Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0134 ATGCCTGTAAATTCATGGACCCTCCCCTCAGCTATCCTAATTCTCTGTTTTTCAGTCTTCCCTCTCACAACTTCCGCCATTAACGAACAGGGTCAAGCTCTACTCACTTGGAAGCTAAGTTTTAATGGATCAAACGAGGTGCTACGTAATTGGGACCCCAACAACGAAACGCCATGTGGGTGGTTTGGAATCACTTGCAACAACAACAGAGAAGTAGTGGAAGTAGTATTGAGGTACGTGAACTTACCTGGTGAAGTTCCATCGAATTTCTCTTCACTGTCATCTTTGAATAAGCTCGTCTTGCCGGGAGCAAATCTCACTGGTTCCATCCCGAAAGAGATCGGTGCTCTTAGTCAGTTGAGTACCTTGGACCTCAGTGACAATGGCCTCACTGGAGAGATTCCAACTGAAATAGGTGCGTTGCTAAATCTCGAACATCTTCGCCTCAATTCGAATCATCTCGAAGGGTCAATTCCTGCAGGGATCGGGAATCTCACAAGCTTAAAGGAGCTGATTCTCTTTGACAATCAGTTGAGCGGTGAAATTCCCAATAGCATAGGAAATTTGAAACAGCTTGAAGTGATTAGAGCTGGAGGGAACAAGAACTTACGAGGTTCTCTGCCGGAAGAAATTGGAAACTGCAGCAGCTTGGTAACCCTGGGTCTGGCTGAAACAAGCATCTCGGGCTTTCTTCCGTCTAGTCTTGGCCTCCTCAAGAAGCTTCAGACATTGGCAATTTATACTGCCCTTCTCTCCGGCCAGATACCTCATGAACTTGGCGACTGCACTGAGCTCCAAAATGTCTTTCTCTACGAGAATTCGATCTCCGGCTCAATCCCAAGCTCGTTAGGAAGGTTACAAAATCTCCAGAGTCTGCTACTATGGCAGAACAATTTGGTCGGCGTTATACCGCCGGAGCTAGGTAGCTGTAACCAGTTATTAGTCATCGACGTTTCGATTAATTCCCTGACGGGGAGCATTCCTTCAACATTTGGGAACTTAACGTTGCTCCAAGAATTGCAACTGAGTGTAAATCAATTATCCGGTGAGATCCCCAAAGAGATCGGAAACTGTCCGAGAATCACTCACATCGAGCTTGATAATAACCAATTCACCGGTACGATCCCCTCCGAATTGGGAAATCTCACCAATCTGACATTGCTGTTCTTGTGGCAAAACAAGCTCGAGGGAAGTATTCCACCCACCATTTCCAACTGTCGCAATCTGGAGGCCGTGGATTTATCACTGAACGGGTTGACAGGTTCAATTCCGACGGGAATTTTCCAGTTGAAAAAGCTATCCAAGCTTCTGCTCCTCTCAAACAATCTCTCCGGCGTGATACCGCCGGCAATAGGTAACTGTTCGTCTCTATTTCGGTTCCGAGCGAGTAACAATAGGCTCACGGGAGAAGTTCCGCCGGAGATTGGGAATTTGAATAACTTGATTTTCCTGGACCTCGGAAACAATCGCCTCACTGGAGCGTTGCCTCCGGAGATTTCCGGGTGTAGAAACTTGACATTCCTTGATTTGCATTCCAACTCCCTAGCAAAATTTCTTCCAGAAGAATTCAACCAGCTTTCTTTCCTCCAGTACGTTGATCTCTCAAATAATCTAATCGAAGGGACGCCGAATCCGAGTTTTGGATCTTTCAACTCGCTCACGAAACTCGTTCTCTCAAACAATCGATTCTCGGGGCCTATACCGACTGAAATCGGTTCCTGCTTGAAACTACAGTTACTAGATTTAAGCGGCAATCAACTCTCGGGGAACATTCCACCGAGCTTAGGCAAGATTCCTTCACTTGAAATTGGTCTCAATCTGAGCTTAAACCAATTAACCGGCGAGCTTCCGAAGGAGTTTGCTAATTTAGACAAGCTCGGGTCGTTGGACCTCTCTTACAACCAGCTCTCAGGCGACCTCCAGATGCTGGCGGACATGCAAAATCTCGTAGTCCTCAATGTATCACACAACAATTTCTCTGGACGCGTACCAGAGACGCCATTCTTCACGGAGCTTCCTCTGAGCGCTCTCTCCGGGAACCCGGACTTGTGCTTTTCTGGCGAAAAATGCTACGCCGATAACCACAGCGGAGCCTCTCGCCACACGCTAGCGGCTCGAGTGGCCATGGTGGTGCTACTGTGCACGGCCTGCGCACTGCTACTAGCGGCAGTTTATATCATTCTGAAAGACAAACATTCATGTCGCGGATGCTCCCATGGGTCCCGCGACGAAAATCCAGAAGCCGGCTTCGACAGCGACGTGGAGCTTGGCTCAGGCTGGGAAGTGACTCTGTACCAGAAGCTCGATCTCTCAATCTCCGACGTAATCAAGTGCTTGACGCCGGCCAACATCATCGGCCGCGGCAAGACCGGCGTCGTCTACAGAGCCTGCATCCCATCATCAGGTCTGATGATCGCCGTCAAGCGATTCCGATCATCAGAGAAGTTCTCGGCGGCGGCATTCTCATCGGAAATCGCTACATTGGCAAGGATCCGGCACCGGAACATCGTCCGATTGCTAGGGTGGGGAGCGAACCGGAGGACGAAACTGCTGTTCTACGACTACTTGCCGAATGGGAATTTGGGCGCGTTACTACACGAGGGAAGTGGGCGCGTGGGGCTGGAGTGGGAGAGCAGATTCAAGATAGCGTTGGGGGTGGCGGAGGGATTGGCTTATTTGCACCACGACTGCGTGCCGGCGATCTTGCACCGGGACGTGAAGGCGCACAATATTCTGTTGGGCGATCGCTACGAGGCGTGCTTGGCGGACTTTGGGCTCGCCCGGTTGCTTGAAGATGCTCACAACGGTTCGTCTTCAGCGAACCCCCAGTTCGCTGGCTCTTACGGCTACTTTGCACCTGAATACGGGTGCATGTTGAGGATCACAGAAAAGAGTGACGTGTATAGCTACGGCGTCGTTTTGCTGGAGATAATAACGGGCAAAAAGCCAGCGGACTCGTCATTCGCGGAGGGGCAGCACGTGATTCAGTGGGTGAGGGAGCATCTGAAGAAGAAAAAGGACCCGGTTTCGATATTGGATCCGAAACTTCAGGGTCACCCGGACCCGCAGATCCAGGAGATCCTGCAGGCCCTCGGAATTTCCCTCCTCTGCACCAGCGACCGCCCCGAAGACCGGCCGACGATGAAAGACGTGGCCGCTTTACTACGCGAGATCCGGCAGGACCAGCCGCCGACAGCGGCGGAGGCCGCCGACAAGCCGCCCAGGAACAGTAGCAACGCGACAAGCTTGGACACAGCGACGTCGTTTTCGTCCTCCTCTTCCACGGCTCCTGCGAGTCAGATGCTTTTGTCGCTGCCCCTCCAGGAGTCGTCCCGTTGCTCTTACGCTTCGCTGTCGTCGTCGGGCGCGTATTTTCCACGCAATCAATGA 3390 51.36 MPVNSWTLPSAILILCFSVFPLTTSAINEQGQALLTWKLSFNGSNEVLRNWDPNNETPCGWFGITCNNNREVVEVVLRYVNLPGEVPSNFSSLSSLNKLVLPGANLTGSIPKEIGALSQLSTLDLSDNGLTGEIPTEIGALLNLEHLRLNSNHLEGSIPAGIGNLTSLKELILFDNQLSGEIPNSIGNLKQLEVIRAGGNKNLRGSLPEEIGNCSSLVTLGLAETSISGFLPSSLGLLKKLQTLAIYTALLSGQIPHELGDCTELQNVFLYENSISGSIPSSLGRLQNLQSLLLWQNNLVGVIPPELGSCNQLLVIDVSINSLTGSIPSTFGNLTLLQELQLSVNQLSGEIPKEIGNCPRITHIELDNNQFTGTIPSELGNLTNLTLLFLWQNKLEGSIPPTISNCRNLEAVDLSLNGLTGSIPTGIFQLKKLSKLLLLSNNLSGVIPPAIGNCSSLFRFRASNNRLTGEVPPEIGNLNNLIFLDLGNNRLTGALPPEISGCRNLTFLDLHSNSLAKFLPEEFNQLSFLQYVDLSNNLIEGTPNPSFGSFNSLTKLVLSNNRFSGPIPTEIGSCLKLQLLDLSGNQLSGNIPPSLGKIPSLEIGLNLSLNQLTGELPKEFANLDKLGSLDLSYNQLSGDLQMLADMQNLVVLNVSHNNFSGRVPETPFFTELPLSALSGNPDLCFSGEKCYADNHSGASRHTLAARVAMVVLLCTACALLLAAVYIILKDKHSCRGCSHGSRDENPEAGFDSDVELGSGWEVTLYQKLDLSISDVIKCLTPANIIGRGKTGVVYRACIPSSGLMIAVKRFRSSEKFSAAAFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDYLPNGNLGALLHEGSGRVGLEWESRFKIALGVAEGLAYLHHDCVPAILHRDVKAHNILLGDRYEACLADFGLARLLEDAHNGSSSANPQFAGSYGYFAPEYGCMLRITEKSDVYSYGVVLLEIITGKKPADSSFAEGQHVIQWVREHLKKKKDPVSILDPKLQGHPDPQIQEILQALGISLLCTSDRPEDRPTMKDVAALLREIRQDQPPTAAEAADKPPRNSSNATSLDTATSFSSSSSTAPASQMLLSLPLQESSRCSYASLSSSGAYFPRNQ 1129
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 803128 812045 + MC06g0106 Mch6g0134 689581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0134 1129 Gene3D Ribonuclease Inhibitor 29 142 IPR032675 -
Mch6g0134 1129 Gene3D Transferase(Phosphotransferase) domain 1 856 1080 - -
Mch6g0134 1129 Pfam Leucine Rich Repeat 120 141 IPR001611 GO:0005515(InterPro)
Mch6g0134 1129 Pfam Leucine Rich Repeat 384 406 IPR001611 GO:0005515(InterPro)
Mch6g0134 1129 Pfam Leucine Rich Repeat 361 382 IPR001611 GO:0005515(InterPro)
Mch6g0134 1129 Pfam Leucine Rich Repeat 167 189 IPR001611 GO:0005515(InterPro)
Mch6g0134 1129 Pfam Leucine Rich Repeat 504 526 IPR001611 GO:0005515(InterPro)
Mch6g0134 1129 Pfam Leucine Rich Repeat 648 666 IPR001611 GO:0005515(InterPro)
Mch6g0134 1129 Pfam Leucine Rich Repeat 288 310 IPR001611 GO:0005515(InterPro)
Mch6g0134 1129 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515(InterPro)
Mch6g0134 1129 Pfam Leucine Rich Repeat 337 358 IPR001611 GO:0005515(InterPro)
Mch6g0134 1129 Pfam Leucine Rich Repeat 480 502 IPR001611 GO:0005515(InterPro)
Mch6g0134 1129 ProSitePatterns Protein kinases ATP-binding region signature. 785 808 IPR017441 GO:0005524(InterPro)
Mch6g0134 1129 Pfam Leucine rich repeat 529 587 IPR001611 GO:0005515(InterPro)
Mch6g0134 1129 ProSiteProfiles Protein kinase domain profile. 779 1055 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0134 1129 Gene3D Ribonuclease Inhibitor 422 692 IPR032675 -
Mch6g0134 1129 SUPERFAMILY RNI-like 270 637 - -
Mch6g0134 1129 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 440 1056 IPR051716 -
Mch6g0134 1129 MobiDBLite consensus disorder prediction 1062 1099 - -
Mch6g0134 1129 MobiDBLite consensus disorder prediction 1072 1099 - -
Mch6g0134 1129 Gene3D Ribonuclease Inhibitor 331 421 IPR032675 -
Mch6g0134 1129 FunFam Leucine-rich repeat receptor protein kinase EMS1 305 400 - -
Mch6g0134 1129 SUPERFAMILY L domain-like 28 299 - -
Mch6g0134 1129 SMART serkin_6 779 1055 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0134 1129 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 856 1072 - -
Mch6g0134 1129 Pfam Protein kinase domain 783 1051 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0134 1129 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 27 200 - -
Mch6g0134 1129 SUPERFAMILY Protein kinase-like (PK-like) 770 1055 IPR011009 -
Mch6g0134 1129 FunFam Leucine-rich repeat receptor protein kinase EMS1 207 304 - -
Mch6g0134 1129 FunFam LRR receptor-like serine/threonine-protein kinase 768 855 - -
Mch6g0134 1129 Gene3D Ribonuclease Inhibitor 143 229 IPR032675 -
Mch6g0134 1129 SMART LRR_typ_2 646 679 IPR003591 -
Mch6g0134 1129 SMART LRR_typ_2 286 310 IPR003591 -
Mch6g0134 1129 SMART LRR_typ_2 117 140 IPR003591 -
Mch6g0134 1129 SMART LRR_typ_2 503 525 IPR003591 -
Mch6g0134 1129 SMART LRR_typ_2 430 454 IPR003591 -
Mch6g0134 1129 SMART LRR_typ_2 478 502 IPR003591 -
Mch6g0134 1129 SMART LRR_typ_2 526 549 IPR003591 -
Mch6g0134 1129 SMART LRR_typ_2 334 358 IPR003591 -
Mch6g0134 1129 SMART LRR_typ_2 550 574 IPR003591 -
Mch6g0134 1129 SMART LRR_typ_2 382 406 IPR003591 -
Mch6g0134 1129 SMART LRR_typ_2 141 164 IPR003591 -
Mch6g0134 1129 SMART LRR_typ_2 165 189 IPR003591 -
Mch6g0134 1129 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 408 694 - -
Mch6g0134 1129 Gene3D Phosphorylase Kinase; domain 1 762 855 - -
Mch6g0134 1129 Gene3D Ribonuclease Inhibitor 230 330 IPR032675 -
Mch6g0134 1129 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Mch6g0134 1129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 901 913 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1909 Mch-Chr4:21750389 Mch6g0134 Mch-Chr6:803128 5.25E-91 dispersed
Mch6g0134 Mch-Chr6:803128 Mch7g0882 Mch-Chr7:13388969 2.92E-100 dispersed
Mch11g1310 Mch-Chr11:9263070 Mch6g0134 Mch-Chr6:803128 5.58E-124 transposed
Mch3g1300 Mch-Chr3:15904144 Mch6g0134 Mch-Chr6:803128 5.57E-16 transposed
Mch3g1430 Mch-Chr3:16690633 Mch6g0134 Mch-Chr6:803128 1.21E-110 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77453 PF00069 Pkinase 7.10E-40 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0134 - - - 0.0