Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g0182 ATGGCGACTCCTATTCCCAAACGGCAGCTGTTCATCGGTGGCGAGTGGAGGGAACCAGTTCTCAAGAAACGTATCCCCGTCGTCAACCCCGCTAATGAAGAAATAATCGGATCTATTCCCGCGGCTACTGCGGAAGATGTAGAATTAGCTGTTGATGCTGCCCGGAAAGCCCTTGCGAGGAATAAAGGCAAGGATTGGGCTGCGGCTACGGGGGCTGTGCGCGCCAAATATTTGCGTGCTATTGCTGCTAGGATAACAGAGAGGAAGTCAGAATTGGCAAAGCTTGAAACGATAGACTCTGGAAAACCTCTGGAAGAAGCTGCATGGGACATCGATGATGTTGCTGGGTGCTTCGAATACTATGCAGACCTTGCCGAAGGGTTGGATGCAAAGCAAAAAGCTCCTGTTTCCGTGCCCATGGAGACATTCAAGAGCTACGTTCTTAAAGAACCCATTGGAGTTGTTGGGTTGATTACTCCTTGGAACTATCCTCTATTGATGGCTGCATGGAAAGTTGCACCTGCCTTAGCTGCTGGGTGTGCTGCAATATTGAAGCCATCAGAATTGGCATCTGTCACCTGTTTGGAGCTGGCTGAAATCTGTAAAGACGTTGGTCTTCCACCTGGTATTTTTAATATTCTGACTGGATTCGGCCCAGAAGCTGGTGCTCCTCTAGCATCTCATCCTCATGTTGACAAGATTGCATTTACTGGGAGTGGTGCTACTGGAAGCAAGATTATGACAGCAGCTGCTCAACTTGTCAAGCCTGTGACTATGGAACTTGGTGGAAAAAGTCCGATTGTTGTCTTTGAGGATGTTGACCTCGATAAGGCTGCCGAATGGACGGTCTTTGGTTGCTTTTGGACAAATGGTCAGATTTGCAGTGCCACATCTCGTCTACTTGTACATGAAAACATTGCTGATGAATTTTTGGATAAGCTCGTGCAGTGGTGCAAGAACATTAAGATTTCAGATCCCTTAGAAGAAGGTTGCAGGCTTGGTCCTGTTGTTAGTGCAGGACAGTATGAGAAAGTATTGAAGTTTGTCTCAACTGCTGAGAGCGAAGGGGCAAAGATTCTATTTGGTGGAGTTCGCCCAAAGCACCTAAATAAGGGATACTTCGTTGAACCAGCCATCATTACCAATGTTACAACCTCCATGCAAATATGGAGAGAAGAAGTCTTTGGACCTGTTCTATGTGTTAAGACTTTTAGTTCTGAAGATGAAGCTATTGAATTAGCAAATGATACAATATATGGGCTAGGTGCTGCTGTGATATCGGATGATTTAGAAAGGTGCGAGCGTGTAACCAAGGCTTTACAGGCAGGAATTGTGTGGATTAATTGCTCACAACCATGCTTTACTCAAGCCCCATGGGGAGGCAACAAACGCAGTGGCTTTGGTCGAGAACTAGGGGAATGGGGACTTGATAATTATCTGACTGTAAAGCAGGTTACTCAGTATGTATCCAATGAGCCATGGGGATGGTACAATTCTCCTTCTAAACTGTAA 1512 46.03 MATPIPKRQLFIGGEWREPVLKKRIPVVNPANEEIIGSIPAATAEDVELAVDAARKALARNKGKDWAAATGAVRAKYLRAIAARITERKSELAKLETIDSGKPLEEAAWDIDDVAGCFEYYADLAEGLDAKQKAPVSVPMETFKSYVLKEPIGVVGLITPWNYPLLMAAWKVAPALAAGCAAILKPSELASVTCLELAEICKDVGLPPGIFNILTGFGPEAGAPLASHPHVDKIAFTGSGATGSKIMTAAAQLVKPVTMELGGKSPIVVFEDVDLDKAAEWTVFGCFWTNGQICSATSRLLVHENIADEFLDKLVQWCKNIKISDPLEEGCRLGPVVSAGQYEKVLKFVSTAESEGAKILFGGVRPKHLNKGYFVEPAIITNVTTSMQIWREEVFGPVLCVKTFSSEDEAIELANDTIYGLGAAVISDDLERCERVTKALQAGIVWINCSQPCFTQAPWGGNKRSGFGRELGEWGLDNYLTVKQVTQYVSNEPWGWYNSPSKL 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1220730 1226555 + MC06g0151 Mch6g0182 689629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g0182 503 Pfam Aldehyde dehydrogenase family 17 485 IPR015590 GO:0016491(InterPro)
Mch6g0182 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491(InterPro)
Mch6g0182 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491(InterPro)
Mch6g0182 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620(InterPro)
Mch6g0182 503 CDD ALDH_F10_BADH 27 487 - -
Mch6g0182 503 SUPERFAMILY ALDH-like 5 490 IPR016161 GO:0016491(InterPro)
Mch6g0182 503 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Mch6g0182 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491(InterPro)
Mch6g0182 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 502 - -
Mch6g0182 503 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0182 Mch-Chr6:1220730 Mch6g0791 Mch-Chr6:5504644 4.36E-117 dispersed
Mch6g0182 Mch-Chr6:1220730 Mch6g0160 Mch-Chr6:1068521 1.22E-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g0182 K00130 - csv:101213657 937.176