Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch6g0109 | ATGGAGAGTCTTGCTCTTGTTGAGTTGCTATTTCATCCAATTTGCTCAACAGCTTTCATCCTCTTCCTCGTCTTCCTCCTCCAAAAATGGCTAAAATCTTCCATTTCAGACCAATCCTCGCCCCCATCTCCGCCAAAAATCCCCATTTTCGGCCACCTTCTGAACCTGGGTTCCCTTCCCCACATCACTCTCCAAGCCTACGCCCGGCGCCATGGCCCTCTGTTTCTCCTTCACATCGGCAGCAAGCCCACCATCGTGGCCTCTTCCGCCGAGATGGCTCGAGAAATCATGAAGACCCACGATCTGATCTTCGCCGACCGCCCCAAATCAAGCATAAGCGACAAGCTTCTCTACGACTCCAGAGATATAGCCGCATCCCCTTGCGGCGAATACTGGAGGCAGATGAAGAGCATTGCAGTGCTTCATCTATTGAGCAACAAAAGGGTTCACTCCTTTCGCTCCGTCAGAGAAGAGGAAGTCAAACTGATGATCCAAAACATCCGACAGAATCCGGCGTCGGTGAATTTAAGCCACGAATTCTCTAGACTGACGAATGATGTGATTTGCAGGGTGGCTTTAGGGAGGAAGTACGGGGCCGTGGCAGGGGAAGATAAGTTCCGGGATATTCTTCCCCAATTTGTGAAATTGTTGGGGAGTTTCAGTGTTAGAGACTTCGTTCCGTGGCTGGGTTGGATTGATGGGATCAGTGGGATGGATGCCAAGGCAAAGAAGGTAGCCAAAGAACTTGATGATTTCGTTGACAGAGTGATTCAAGATCATGTCCATGCAGATTACAATCCCGAGGAGCAGAGTCAGGACTTGGTGGATGTGCTGCTTTCAATTCAGAGACAAGATTCCATCGGTTTTCCCCCCCTTGAGATGAAAAGCATAAAAGCTTTAATCTTGGAGGTACAGACACAATATACACGGTGTTGGAGTGGACAATGTCAGAACTTTTGA | 960 | 49.06 | MESLALVELLFHPICSTAFILFLVFLLQKWLKSSISDQSSPPSPPKIPIFGHLLNLGSLPHITLQAYARRHGPLFLLHIGSKPTIVASSAEMAREIMKTHDLIFADRPKSSISDKLLYDSRDIAASPCGEYWRQMKSIAVLHLLSNKRVHSFRSVREEEVKLMIQNIRQNPASVNLSHEFSRLTNDVICRVALGRKYGAVAGEDKFRDILPQFVKLLGSFSVRDFVPWLGWIDGISGMDAKAKKVAKELDDFVDRVIQDHVHADYNPEEQSQDLVDVLLSIQRQDSIGFPPLEMKSIKALILEVQTQYTRCWSGQCQNF | 319 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 641193 | 643536 | - | MC06g_new0017 | Mch6g0109 | 689556 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch6g0109 | 319 | Gene3D | Cytochrome P450 | 35 | 304 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0109 | 319 | Pfam | Cytochrome P450 | 41 | 303 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0109 | 319 | SUPERFAMILY | Cytochrome P450 | 40 | 296 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0109 | 319 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0109 | 319 | PRINTS | E-class P450 group I signature | 92 | 113 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0109 | 319 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g0109 | 319 | PANTHER | CYTOCHROME P450 FAMILY 71 PROTEIN | 19 | 301 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch6g0109 | Mch-Chr6:641193 | Mch3g1407 | Mch-Chr3:16559625 | 1.65E-67 | dispersed | |
| Mch6g0107 | Mch-Chr6:635683 | Mch6g0109 | Mch-Chr6:641193 | 1.28E-48 | proximal | |
| Mch6g0109 | Mch-Chr6:641193 | Mch6g0110 | Mch-Chr6:645144 | 5.09E-136 | tandem | |
| Mch3g1399 | Mch-Chr3:16503374 | Mch6g0109 | Mch-Chr6:641193 | 3.12E-59 | wgd | |
| Mch6g0109 | Mch-Chr6:641193 | Mch9g2304 | Mch-Chr9:23226720 | 2.29E-57 | wgd |
Pathway information