Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0110 ATGGGGTCTCTTCTTCTTTGGTTGCTATGTAGTCCAATTACGTGCTTCACTGGTTTCATCATCTTCCTCCTCTTCCTCCTTCAAAAATGGTTCCCAAATTCAAATTCAAATTCACTTCCATCTCCACCAAAAATTCCCATTTTCGGACACCTTCTGAATCTGGGTTTGCATCCCCACATCACACTCCAAAGCTACGCTCGCCACCATGGCCCTCTGTTTCTCCTCCACCTCGGCAGCAGGCCCACCGCCGTCGTCTCCTCAGCCGAATTGGCCCGCGATGTCATGAAAACCCACGACCTGGTCTTTTCCAACCGACCCAAATCCTGCATTAGCCAAAAGATTCTCTACGGCGCCAGAGACATCGCCGCATCCCCTTACGGCGAGTACTGGAGGCAGATGAAGACTATTGGCGTGGTTCATCTCTTGAGCAACATAAGGGTCCAGTCATTTCGCTCTGTCAGAGAAGAAGAGGTCAAATTCATGATTCACAAGATCCAACAGAGTCCAATCTCGGTGAATTTGACCCAAATATTCTCTGAACTCACAAATGACATAGTTTGCAGAGTGGCGTTGGGGAGAAAATATGGGGTTGGAGAAGATGGGAAGAAATTTCGATGTCTTCTGCTGGAATTTGGGGAATTACTGGGGAGTTTCAGTGGAAGAGATTTCATCCCGTGGCTGGGTTGGATCGATGGAATTAGTGGATTGGACGCCAAAGCAGAGAGAGTAGCAAACGAAATCGATGCTTTCTTAAACAGAGTGATTGAAGATCATGTAGAAACGGGGGAAATTAGTGTCGATAAGCACAAGGATCTGGTGGATATTCTGCTTTCCATACAGAAACAAGACTCAATTGGTTTCCCCCTTGAAATGGACAGCATCAAAGCTTTGATCTTGGACATGTTTGCAGCAGGTACAGACACGACGTATACAGTGTTGGAGTGGGCAATGTCGCAACTTTTGAGACACCCAGAAGCAATGAAGAAACTGCAAACCGAGGTTAGAGAAACAGTAGGGGATCGTGAGAAATCATGTGTAAGTGAGGATGATTTAGAGAGGATGCATTATTTAAAGGCAGTAATCAAAGAAACGCTGCGACTACACCCACCGATCCCACTTCTCGTCCCTAGAGAATCGACCCAAGACATCAAATTAAGGGGCTATGATATCAAAGCTGGGAGTCGAGTGATAATCAATGCATGGGCCATTGGGAGAGACCCGGAGCTGTGGGAAGAAGCAGAGGAGTTTCGTCCAGAACGATTTCTAAACAGTTCGATCGATTTCAAGGGCCATGATTTTGAGTTAATCCCATTCGGTGCAGGGAGAAGAGGGTGTCCTGGAGTTGTGTTTGCAATGGTAATTAATGAGATCGCTTTAGCAAATCTAGTACATAAATTCGAGTGGACATTGCCGAGTGGAGCAAACGCAGAGGATTTGGATATGACGATGGTGTCTGCGTTAACAATTCATAGGAAGTTTCCACTTGTAGCTACCGCAACTCCTTACTAG 1509 46.26 MGSLLLWLLCSPITCFTGFIIFLLFLLQKWFPNSNSNSLPSPPKIPIFGHLLNLGLHPHITLQSYARHHGPLFLLHLGSRPTAVVSSAELARDVMKTHDLVFSNRPKSCISQKILYGARDIAASPYGEYWRQMKTIGVVHLLSNIRVQSFRSVREEEVKFMIHKIQQSPISVNLTQIFSELTNDIVCRVALGRKYGVGEDGKKFRCLLLEFGELLGSFSGRDFIPWLGWIDGISGLDAKAERVANEIDAFLNRVIEDHVETGEISVDKHKDLVDILLSIQKQDSIGFPLEMDSIKALILDMFAAGTDTTYTVLEWAMSQLLRHPEAMKKLQTEVRETVGDREKSCVSEDDLERMHYLKAVIKETLRLHPPIPLLVPRESTQDIKLRGYDIKAGSRVIINAWAIGRDPELWEEAEEFRPERFLNSSIDFKGHDFELIPFGAGRRGCPGVVFAMVINEIALANLVHKFEWTLPSGANAEDLDMTMVSALTIHRKFPLVATATPY 502
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 645144 646732 - MC06g_new0018 Mch6g0110 689557
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0110 502 CDD CYP71-like 69 495 - -
Mch6g0110 502 FunFam Cytochrome P450 83B1 26 498 - -
Mch6g0110 502 Pfam Cytochrome P450 40 488 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 Gene3D Cytochrome P450 29 496 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 SUPERFAMILY Cytochrome P450 40 501 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g0110 502 PANTHER CYTOCHROME P450 71B11-RELATED 23 498 IPR050193 -
Mch6g0110 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1399 Mch-Chr3:16503374 Mch6g0110 Mch-Chr6:645144 1.72E-150 dispersed
Mch3g1406 Mch-Chr3:16554593 Mch6g0110 Mch-Chr6:645144 6.96E-145 dispersed
Mch6g0107 Mch-Chr6:635683 Mch6g0110 Mch-Chr6:645144 1.24E-63 dispersed
Mch6g0110 Mch-Chr6:645144 Mch9g2304 Mch-Chr9:23226720 6.16E-134 dispersed
Mch6g1266 Mch-Chr6:10175055 Mch6g0110 Mch-Chr6:645144 5.92E-83 dispersed
Mch6g0108 Mch-Chr6:639045 Mch6g0110 Mch-Chr6:645144 1.61E-30 proximal
Mch6g0109 Mch-Chr6:641193 Mch6g0110 Mch-Chr6:645144 5.09E-136 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0110 - - - 0.0