Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0021 ATGGCTCTCTCCAAAGATGTCCAGCAATCTCTCATCCCGAGCTTTCTATACTCATCTTCCCGTACACTGCGTAGTACGGAATCGACGCGATCCAGTTATGGCAAGAGCTTCCCAATTCCAGCTCCAAAGGAGAAGATTAAGATGCATTCACCGGCCTTCTACGCAGCATGCACAGCAGGCGGAATTTTGAGCTGTGGACTCACCCACATGGCTGTCACCCCCCTCGATCTCGTCAAGTGCAATATGCAGATCGACCCCACAAAGTACAAGAATATCTCGTCGGGTTTTGGAATTCTGCTCAAGGAGCAGGGAGCGAGAGGGTTCTTCCGGGGGTGGGTGCCGACCTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAGTTCTATTCTGACAAGGTTGGAGCAGAGAATGCAGCCAAGTACAAAACTTTGTTATACCTTGCTGGTTCGGCATCTGCCGAAGTAATTGCAGACGTTGCTCTCTGCCCCATGGAGGCCGTCAAAGTTCGCGTCCAAACTCAACCTGGTTTTGCTAGGGGTTTGGCAGATGGGTTCGCAAAGTTTGTAAAATCTGAGGGTGTTTCTGGGCTCTACAAAGGTCTGGTTCCTCTTTGGGGACGTCAGATACCATATACCATGATGAAATTTGCATCTTTCGAGACAATTGTAGAGATGCTGTACAAGTATGCCATCCCAAGGCCTAAAGAGCAGTGTAGCAAATCTCTGCAGCTTGGAGTGAGCTTTGCCGGGGGAGTGGCGGGCGTCCTCTGTGCTGTGGTCTCACACCCGGCTGATAATCTTGTCTCTTTTCTCAACAATGCCAAGGGAGCAACCGCCGGAGATGCAGTCAGGCAACTAGGTCTATGGGGTCTTTTTACTCGTGGGCTTCCCCTTCGGATTGTTATGATTGGAACCCTTACTGGGTCTCAATGGGGAATATATGACGCATTCAAAGTTTTCGTCGGACTG 993 50.05 MALSKDVQQSLIPSFLYSSSRTLRSTESTRSSYGKSFPIPAPKEKIKMHSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPTKYKNISSGFGILLKEQGARGFFRGWVPTLLGYSAQGACKFGFYEFFKKFYSDKVGAENAAKYKTLLYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLADGFAKFVKSEGVSGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKEQCSKSLQLGVSFAGGVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGL 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 140791 142299 + MC06g0019 Mch6g0021 689468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0021 331 SUPERFAMILY Mitochondrial carrier 54 324 IPR023395 -
Mch6g0021 331 Pfam Mitochondrial carrier protein 150 237 IPR018108 -
Mch6g0021 331 Pfam Mitochondrial carrier protein 54 140 IPR018108 -
Mch6g0021 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 149 233 IPR018108 -
Mch6g0021 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 52 136 IPR018108 -
Mch6g0021 331 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 37 331 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Mch6g0021 331 FunFam Phosphate carrier protein, mitochondrial 52 329 - -
Mch6g0021 331 Gene3D Mitochondrial carrier domain 52 329 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1596 Mch-Chr4:19201590 Mch6g0021 Mch-Chr6:140791 1.44E-194 dispersed
Mch6g0021 Mch-Chr6:140791 Mch7g0293 Mch-Chr7:3901641 1.86E-13 dispersed
Mch6g2392 Mch-Chr6:25839533 Mch6g0021 Mch-Chr6:140791 2.86E-08 transposed
Mch6g0021 Mch-Chr6:140791 Mch8g1355 Mch-Chr8:10052420 1.48E-181 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0021 K15102 - csv:101220423 561.222