Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0114 ATGAGGAACTTCTCCCTTTTCCCTCCTCCACGACACATCGGTCATCCAACTTTTCGATTGATTTCTGGCCCTGTTTTTGAGTTCATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTAACCGAGCTTTTATTAGGAGGGACCTTACGAAAGTACCTGCTGAATATGCGTCCACGGTGCTTGGACACACACGTGGCAGTTGGTTTTGCACTCGACATTGCTCGTGCTATGGAATGCCTGCACTCTCATGGGATCATTCACCGCGATCTGAAACCTGAGAACCTATTGTTGACTGCAGATCACAAAACAGTAAAATTAGCTGATTTTGGTTTGGCAAGAGAAGAGTCATTGACGGAGATGATGACTGCAGAGACGGGGACGTACCGTTGGATGGCTCCAGAGTTGTACAGCACCGTGACACTGAGGCAGGGGGAGAAGAAACATTACAACCATAAAGTGGATGCCTATAGCTTTGCCATTGTGTTATGGGAACTGCTACATAACAAGTTGCCATTTGAAGGCATGTCTAATCTTCAGGCAGCATATGCAGCTGCTTTTAAGAATGTGAGGCCTAGCGCGGAGAATCTCCCGGAGGAACTAGCCGATGTTCTAACATCGTGCTGGCAGGAGGATGCAAATGCTCGTCCAAATTTCACCCAAATTATCCACATGTTACTCAATTACCTTTACACCATATCACCCCCCGAGCCCGTGATTCCTTACCGAGTTTTCACTTCTGAGAATGCGGTGTTTCCTCCCGAGTCTCCTGGAACAAGCTCGCTGATGGCAGTCCGTGATGATTCAGGGGACACCCCAAAGGCAAAAATGGAAAATAAGCCCAGAGGTTGTTTCTTCTGCTCCAATGACTGTTACTAA 876 47.6 MRNFSLFPPPRHIGHPTFRLISGPVFEFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLDTHVAVGFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEELADVLTSCWQEDANARPNFTQIIHMLLNYLYTISPPEPVIPYRVFTSENAVFPPESPGTSSLMAVRDDSGDTPKAKMENKPRGCFFCSNDCY 291
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 665767 668356 - MC06g_new0020 Mch6g0114 689561
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0114 291 MobiDBLite consensus disorder prediction 255 275 - -
Mch6g0114 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 85 97 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0114 291 Gene3D Transferase(Phosphotransferase) domain 1 18 232 - -
Mch6g0114 291 Pfam Protein tyrosine and serine/threonine kinase 25 225 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0114 291 FunFam serine/threonine-protein kinase HT1 46 245 - -
Mch6g0114 291 CDD STKc_MAP3K-like 28 225 - -
Mch6g0114 291 SMART serkin_6 7 229 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0114 291 PRINTS Tyrosine kinase catalytic domain signature 79 97 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0114 291 PRINTS Tyrosine kinase catalytic domain signature 196 218 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0114 291 PRINTS Tyrosine kinase catalytic domain signature 41 54 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0114 291 PRINTS Tyrosine kinase catalytic domain signature 153 175 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0114 291 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0114 291 PANTHER SERINE-THREONINE PROTEIN KINASE 26 226 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch6g0114 291 SUPERFAMILY Protein kinase-like (PK-like) 26 254 IPR011009 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1998 Mch-Chr5:19693486 Mch6g0114 Mch-Chr6:665767 3.86E-107 dispersed
Mch6g0114 Mch-Chr6:665767 Mch8g2582 Mch-Chr8:28960626 1.29E-56 dispersed
Mch4g2191 Mch-Chr4:23652879 Mch6g0114 Mch-Chr6:665767 1.40E-146 wgd
Mch6g0114 Mch-Chr6:665767 Mch8g1464 Mch-Chr8:10974363 2.20E-153 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77451 PF07714 PK_Tyr_Ser-Thr 6.00E-44 CL0016 Mch PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0114 - - - 0.0