Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g0160 | ATGGCTGCTCGCAGAGGAATCTCTTCTTTACTCTCTCGCTCTCTCTCTTCTTCTTCTGGTTATGGGTTTTCTTCTCTTCTTCTTTCTCAAGGAAGGGTTTCAAGCTTCCATGGAAGAGGAAACAGATTCAGCACATCTGCTGTGGCAGAGGAGGAGCTTGTCACTCCTCCTGTTCAGATAAGTTACACTCAACATCTGATTAATGGGCAGTTTGTGGATGCTGCTTCAGGGAAAACGTTTCCTACCTACGACCCCCGGACCGGGGAAGTGATTGCTCATGTTGCCGAGGGCGATGCCGAGGATATCAACCGCGCTGTAGTGGCAGCTCGCAAGGCTTTTGACGAGGGGCCATGGCCGAGAATGAGTGCTTATGAACGATCGAGGATATTACTGCGGTTTGCGGATTTGGTTGAGAAACATAGCCTTGAACTTGCAGCATTGGAGACATGGAACAATGGGAAACCTTACGAACAATCGGCCAAATCTGAATTACCGACAGTTGTTCGCCTGTTTCACTATTACGCCGGCTGGGCAGACAAAATCCATGGCTTGACAGTTCCAGCAGATGGGCAACATCATGTGCAAATATTACATGAACCAATTGGAGTTGCAGGACAGATAATTCCATGGAACTTTCCTCTCCTTATGTTTGCTTGGAAAGTTGGTCCTGCTCTAGCCTGTGGCAACGCCATTGTCCTGAAGACTGCAGAGCAAACACCTCTGACTGCCCTTTATGTGGCAAAGCTATTCCACGAGGCTGGTCTTCCTCCAGGGGTTCTGAATGTTGTTTCAGGCTATGGTCCGACGGCCGGTGCTGCCCTTGCTAGCCATATGGATGTAGACAAGCTAGCTTTCACAGGATCCACAGACACAGGAAAAATTGTGCTTGAATTGGCGGCGAAAAGCAATCTTAAGCCAGTAACGCTAGAACTTGGAGGGAAATCACCTTTCATCGTTTGTGAGGATGCAGATGTCGACAAGGCTGTGGAGCTTGCTCATTTTGCTCTTTTTTACAATCAGGGGCAATGTTGCTGTGCTGGGTCTCGTACTTACGTGCACGAGCGTGTATATGACGAATTTGTCGAGAAATCAAAGGCACGTGCTCAAAGGCGCATAGTTGGCGACCCTTTCAAGAAGGGTGTTGAACAGGGTCCTCAGATTGACTCGGAGCAATTTGAAAAAGTTCTAAGATACATAAAATGTGGCGTTGAAAGTAATGCTAGTCTGGAATGTGGAGGTGATAGACTTGGCTCTAAGGGATACTTCATCCAGCCAACAGTTTTCTCAAATGTTAAGGACGATATGTTAATAGCAAAGGATGAAATCTTTGGCCCTGTACAATCCATCTTGAAATTCAAGGACATCCATGAAGTAATTCAAAGGGCAAACTCAAGTCGCTTCGGTCTAGCTGCGGGAGTTTTCACTAAGAACATAGACACGGCCAACACCCTAACCCGAGCGTTGAAAGCTGGAACTGTGTGGGTCAATTGCTTCGACATCTTCGACGCTGCAATACCGTTTGGCGGGTATAAGATGAGCGGAATAGGGAGGGAGAAGGGAGTTTACAGCCTTCAAAACTATTTGCAGGTGAAGGCTGTTGTTACTCCTCTGAAGAACCCAGCATGGTTGTGA | 1632 | 47.43 | MAARRGISSLLSRSLSSSSGYGFSSLLLSQGRVSSFHGRGNRFSTSAVAEEELVTPPVQISYTQHLINGQFVDAASGKTFPTYDPRTGEVIAHVAEGDAEDINRAVVAARKAFDEGPWPRMSAYERSRILLRFADLVEKHSLELAALETWNNGKPYEQSAKSELPTVVRLFHYYAGWADKIHGLTVPADGQHHVQILHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNAIVLKTAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKSKARAQRRIVGDPFKKGVEQGPQIDSEQFEKVLRYIKCGVESNASLECGGDRLGSKGYFIQPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIHEVIQRANSSRFGLAAGVFTKNIDTANTLTRALKAGTVWVNCFDIFDAAIPFGGYKMSGIGREKGVYSLQNYLQVKAVVTPLKNPAWL | 543 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1068521 | 1072300 | - | MC06g0131 | Mch6g0160 | 689607 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g0160 | 543 | FunFam | Aldehyde dehydrogenase, putative | 505 | 531 | - | - | |
Mch6g0160 | 543 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 315 | 504 | IPR016163 | GO:0016620(InterPro) | |
Mch6g0160 | 543 | FunFam | ALD5p Mitochondrial aldehyde dehydrogenase | 67 | 330 | - | - | |
Mch6g0160 | 543 | CDD | ALDH_F2BC | 60 | 535 | - | - | |
Mch6g0160 | 543 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 309 | 316 | IPR029510 | GO:0016491(InterPro) | |
Mch6g0160 | 543 | SUPERFAMILY | ALDH-like | 59 | 537 | IPR016161 | GO:0016491(InterPro) | |
Mch6g0160 | 543 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 337 | 348 | IPR016160 | GO:0016491(InterPro) | |
Mch6g0160 | 543 | FunFam | Mitochondrial aldehyde dehydrogenase 2 | 315 | 504 | - | - | |
Mch6g0160 | 543 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 60 | 535 | - | GO:0004029(PANTHER) | |
Mch6g0160 | 543 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 77 | 533 | IPR016162 | GO:0016491(InterPro) | |
Mch6g0160 | 543 | Pfam | Aldehyde dehydrogenase family | 71 | 533 | IPR015590 | GO:0016491(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g0160 | Mch-Chr6:1068521 | Mch6g0791 | Mch-Chr6:5504644 | 1.37E-200 | dispersed | |
Mch6g0182 | Mch-Chr6:1220730 | Mch6g0160 | Mch-Chr6:1068521 | 1.22E-115 | transposed | |
Mch6g0160 | Mch-Chr6:1068521 | Mch8g0005 | Mch-Chr8:44312 | 2.19e-316 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch6g0160 | K00128 | - | csv:101209430 | 972.615 |