Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g2014 | ATGGTTTCGTCTCAGTTTTGTGGCTTGACCAACACTGGCAAGAATAACCTGATTCGAAGCCAGCTTCTTTTTCCTACAAACACCTCCGATACTGCACCTCTGGATTCTGTTAATTTGGATTTCTCTGACTTATTTGGCTCCATACCGCTTCATGCCTCAACTGAAGTGGAGGCTATTGATGTAGATCTTCATGTCTACCAGGAAGATTCACGTGAGCTTATTTATGATGATCCTGAAGTTATTTACAACCGGTCTCATTCTTTGGTCGGTCCCTCTTCTTGTGCAAGTAAATCTCTTAAGCTAAGCAATCTTACTATTACCGAGACCGAGGATTCAGGGGAATTAGTTGCCTGTATCAGCAAAGAGACCAACAGAAAACTTCTAGAACCTCCTAATGATTCTTTTACTGATACAATAATTGAAGGTGTTGATAGAAGTTACATGAAAGTTGAGAGTGTAGGTATTGACGACTTTGAAGTTCTGAAGGTTGTTGGGCAGGGTGCATTTGCGAGGGTTTATCAGGTGAGGCGAAAAGGTACGTTAGAGATATATGCCATGAAGGTCATGCGAAAGGACAAGATAATGGAGAAGAATCATGTTGAATACATGAAAGCTGAGAGGGATATTTTGACAAAAACTGACCATCCGTTTATTGTCCAGCTAAGATATTCATTCCAAACAAAATATAGGCTATATCTCGTTCTGGATTTTGTAAATGGTGGCCATCTTTTCTTTCAGCTTTACCACCATGGGCTTTTCAGAGAAGATCTTGCTCGTATTTATGCTGCCGAGATTGTTTCGGCAGTTTCTCACCTCCATTCAAATGGCATAATGCACAGAGATTTAAAACCTGAAAATATTTTGATGGATGACCTTGGCCATGTTATGTTGACTGATTTCGGTCTGGCAAAACAGTTTGAAGAGAATACAAGATCGAATTCTATGTGTGGAACTCTGGACTATATGTCACCGGAGATAGTTCTTGGGAAAGGTCATGACAAGGCTGCAGATTGGTGGAGTGTAGGAATACTGTTATTTGAAATGCTTACTGGGAAGCCTCCTTTTACTGGGAATCGGGAAAAAGTCCAGCAAAAGATAGTGAAGGACAAGATCAAGCTGCCGGCATTTTTATCTAGTGAAGCACATTCTCTCTTAAAAGGGCTGCTTCAAAAGGACGCGAGAAAGCGATTGGGCAGTGGGGCTATGGGAAGTGAGGAAATCAAGCGCCACAAGTGGTTCAAGCCAATCAATTGGAAGAAATTGGAGAAGCGGGAAATCCAACCAAGCTTTCGGCCTGAAGTGGCCGGGAAACACTGCGTTGCCAACTTTGAGAAGCGGTGGACTGAAATGCCACTTGTTGATTCTCCGGTAGCCAGCCCTAAAACCGAAGGGAATCCCTTCACCGGCTTCAGCTATGTCAAACCT | 1425 | 42.74 | MVSSQFCGLTNTGKNNLIRSQLLFPTNTSDTAPLDSVNLDFSDLFGSIPLHASTEVEAIDVDLHVYQEDSRELIYDDPEVIYNRSHSLVGPSSCASKSLKLSNLTITETEDSGELVACISKETNRKLLEPPNDSFTDTIIEGVDRSYMKVESVGIDDFEVLKVVGQGAFARVYQVRRKGTLEIYAMKVMRKDKIMEKNHVEYMKAERDILTKTDHPFIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHHGLFREDLARIYAAEIVSAVSHLHSNGIMHRDLKPENILMDDLGHVMLTDFGLAKQFEENTRSNSMCGTLDYMSPEIVLGKGHDKAADWWSVGILLFEMLTGKPPFTGNREKVQQKIVKDKIKLPAFLSSEAHSLLKGLLQKDARKRLGSGAMGSEEIKRHKWFKPINWKKLEKREIQPSFRPEVAGKHCVANFEKRWTEMPLVDSPVASPKTEGNPFTGFSYVKP | 475 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 19778079 | 19781425 | - | MC05g1603 | Mch5g2014 | 689433 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g2014 | 475 | ProSitePatterns | Protein kinases ATP-binding region signature. | 164 | 187 | IPR017441 | GO:0005524(InterPro) | |
Mch5g2014 | 475 | SUPERFAMILY | Protein kinase-like (PK-like) | 155 | 464 | IPR011009 | - | |
Mch5g2014 | 475 | Gene3D | Phosphorylase Kinase; domain 1 | 155 | 454 | - | - | |
Mch5g2014 | 475 | FunFam | Non-specific serine/threonine protein kinase | 155 | 261 | - | - | |
Mch5g2014 | 475 | CDD | STKc_AGC | 164 | 413 | IPR045270 | GO:0004674(InterPro)|GO:0005524(InterPro) | |
Mch5g2014 | 475 | Gene3D | Transferase(Phosphotransferase) domain 1 | 238 | 432 | - | - | |
Mch5g2014 | 475 | PANTHER | RIBOSOMAL PROTEIN S6 KINASE | 125 | 474 | - | - | |
Mch5g2014 | 475 | Pfam | Protein kinase domain | 158 | 413 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch5g2014 | 475 | MobiDBLite | consensus disorder prediction | 454 | 475 | - | - | |
Mch5g2014 | 475 | Pfam | Protein kinase C terminal domain | 435 | 472 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch5g2014 | 475 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 414 | 475 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch5g2014 | 475 | SMART | serkin_6 | 158 | 413 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch5g2014 | 475 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 277 | 289 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch5g2014 | 475 | FunFam | Non-specific serine/threonine protein kinase | 238 | 432 | - | - | |
Mch5g2014 | 475 | SMART | pkinase_C_6 | 414 | 474 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch5g2014 | 475 | ProSiteProfiles | Protein kinase domain profile. | 158 | 413 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch5g2014 | Mch-Chr5:19778079 | Mch6g0191 | Mch-Chr6:1276298 | 7.13E-163 | dispersed | |
Mch5g2014 | Mch-Chr5:19778079 | Mch4g0368 | Mch-Chr4:2323977 | 1.38E-58 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77447 | PF00069 | Pkinase | 1.10E-73 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch5g2014 | K04688 | - | mdm:103423523 | 711.835 |