Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0007 ATGGATCCAGAAGCCCTCTCCGGCACTCTGTTCAAATGGGATCCTCGAGGCCTCCCACCACCACTACAGCCCTACTCCCTTGGGCGACTGGGAGGACTGGAGGAGCTGTTCCAGGCTTACGGTATCAGGTACTACACCGCCGCTAAAATTGCGGAACTTGGATTCACCGTCAGCACCCTCCTCGACATGAAAGACGAAGAGTTGGAGGACATGATGAACAGCCTCTCTCACATTTTTCGCTGGGACCTTCTCGTGGGAGAGAGGTACGGAATCAAGGCAGCGGTGAGAGCCGAGCGCAGACGCCTAGATGACGAGATCGACTCCTCCAGGCGCCGTCACCTCTTCTCCAACGATACCACTACCAACGTCCTCGACGCTCTTTCTCAGGAAGGTCTATCGGAAGAGCCGGTGCAGCAGCAGGAGAAGGAGGTGGTGGGGAGCGGAGGAGGAGGATCATGGGAGGCTGTTGCAGTTGCGGAGAGGAAGCTGAAGCAGCGGAGGAGAAACGGAAAGAAGAAGCAGCAGCAGGTGATAGAGGAGGATCACGACGAAAACGACGGAGCTGGGGAGGAGGATCAGGACAATATAGAAGTGAACGAGAGACAGCGGGAGCATCCATTTATTGTAACCGAGCCAGGGGAGGTTGCACGGGGAAAGAAGAACGGCCTCGACTACCTGTTCCACCTCTATGAGCAGTGCCGTGAATTTTTGATTCAAGTGCAGAACATTGCCAAGGAACGAGGTGAAAAATGCCCCACCAAGGTGACGAACCAGGTGTTCAGATATGCTAAGAAGGCGGGAGCAAGTTATATAAACAAGCCGAAAATGAGACACTACGTGCACTGCTATGCGCTGCATTGTCTGAACGAGGAGGAGTCGAATGCATTGAGGAGAGTTTTCAAAGAGAGGGGTGAAAATGTGGGAGCTTGGCGACAGGCATGCTACAAGCCTCTGGTGGCCATAGCGGGTGCCCAAGGTTGGGACATTGATGCCATTTTCAACGCACATCCACGCCTCGCCATTTGGTATGTGCCTACCAAACTCCGTCAACTCTGCCATGCCGAGCGCAACAGCGCCACCGCCTCAACCTCCGCCGATCACCTCCCTTTTTAA 1113 54.63 MDPEALSGTLFKWDPRGLPPPLQPYSLGRLGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIDSSRRRHLFSNDTTTNVLDALSQEGLSEEPVQQQEKEVVGSGGGGSWEAVAVAERKLKQRRRNGKKKQQQVIEEDHDENDGAGEEDQDNIEVNERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLNEEESNALRRVFKERGENVGAWRQACYKPLVAIAGAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNSATASTSADHLPF 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 63546 65762 + MC06g0006 Mch6g0007 689454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0007 370 Gene3D Protein LEAFY 198 366 IPR038276 -
Mch6g0007 370 Coils Coil 92 112 - -
Mch6g0007 370 PANTHER PROTEIN LEAFY 30 365 IPR002910 GO:0003677(InterPro)|GO:0006355(InterPro)
Mch6g0007 370 MobiDBLite consensus disorder prediction 164 204 - -
Mch6g0007 370 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 199 360 IPR035209 GO:0003677(InterPro)
Mch6g0007 370 Pfam Floricaula / Leafy protein SAM domain 29 105 IPR035079 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43471 PF17538 C_LFY_FLO 1.20E-106 CL0123 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0007 - - - 0.0