 Mch-Chr5:18703155 4.63E-64 transposed
Mch1g1701 Mch-Chr1:17686047 Mch5g1847 Mch-Chr5:18703155 6.53E-63 transposed
Mch2g0480 Mch-Chr2:3477411 Mch5g1847 Mch-Chr5:18703155 1.34E-70 transposed
Mch4g0210 Mch-Chr4:1375170 Mch5g1847 Mch-Chr5:18703155 5.20E-37 transposed
Mch6g0766 Mch-Chr6:5285835 Mch5g1847 Mch-Chr5:18703155 1.18E-50 transposed
Mch6g2436 Mch-Chr6:26265841 Mch5g1847 Mch-Chr5:18703155 1.27E-37 transposed
Mch9g0222 Mch-Chr9:1668858 Mch5g1847 Mch-Chr5:18703155 5.58E-16 transposed
Mch2g0888 Mch-Chr2:6044081 Mch5g1847 Mch-Chr5:18703155 3.90E-196 wgd
Mch3g0228 Mch-Chr3:3043057 Mch5g1847 Mch-Chr5:18703155 4.98E-185 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43461 PF03514 GRAS 8.50E-119 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g1847 K27753 - csv:101205887 1272.69