Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0160 ATGGCTGCTCGCAGAGGAATCTCTTCTTTACTCTCTCGCTCTCTCTCTTCTTCTTCTGGTTATGGGTTTTCTTCTCTTCTTCTTTCTCAAGGAAGGGTTTCAAGCTTCCATGGAAGAGGAAACAGATTCAGCACATCTGCTGTGGCAGAGGAGGAGCTTGTCACTCCTCCTGTTCAGATAAGTTACACTCAACATCTGATTAATGGGCAGTTTGTGGATGCTGCTTCAGGGAAAACGTTTCCTACCTACGACCCCCGGACCGGGGAAGTGATTGCTCATGTTGCCGAGGGCGATGCCGAGGATATCAACCGCGCTGTAGTGGCAGCTCGCAAGGCTTTTGACGAGGGGCCATGGCCGAGAATGAGTGCTTATGAACGATCGAGGATATTACTGCGGTTTGCGGATTTGGTTGAGAAACATAGCCTTGAACTTGCAGCATTGGAGACATGGAACAATGGGAAACCTTACGAACAATCGGCCAAATCTGAATTACCGACAGTTGTTCGCCTGTTTCACTATTACGCCGGCTGGGCAGACAAAATCCATGGCTTGACAGTTCCAGCAGATGGGCAACATCATGTGCAAATATTACATGAACCAATTGGAGTTGCAGGACAGATAATTCCATGGAACTTTCCTCTCCTTATGTTTGCTTGGAAAGTTGGTCCTGCTCTAGCCTGTGGCAACGCCATTGTCCTGAAGACTGCAGAGCAAACACCTCTGACTGCCCTTTATGTGGCAAAGCTATTCCACGAGGCTGGTCTTCCTCCAGGGGTTCTGAATGTTGTTTCAGGCTATGGTCCGACGGCCGGTGCTGCCCTTGCTAGCCATATGGATGTAGACAAGCTAGCTTTCACAGGATCCACAGACACAGGAAAAATTGTGCTTGAATTGGCGGCGAAAAGCAATCTTAAGCCAGTAACGCTAGAACTTGGAGGGAAATCACCTTTCATCGTTTGTGAGGATGCAGATGTCGACAAGGCTGTGGAGCTTGCTCATTTTGCTCTTTTTTACAATCAGGGGCAATGTTGCTGTGCTGGGTCTCGTACTTACGTGCACGAGCGTGTATATGACGAATTTGTCGAGAAATCAAAGGCACGTGCTCAAAGGCGCATAGTTGGCGACCCTTTCAAGAAGGGTGTTGAACAGGGTCCTCAGATTGACTCGGAGCAATTTGAAAAAGTTCTAAGATACATAAAATGTGGCGTTGAAAGTAATGCTAGTCTGGAATGTGGAGGTGATAGACTTGGCTCTAAGGGATACTTCATCCAGCCAACAGTTTTCTCAAATGTTAAGGACGATATGTTAATAGCAAAGGATGAAATCTTTGGCCCTGTACAATCCATCTTGAAATTCAAGGACATCCATGAAGTAATTCAAAGGGCAAACTCAAGTCGCTTCGGTCTAGCTGCGGGAGTTTTCACTAAGAACATAGACACGGCCAACACCCTAACCCGAGCGTTGAAAGCTGGAACTGTGTGGGTCAATTGCTTCGACATCTTCGACGCTGCAATACCGTTTGGCGGGTATAAGATGAGCGGAATAGGGAGGGAGAAGGGAGTTTACAGCCTTCAAAACTATTTGCAGGTGAAGGCTGTTGTTACTCCTCTGAAGAACCCAGCATGGTTGTGA 1632 47.43 MAARRGISSLLSRSLSSSSGYGFSSLLLSQGRVSSFHGRGNRFSTSAVAEEELVTPPVQISYTQHLINGQFVDAASGKTFPTYDPRTGEVIAHVAEGDAEDINRAVVAARKAFDEGPWPRMSAYERSRILLRFADLVEKHSLELAALETWNNGKPYEQSAKSELPTVVRLFHYYAGWADKIHGLTVPADGQHHVQILHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNAIVLKTAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKSKARAQRRIVGDPFKKGVEQGPQIDSEQFEKVLRYIKCGVESNASLECGGDRLGSKGYFIQPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIHEVIQRANSSRFGLAAGVFTKNIDTANTLTRALKAGTVWVNCFDIFDAAIPFGGYKMSGIGREKGVYSLQNYLQVKAVVTPLKNPAWL 543
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 1068521 1072300 - MC06g0131 Mch6g0160 689607
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0160 543 FunFam Aldehyde dehydrogenase, putative 505 531 - -
Mch6g0160 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 315 504 IPR016163 GO:0016620(InterPro)
Mch6g0160 543 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 67 330 - -
Mch6g0160 543 CDD ALDH_F2BC 60 535 - -
Mch6g0160 543 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 309 316 IPR029510 GO:0016491(InterPro)
Mch6g0160 543 SUPERFAMILY ALDH-like 59 537 IPR016161 GO:0016491(InterPro)
Mch6g0160 543 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 337 348 IPR016160 GO:0016491(InterPro)
Mch6g0160 543 FunFam Mitochondrial aldehyde dehydrogenase 2 315 504 - -
Mch6g0160 543 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 60 535 - GO:0004029(PANTHER)
Mch6g0160 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 533 IPR016162 GO:0016491(InterPro)
Mch6g0160 543 Pfam Aldehyde dehydrogenase family 71 533 IPR015590 GO:0016491(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0160 Mch-Chr6:1068521 Mch6g0791 Mch-Chr6:5504644 1.37E-200 dispersed
Mch6g0182 Mch-Chr6:1220730 Mch6g0160 Mch-Chr6:1068521 1.22E-115 transposed
Mch6g0160 Mch-Chr6:1068521 Mch8g0005 Mch-Chr8:44312 2.19e-316 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0160 K00128 - csv:101209430 972.615