Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0163 ATGCTGTCAAGTTCTTGCTTGAGTTTGTTAGAGTTATCATCAGTGGATATGCTGGATTTTCCCCATACACCGAGAACTGTTCCGCGGGTGATGACTGCTTCGGGAATATTTTCTGATAAGGAAAAAGATTTAGAAGTTTCCTCATCGAGATCCCGTGGGAGAAAAATAATAGTGGCAAATTTCCTTCCTCTCCATGCTAAAAAGGATCCGGATTCTGGGAAATGGGTCTTCAGTTTTGATGAGGATTCGCTTCTTCTTCAACTTAAGGATGGCTTCTCCTCTGATGTAGATGTTATATATGTTGGATCGTTAAAGGTTGATGTCGATGTCCGAGAACAAGATGAGGTTTCTCAAAGACTGTTGGAGGAGTTCAACTGTGCACCGACTTTCATTCCTCCGCAGCTTCAGAAACAGTTCTATCATGGATTCTGCAAACAACATTTGTGGCCGATTTTTCACTACATGATGCCAATTTCCCCTTACCACGGTACACGGTTTGATCGGCGTCTTTGGCAGGCGTATCTTTCTGCCAACAAAAGGTTTGCAGATAAAGTTATGGAGGTAATCAATCTGGAAGAAGATTATGTATGGATTCATGACTACCACCTTATGGTTCTCCCTACTTTTTTGAGAAAACGTTACAGTCGAATTAAGCTTGGATTCTTCCTTCATAGCTTGTTTCCCTCATCAGAAATCTACCGAACTCTGCCCGTCAGAGACGAGATTTTGAAGGCATTACTAAATGCAGACCTAATTGGTTTCCATACATTCGATTATGCTCGCCATTTTCTGTCTTGCTGTAGTAGACTGCTTGGTCTGGAGTATGAATCCAAACGAGGCTATCTCACGCTCGAGTATTTTGGCCGTACGATATACATCAAGATTTTGCCTGTTGGAGTTCATATGGGTCGACTTGAATCTGCATTAAATCAACCCCAAACTTCAATCAAGGCCAAGGAAATCAAAGAAGATCTCCAAGGAAAGAAGGTTATTCTTGGTGTTGATGACATGGACATATTTAAAGGTATTGGTCTTAAGTTATTAGCTATGGAACAGCTCCTGAACCAGCATCCCGAGTTACGGGGCAATCTTGTCCTGGTGCAAATTCTAAATCCAGCACGGAGCAATGGGAACGACGTTCAGGAAGCGAAAAGGGAAACTTATGAGATAACCAAAAGAATCAATAAGGCCTTCGGTTTTCCGGGATATGAACCTGTAATCTTGATTGATCATCCTATTCCTCCTGATGAGAAGATTGCGTATTATGTACTAGCAGAGTGCTGCATTGTAAATGCTCTCAGGGATGGTATGAACTTAGTTCCATATGAGTACATTGTTTGCCGACAGGGAACTTCACAAATGGATGAAGTTTTGGAAGTCTCCCCAAGTTCTCCTCGTACCAGCACGCTTGTCGTGTCGGAATTTATAGGTTGTTCGCCATCTCTAAGTGGTGCGATCAGGGTGAACCCATGGGATTTTGATGCTGTAGCTGATGCACTTTATGTGGCTGTCACTATGCCTGCTTTAGAGAAGCAACTGAGGCACGAAAAGCACTACCGATACGTTAGCTCTCATGATGTCGCTTACTGGGCTCGCAGTTTCTCGCAAGATTTGGAGCGAGCATGCCGAGAACACTACAGTAAACGCTGCTGGGGCATTGGTTTTGGTTTAAGCTTCAGAATTTTGTCACTTTCTCCAAGTTTCAGGAAGCTTTCCATTGAACATATTGGCTCTGCATATCGAAGCGCTTCTAGGAGGGCGATTTTTTTGGATTACGATGGGACCGTGGTTTCCCAAGCTTCGTTGGTCAAATCCCCGTCTCCTGAAGTCATTTCCATCCTGAACAATCTTTGCATGGATTCAAAGAATACTGTGTTTATAGTCAGTGGTAGGGGGAAGGATTCTCTTGGTCCATGGTTCGATTCGTGTAAGAATCTTGGTATCGCTGCTGAACACGGATACTACTTGAGGTGGAATAGGGACTCTGATTGGGAAGTTAGTCCATTAGCTGAAAACTTTGGTTGGAAAAGAATAGCAGAACCTGTGATGAAACTATATACTGAGGCAACCGATGGCTCATACATAGAGACCAAGGACAGTGCCTTGGTATGGCACCATCAAGATGCCGATCCTTATTTCGGTTCGTGCCAGGCCATGGAACTTCTGGATCACCTTGAAAACGTTCTTGCCAATGAACCTGTAGTTGCCAAAAGAGGCCAGCAGATCGTTGAAGTAAAACCACAGGGTGTGACTAAAGGATTAGTTGCTGAAAGAGTTCTTGACACAATGATCAGCTCTGAGAAAGCACCCGACTTTGTGATGTGCATTGGAGACGATCGATCCGACGAAGACATGTTCGAGAGCATATTGAGTAGAAGCTATAGCTCATCTCTTGTTACTCCTCCCAAAATATTTGCCTGCACCGTGGGGCAAAAGCCTAGCAAAGCCAAATACTATTTAGACGATACCGCTGATGTTTTGACCTTGCTTCAAAGCCTGGCCACCCCTTCTAACCGTAAATCGAGGTCGAGTTTTGAAACTCGTGTTTTGTTCGAGGATGATGTTTGA 2568 43.77 MLSSSCLSLLELSSVDMLDFPHTPRTVPRVMTASGIFSDKEKDLEVSSSRSRGRKIIVANFLPLHAKKDPDSGKWVFSFDEDSLLLQLKDGFSSDVDVIYVGSLKVDVDVREQDEVSQRLLEEFNCAPTFIPPQLQKQFYHGFCKQHLWPIFHYMMPISPYHGTRFDRRLWQAYLSANKRFADKVMEVINLEEDYVWIHDYHLMVLPTFLRKRYSRIKLGFFLHSLFPSSEIYRTLPVRDEILKALLNADLIGFHTFDYARHFLSCCSRLLGLEYESKRGYLTLEYFGRTIYIKILPVGVHMGRLESALNQPQTSIKAKEIKEDLQGKKVILGVDDMDIFKGIGLKLLAMEQLLNQHPELRGNLVLVQILNPARSNGNDVQEAKRETYEITKRINKAFGFPGYEPVILIDHPIPPDEKIAYYVLAECCIVNALRDGMNLVPYEYIVCRQGTSQMDEVLEVSPSSPRTSTLVVSEFIGCSPSLSGAIRVNPWDFDAVADALYVAVTMPALEKQLRHEKHYRYVSSHDVAYWARSFSQDLERACREHYSKRCWGIGFGLSFRILSLSPSFRKLSIEHIGSAYRSASRRAIFLDYDGTVVSQASLVKSPSPEVISILNNLCMDSKNTVFIVSGRGKDSLGPWFDSCKNLGIAAEHGYYLRWNRDSDWEVSPLAENFGWKRIAEPVMKLYTEATDGSYIETKDSALVWHHQDADPYFGSCQAMELLDHLENVLANEPVVAKRGQQIVEVKPQGVTKGLVAERVLDTMISSEKAPDFVMCIGDDRSDEDMFESILSRSYSSSLVTPPKIFACTVGQKPSKAKYYLDDTADVLTLLQSLATPSNRKSRSSFETRVLFEDDV 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1098180 1103818 + MC06g0133 Mch6g0163 689610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0163 855 CDD HAD_TPP 587 826 - -
Mch6g0163 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 835 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
Mch6g0163 855 Pfam Glycosyltransferase family 20 54 539 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Mch6g0163 855 CDD GT20_TPS 54 539 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Mch6g0163 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 54 543 - -
Mch6g0163 855 FunFam Alpha,alpha-trehalose-phosphate synthase 308 523 - -
Mch6g0163 855 NCBIfam trehalose-phosphatase 583 834 IPR003337 GO:0005992(InterPro)
Mch6g0163 855 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 715 846 - -
Mch6g0163 855 Gene3D Glycogen Phosphorylase B; 307 523 - -
Mch6g0163 855 Pfam Trehalose-phosphatase 589 823 IPR003337 GO:0005992(InterPro)
Mch6g0163 855 FunFam Trehalose-6-phosphate synthase 2 669 748 - -
Mch6g0163 855 SUPERFAMILY HAD-like 586 834 IPR036412 -
Mch6g0163 855 NCBIfam HAD-IIB family hydrolase 587 787 IPR006379 -
Mch6g0163 855 Gene3D - 585 699 IPR023214 -
Mch6g0163 855 Gene3D - 715 848 IPR023214 -
Mch6g0163 855 Gene3D Glycogen Phosphorylase B; 46 306 - -
Mch6g0163 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 585 702 - -
Mch6g0163 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 47 306 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0654 Mch-Chr2:4478704 Mch6g0163 Mch-Chr6:1098180 8.27E-282 dispersed
Mch6g0163 Mch-Chr6:1098180 Mch9g1356 Mch-Chr9:15890577 0 dispersed
Mch6g0163 Mch-Chr6:1098180 Mch9g2224 Mch-Chr9:22716852 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0163 K16055 - csv:101209676 1612.82