Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0159 | ATGAAGGAGAACAATGATGGATTCGTGCGGGCGGATCAGATTGATCTGAAGAGTTTAGATGAGCAACTCGAGCGGCATCTTAACAGAGCTCTGACGATGGAGAAGAACAAGAAGAAAGATGAAGACGGCAATAGCTTTCTCACTGCCGCACCCATCCCTCGCAGTAGGTCTACTAAAGTCGCCGCCAAGGAGCGCCAGGAGTGGGAGATCGATCCATCCAAACTCATCATCAAGACCGTCCTTGCTCGCGGAACTTTCGGCACCGTCCACCGCGGCGTTTACGACGGACTGGATGTCGCCGTCAAGTTGCTGGATTGGGGAGAAGAAGGTCACAGGACAGAAGCTGAAATTGCTTCACTAAGGGCAGCTTTTAAACAGGAAGTTGCTGTTTGGCATAAACTAGATCATCCCAATGTTACCAAGTTTATAGGGGCAACAATGGGCTCGGCGGAGTTACAGATTCAAACTGAAAATGGTCTAATAGGCATGCCAAGTAACATATGTTGTGTTGTGGTGGAATATCTTGCTGGGGGTGCGCTTAAATCTTACCTCATAAAGAACAGGAGAAGGAAGCTAGCTTTCAAGGTGGTTGTCCAGCTGGCACTTGATCTTGCTAGAGGGTTGAGTTACCTTCATTCTCAGAAGATCGTCCACAGAGATGTAAAGACAGAAAACATGCTGTTGGACAAAACACGTACGGTCAAAATTGCTGATTTTGGCGTTGCTCGAGTTGAGGCCTCAAATCCTAATGATATGACTGGGGAGACCGGGACACTCGGTTACATGGCTCCAGAGGTTCTCAACGGCAACCCATATAACAGGAAGTGTGATGTGTACAGTTTTGGAATCTGCCTGTGGGAAATTTATTGCTGTGACATGCCATACCCCGACCTTAGTTTCTCCGAAGTGACTTCTGCTGTGGTTCGTCAGAATCTGAGGCCAGAGATACCGAGATGTTGCCCGAGTTCTCTGGCAAACGTGATGAAGCGTTGCTGGGATGCGACCCCAGACAAGCGGCCGGAGATGGACGAAGTGGTTTCCATGTTGGAGGTCATAGACACATCCAAAGGTGGAGGTATGATCCCTGTTGATCAAGCTCAAGGTTGTCTATGCTTTCGAAAATATAGAGGGCCATAA | 1137 | 48.46 | MKENNDGFVRADQIDLKSLDEQLERHLNRALTMEKNKKKDEDGNSFLTAAPIPRSRSTKVAAKERQEWEIDPSKLIIKTVLARGTFGTVHRGVYDGLDVAVKLLDWGEEGHRTEAEIASLRAAFKQEVAVWHKLDHPNVTKFIGATMGSAELQIQTENGLIGMPSNICCVVVEYLAGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDATPDKRPEMDEVVSMLEVIDTSKGGGMIPVDQAQGCLCFRKYRGP | 378 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1063651 | 1067528 | + | MC06g0130 | Mch6g0159 | 689606 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0159 | 378 | CDD | STKc_MAP3K-like | 81 | 349 | - | - | |
Mch6g0159 | 378 | SMART | serkin_6 | 75 | 352 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0159 | 378 | ProSiteProfiles | Protein kinase domain profile. | 75 | 352 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g0159 | 378 | FunFam | Kinase suppressor of Ras 1 | 64 | 159 | - | - | |
Mch6g0159 | 378 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 55 | 350 | IPR051681 | GO:0004674(PANTHER)|GO:0005886(PANTHER) | |
Mch6g0159 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 320 | 342 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch6g0159 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 172 | 185 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch6g0159 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 276 | 298 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch6g0159 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 210 | 228 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch6g0159 | 378 | SUPERFAMILY | Protein kinase-like (PK-like) | 56 | 350 | IPR011009 | - | |
Mch6g0159 | 378 | FunFam | Serine/threonine-protein kinase HT1 | 175 | 360 | - | - | |
Mch6g0159 | 378 | Coils | Coil | 16 | 36 | - | - | |
Mch6g0159 | 378 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 216 | 228 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch6g0159 | 378 | Gene3D | Phosphorylase Kinase; domain 1 | 63 | 158 | - | - | |
Mch6g0159 | 378 | Gene3D | Transferase(Phosphotransferase) domain 1 | 176 | 364 | - | - | |
Mch6g0159 | 378 | MobiDBLite | consensus disorder prediction | 32 | 64 | - | - | |
Mch6g0159 | 378 | Pfam | Protein tyrosine and serine/threonine kinase | 77 | 349 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g0159 | Mch-Chr6:1063651 | Mch9g0894 | Mch-Chr9:6914541 | 5.20E-185 | dispersed | |
Mch6g0159 | Mch-Chr6:1063651 | Mch8g1517 | Mch-Chr8:11697831 | 2.86E-237 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77454 | PF07714 | PK_Tyr_Ser-Thr | 2.40E-63 | CL0016 | Mch | PK |
Pathway information
