Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0159 ATGAAGGAGAACAATGATGGATTCGTGCGGGCGGATCAGATTGATCTGAAGAGTTTAGATGAGCAACTCGAGCGGCATCTTAACAGAGCTCTGACGATGGAGAAGAACAAGAAGAAAGATGAAGACGGCAATAGCTTTCTCACTGCCGCACCCATCCCTCGCAGTAGGTCTACTAAAGTCGCCGCCAAGGAGCGCCAGGAGTGGGAGATCGATCCATCCAAACTCATCATCAAGACCGTCCTTGCTCGCGGAACTTTCGGCACCGTCCACCGCGGCGTTTACGACGGACTGGATGTCGCCGTCAAGTTGCTGGATTGGGGAGAAGAAGGTCACAGGACAGAAGCTGAAATTGCTTCACTAAGGGCAGCTTTTAAACAGGAAGTTGCTGTTTGGCATAAACTAGATCATCCCAATGTTACCAAGTTTATAGGGGCAACAATGGGCTCGGCGGAGTTACAGATTCAAACTGAAAATGGTCTAATAGGCATGCCAAGTAACATATGTTGTGTTGTGGTGGAATATCTTGCTGGGGGTGCGCTTAAATCTTACCTCATAAAGAACAGGAGAAGGAAGCTAGCTTTCAAGGTGGTTGTCCAGCTGGCACTTGATCTTGCTAGAGGGTTGAGTTACCTTCATTCTCAGAAGATCGTCCACAGAGATGTAAAGACAGAAAACATGCTGTTGGACAAAACACGTACGGTCAAAATTGCTGATTTTGGCGTTGCTCGAGTTGAGGCCTCAAATCCTAATGATATGACTGGGGAGACCGGGACACTCGGTTACATGGCTCCAGAGGTTCTCAACGGCAACCCATATAACAGGAAGTGTGATGTGTACAGTTTTGGAATCTGCCTGTGGGAAATTTATTGCTGTGACATGCCATACCCCGACCTTAGTTTCTCCGAAGTGACTTCTGCTGTGGTTCGTCAGAATCTGAGGCCAGAGATACCGAGATGTTGCCCGAGTTCTCTGGCAAACGTGATGAAGCGTTGCTGGGATGCGACCCCAGACAAGCGGCCGGAGATGGACGAAGTGGTTTCCATGTTGGAGGTCATAGACACATCCAAAGGTGGAGGTATGATCCCTGTTGATCAAGCTCAAGGTTGTCTATGCTTTCGAAAATATAGAGGGCCATAA 1137 48.46 MKENNDGFVRADQIDLKSLDEQLERHLNRALTMEKNKKKDEDGNSFLTAAPIPRSRSTKVAAKERQEWEIDPSKLIIKTVLARGTFGTVHRGVYDGLDVAVKLLDWGEEGHRTEAEIASLRAAFKQEVAVWHKLDHPNVTKFIGATMGSAELQIQTENGLIGMPSNICCVVVEYLAGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDATPDKRPEMDEVVSMLEVIDTSKGGGMIPVDQAQGCLCFRKYRGP 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1063651 1067528 + MC06g0130 Mch6g0159 689606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0159 378 CDD STKc_MAP3K-like 81 349 - -
Mch6g0159 378 SMART serkin_6 75 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0159 378 ProSiteProfiles Protein kinase domain profile. 75 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g0159 378 FunFam Kinase suppressor of Ras 1 64 159 - -
Mch6g0159 378 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 55 350 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Mch6g0159 378 PRINTS Tyrosine kinase catalytic domain signature 320 342 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0159 378 PRINTS Tyrosine kinase catalytic domain signature 172 185 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0159 378 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0159 378 PRINTS Tyrosine kinase catalytic domain signature 210 228 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0159 378 SUPERFAMILY Protein kinase-like (PK-like) 56 350 IPR011009 -
Mch6g0159 378 FunFam Serine/threonine-protein kinase HT1 175 360 - -
Mch6g0159 378 Coils Coil 16 36 - -
Mch6g0159 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g0159 378 Gene3D Phosphorylase Kinase; domain 1 63 158 - -
Mch6g0159 378 Gene3D Transferase(Phosphotransferase) domain 1 176 364 - -
Mch6g0159 378 MobiDBLite consensus disorder prediction 32 64 - -
Mch6g0159 378 Pfam Protein tyrosine and serine/threonine kinase 77 349 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0159 Mch-Chr6:1063651 Mch9g0894 Mch-Chr9:6914541 5.20E-185 dispersed
Mch6g0159 Mch-Chr6:1063651 Mch8g1517 Mch-Chr8:11697831 2.86E-237 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77454 PF07714 PK_Tyr_Ser-Thr 2.40E-63 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0159 - - - 0.0