Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0120 ATGGCACTACGGCGGCGACCTCTGTTACTCTTACTTCACCTCTGTCTCTTCTTCTTCTTCTTCTTTCCGGGTTCTGCCGTTGATTTCCTCTTCAATTCCTTCCCCAACCCTTCCAATGGCACAGAAATCATCCTCATCAGCGACGCAAGATTCGATTCCCCCGTCATTCGCCTCAACAACGACTCCAATCCTTTCTCGGTGGGGCGAGCTTTCTATCACACAAAGCTGCGGATGAAACCCACTTCGAATTCCACTGCGATTTCTTCATTTTCAACTTCTTTTGTGTTCTCAATCTTGCTGGAGATCGCTACGAGTCCGGGGTTCGGCATGGCCTTTGTGCTTTCCAATTCCACTTCTCCTCCCGGAGCTATAGCCAGCCAGTACTTCGGCCTCTTCACCAATTCCACCACCCATTCCGTTGCTCCGCTTGTCGCCGTCGAATTCGACACCGGCCGGAACCCAGAACTCAATGACCCCGACGACAGCCACATCGGGATCGATTTGAACAGTGTGTTCTCCAGCAAAATACACAGCGCTGGGTATTTCGACTCCACCGGAGAATTCGTTTCGATTCAGATGAGAAATGGCCAAAACCTTCGCGCTTGGATCGAATTCGATGGCTCTAATTTCGAAATCAATGTCACAATTGCCCCAATTGGGATTTCTCGTCCATCGAGACCCACGCTGAGTTTTAGGGATCCCGTAATGGCGAATTATGTATCGACTGAAATGTTTGTGGGGTTTTCCGCATCGAAGACAAACTGGGTCGAGGCGCAGAGGATTCTGGCTTGGAGTTTTAGCGACACCGGAATTGCCAGAGATATCAACACCACCAATTTCCCGGTGTTTACGAGGCAATCGTCGTCTTCATTATCGCCGGGAACTGTTTCAGGGATTGTTGTTGGTTGTGTGTTGTTCGTGATCATAGTTTCTGGAATTGGGGGTTTTTGGTATTGGCGAAAAAACAGAGCAAAACAAGAGGACAATGAAATTGAGGATTGGGAACTCGAGTATTGGCCTCACAGATTCTCCAACGAGGAGCTCAGCCGGGCCACCGATGGCTTCTCCGACAAGAATCTCCTCGGCTCCGGCGGATTCGGGCGAGTCTTCAAAGGAACTCTACCAAACGACACGGAAATCGCCGTCAAGTGCGTAAATCACGATTCAAAACAGGGGCTAAAAGAATTCATGGCGGAAATCTCAAGTATGGGCAGACTTCAGCACAAAAATCTAGTTCAAATGCGAGGCTGGTGCCGGAAAGGCAACGAATTAATGCTCGTCTACGATTACATGCCGAATGGAAGCCTGAATCGCTGGATTTTCGACCGACCCACCACGGTACTCGACTGGAAACAGCGCCGCCGTGTCCTCGCCGACGTTGCAGAGGGACTCAACTATCTCCACCACGGCTGGGACCAGGTGGTGATTCACAGAGACATAAAATCGAGCAATGTGTTGTTGGATTCCGATATGAGGGGAAGAGTCGGCGATTTTGGGCTCGCGAAATTGTACCAGCACGGCGAGACTCCGAACACCACTCGGGTCGTCGGGACTTTGGGTTATTTGGCGCCGGAGATCGCGACGGTGGCTACTCCGACGGCCGCCAGCGATGTGTATAGTTATGGGGTGGTGGTTCTTGAAGTGGCGTGCGGGCGGCGGCCGATTGAGTTGGCGGTGGACGAAGAAGAGACGGTGCTTATTGACTGGGTGAGAGATCTTTACGCCGCCGGCCGGCTGATTGAGGCGGCGGACTCGCGGATTCGAGGGGAGTATGAAGTGGAGGAGATGGAGATGGCTTTGAAGCTTGGTTTGGCTTGTTGTCATCCGTGTCCCGATCGCCGGCCGACGATGAAGGAGGTGGTGGCGGTTCTGATTGGAGAACAGCCGGCGGCCGAGTCCTCGGAAATGTTGTCGGGATTGGCAGGCGGCGCGGTTGACGGCGGAGACGCCGACTTGTGA 1959 52.73 MALRRRPLLLLLHLCLFFFFFFPGSAVDFLFNSFPNPSNGTEIILISDARFDSPVIRLNNDSNPFSVGRAFYHTKLRMKPTSNSTAISSFSTSFVFSILLEIATSPGFGMAFVLSNSTSPPGAIASQYFGLFTNSTTHSVAPLVAVEFDTGRNPELNDPDDSHIGIDLNSVFSSKIHSAGYFDSTGEFVSIQMRNGQNLRAWIEFDGSNFEINVTIAPIGISRPSRPTLSFRDPVMANYVSTEMFVGFSASKTNWVEAQRILAWSFSDTGIARDINTTNFPVFTRQSSSSLSPGTVSGIVVGCVLFVIIVSGIGGFWYWRKNRAKQEDNEIEDWELEYWPHRFSNEELSRATDGFSDKNLLGSGGFGRVFKGTLPNDTEIAVKCVNHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNRWIFDRPTTVLDWKQRRRVLADVAEGLNYLHHGWDQVVIHRDIKSSNVLLDSDMRGRVGDFGLAKLYQHGETPNTTRVVGTLGYLAPEIATVATPTAASDVYSYGVVVLEVACGRRPIELAVDEEETVLIDWVRDLYAAGRLIEAADSRIRGEYEVEEMEMALKLGLACCHPCPDRRPTMKEVVAVLIGEQPAAESSEMLSGLAGGAVDGGDADL 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 691627 693585 + MC06g_new0024 Mch6g0120 689567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0120 652 ProSiteProfiles Protein kinase domain profile. 355 631 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0120 652 PANTHER - 55 628 IPR050528 GO:0005886(PANTHER)
Mch6g0120 652 Gene3D - 25 284 - -
Mch6g0120 652 Gene3D Transferase(Phosphotransferase) domain 1 431 638 - -
Mch6g0120 652 FunFam L-type lectin-domain containing receptor kinase S.4 431 637 - -
Mch6g0120 652 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Mch6g0120 652 CDD lectin_legume_LecRK_Arcelin_ConA 27 270 IPR001220 GO:0030246(InterPro)
Mch6g0120 652 Pfam Protein kinase domain 356 621 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0120 652 Gene3D Phosphorylase Kinase; domain 1 317 430 - -
Mch6g0120 652 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 272 IPR013320 -
Mch6g0120 652 FunFam L-type lectin-domain containing receptor kinase S.4 25 274 - -
Mch6g0120 652 Pfam Legume lectin domain 27 279 IPR001220 GO:0030246(InterPro)
Mch6g0120 652 FunFam L-type lectin-domain containing receptor kinase S.1 340 430 - -
Mch6g0120 652 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524(InterPro)
Mch6g0120 652 CDD STKc_IRAK 361 624 - -
Mch6g0120 652 SUPERFAMILY Protein kinase-like (PK-like) 331 624 IPR011009 -
Mch6g0120 652 SMART serkin_6 355 631 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0120 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0543 Mch-Chr10:3538678 Mch6g0120 Mch-Chr6:691627 3.13E-50 dispersed
Mch5g1455 Mch-Chr5:15635036 Mch6g0120 Mch-Chr6:691627 4.67E-106 dispersed
Mch5g1968 Mch-Chr5:19508354 Mch6g0120 Mch-Chr6:691627 3.84E-133 dispersed
Mch6g0120 Mch-Chr6:691627 Mch7g0868 Mch-Chr7:13220381 2.33E-76 dispersed
Mch6g0120 Mch-Chr6:691627 Mch5g1860 Mch-Chr5:18765416 7.31E-170 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77452 PF00069 Pkinase 1.20E-51 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0120 - - - 0.0