Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0175 ATGGCGAATACGATTTATTGCAATCTTCACCAATACCACTGCATCGTCCTGTGTCTGTATGTCTCGTCGTCTCCCATGTTGTCGCAGAAGAGAAACCCGGATGATGGAGATGCTCCGGCTGATGGTGACAATCCCGATGATAAGCGTAGGAAGTTTAGTTTGATGAGTGTGGTTCGTGATGCGTTGTCACTGCAATCAATGCAACAGTTATTGGAGCCAGTCATTCGTAAAGTGGTGAGGGAGGAGGTTGAATTGGCACTAAGGAAGTACGTAACCAATGTGCAAAGGAATGATGAAAAGGATGGGAAAGCAATCTATTCTTCCGGGCCGAAATGCTTTCAATTGAAGTTTGCAGCTGATATGTCTCTCCCGGTTTTTACTGGAGCTCGAATTGAAGGAAGAGATGGTTCCAACTTGAAGGTGGCTTTGATTGACAAACTAAGTGGGGAAATCGTCGATGCTGGACCTCAGTCCTCAGCCAAAGTGGAAATTGTGGTGCTCGAGGGTGATTTTGAGGGCGGAGGTGATAATAATTGCACTATAGAGGGGTTTAAGAATAACATTGTAAGAGAGAGGGAAGGAAAAAAACCACTTCTTACAGGAGATACATTTGTGAATCTCAAAGATGGCATTGGTTTGGTAGGTGAGATATCCTTCTCTGATAATTCAAGCTGGACCAGAAGTCGTAGGTTCAGGCTGGGTGCAAGAATTGTAGACGGCAATGATGGAACAAGAATTCTAGAAGCAAAGACTGCATCATTTGTGGTCAGGGATCACCGTGGAGAATTGTACAAGAAGCACCACCCTCCATCTCTGCAAGACGAAGTGTGGAGATTGCAGAAAATTAGTAAAGATGGAGCCTTTCATAAGCGCCTGAGCCATAAAAACATTGAGACGGTGCAGGATTTCCTAACTCAACTTTATGTATATCCTGCAAGGCTTCGTAATATTCTTGGCCCTGGTATGTCTACCAAAATGTGGGATGCTACAATTGAGCATGCACAAACATGTGTGCTCGATAGGAAGATTTACTTGTATAAACCTCGTGATTTGGAACAGAAAAGCGGCGTGGTTTTTAATGTTGTTGGACAAGTGATGGGGCTACTTTCAGATTACCAGTACGTTCCCATAGATAAGCTATCTGAAACTGAAAAGGCACTCATCTCCTGTGATGCTCACAACTTGGTTATCTCCGCATACGAGCATTGGGAAGAAGTTGACTCTATTGATGATGAAACTTCTCTAGTAGGTGGTTCTTCTCAACCAGTCAGTTTCCTTTACACCCCAAGCTCACCAGCGGAAGACCATTCTTATGGTGGCAAGTACTTGGCTTCTCCAAAATTTAGTGGCTTTGATTTTACACCGTCAAATGCCTATTCTTCTGACCTTATTTCATCGATGGGTTCCATCGGGAGTGCTGGCGGTTTGGATGATCATGCTTTGCAGGGTTTCGATACTATGGTTGTAAGATATGACCAGATTCCAAGTTCCCCAAATTTTGCTCACTCTTCTCTGATCTGCGATTCCGAACCACTAAATTCATCTTTCTATGATGTGGATCATCTCCAAGTTTTAGAGTCTGATGTGCAATGTAGCTCGATTTTAGAAACACAAGCTACACTTCAAGGTGGCCCCTCATCGTGGTCGCGTGCTCAAATTAGATGGACTCAGATATATGGTGTGCTAAGATGGTTCATTTTGATGAGATCTGTTATTAGAAGAAATAAACGCGTATTCGAGAGATTCAACAGTACCGTACAGGGTCGGGGAAAGGAAAAATTGGACTATGGT 1791 43.55 MANTIYCNLHQYHCIVLCLYVSSSPMLSQKRNPDDGDAPADGDNPDDKRRKFSLMSVVRDALSLQSMQQLLEPVIRKVVREEVELALRKYVTNVQRNDEKDGKAIYSSGPKCFQLKFAADMSLPVFTGARIEGRDGSNLKVALIDKLSGEIVDAGPQSSAKVEIVVLEGDFEGGGDNNCTIEGFKNNIVREREGKKPLLTGDTFVNLKDGIGLVGEISFSDNSSWTRSRRFRLGARIVDGNDGTRILEAKTASFVVRDHRGELYKKHHPPSLQDEVWRLQKISKDGAFHKRLSHKNIETVQDFLTQLYVYPARLRNILGPGMSTKMWDATIEHAQTCVLDRKIYLYKPRDLEQKSGVVFNVVGQVMGLLSDYQYVPIDKLSETEKALISCDAHNLVISAYEHWEEVDSIDDETSLVGGSSQPVSFLYTPSSPAEDHSYGGKYLASPKFSGFDFTPSNAYSSDLISSMGSIGSAGGLDDHALQGFDTMVVRYDQIPSSPNFAHSSLICDSEPLNSSFYDVDHLQVLESDVQCSSILETQATLQGGPSSWSRAQIRWTQIYGVLRWFILMRSVIRRNKRVFERFNSTVQGRGKEKLDYG 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1174955 1180910 - MC06g0144 Mch6g0175 689622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0175 597 Pfam Calmodulin binding protein central domain 272 337 IPR046830 -
Mch6g0175 597 MobiDBLite consensus disorder prediction 34 49 - -
Mch6g0175 597 PANTHER OS02G0177800 PROTEIN 37 564 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Mch6g0175 597 Pfam Calmodulin binding protein C-terminal domain 342 408 IPR046829 -
Mch6g0175 597 Pfam Calmodulin binding protein-like N-terminal domain 113 259 IPR046831 -
Mch6g0175 597 MobiDBLite consensus disorder prediction 29 49 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0175 Mch-Chr6:1174955 Mch6g0544 Mch-Chr6:3669799 6.00E-109 dispersed
Mch6g0175 Mch-Chr6:1174955 Mch8g2791 Mch-Chr8:30919145 2.60E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0175 - - - 0.0