Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0109 ATGGAGAGTCTTGCTCTTGTTGAGTTGCTATTTCATCCAATTTGCTCAACAGCTTTCATCCTCTTCCTCGTCTTCCTCCTCCAAAAATGGCTAAAATCTTCCATTTCAGACCAATCCTCGCCCCCATCTCCGCCAAAAATCCCCATTTTCGGCCACCTTCTGAACCTGGGTTCCCTTCCCCACATCACTCTCCAAGCCTACGCCCGGCGCCATGGCCCTCTGTTTCTCCTTCACATCGGCAGCAAGCCCACCATCGTGGCCTCTTCCGCCGAGATGGCTCGAGAAATCATGAAGACCCACGATCTGATCTTCGCCGACCGCCCCAAATCAAGCATAAGCGACAAGCTTCTCTACGACTCCAGAGATATAGCCGCATCCCCTTGCGGCGAATACTGGAGGCAGATGAAGAGCATTGCAGTGCTTCATCTATTGAGCAACAAAAGGGTTCACTCCTTTCGCTCCGTCAGAGAAGAGGAAGTCAAACTGATGATCCAAAACATCCGACAGAATCCGGCGTCGGTGAATTTAAGCCACGAATTCTCTAGACTGACGAATGATGTGATTTGCAGGGTGGCTTTAGGGAGGAAGTACGGGGCCGTGGCAGGGGAAGATAAGTTCCGGGATATTCTTCCCCAATTTGTGAAATTGTTGGGGAGTTTCAGTGTTAGAGACTTCGTTCCGTGGCTGGGTTGGATTGATGGGATCAGTGGGATGGATGCCAAGGCAAAGAAGGTAGCCAAAGAACTTGATGATTTCGTTGACAGAGTGATTCAAGATCATGTCCATGCAGATTACAATCCCGAGGAGCAGAGTCAGGACTTGGTGGATGTGCTGCTTTCAATTCAGAGACAAGATTCCATCGGTTTTCCCCCCCTTGAGATGAAAAGCATAAAAGCTTTAATCTTGGAGGTACAGACACAATATACACGGTGTTGGAGTGGACAATGTCAGAACTTTTGA 960 49.06 MESLALVELLFHPICSTAFILFLVFLLQKWLKSSISDQSSPPSPPKIPIFGHLLNLGSLPHITLQAYARRHGPLFLLHIGSKPTIVASSAEMAREIMKTHDLIFADRPKSSISDKLLYDSRDIAASPCGEYWRQMKSIAVLHLLSNKRVHSFRSVREEEVKLMIQNIRQNPASVNLSHEFSRLTNDVICRVALGRKYGAVAGEDKFRDILPQFVKLLGSFSVRDFVPWLGWIDGISGMDAKAKKVAKELDDFVDRVIQDHVHADYNPEEQSQDLVDVLLSIQRQDSIGFPPLEMKSIKALILEVQTQYTRCWSGQCQNF 319
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 641193 643536 - MC06g_new0017 Mch6g0109 689556
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0109 319 Gene3D Cytochrome P450 35 304 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0109 319 Pfam Cytochrome P450 41 303 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0109 319 SUPERFAMILY Cytochrome P450 40 296 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0109 319 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0109 319 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0109 319 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0109 319 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 19 301 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0109 Mch-Chr6:641193 Mch3g1407 Mch-Chr3:16559625 1.65E-67 dispersed
Mch6g0107 Mch-Chr6:635683 Mch6g0109 Mch-Chr6:641193 1.28E-48 proximal
Mch6g0109 Mch-Chr6:641193 Mch6g0110 Mch-Chr6:645144 5.09E-136 tandem
Mch3g1399 Mch-Chr3:16503374 Mch6g0109 Mch-Chr6:641193 3.12E-59 wgd
Mch6g0109 Mch-Chr6:641193 Mch9g2304 Mch-Chr9:23226720 2.29E-57 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0109 - - - 0.0